RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C OST5Q92316 86 aa2.28□□□□□ -2.04
XRN1YGL173C URA2P07259 2214 aaKnown RBP2.28□□□□□ -2.04
XRN1YGL173C BPH1P25356 2167 aa2.28□□□□□ -2.04
XRN1YGL173C SEC16P48415 2195 aaKnown RBP2.28□□□□□ -2.04
XRN1YGL173C YLR285C-AQ3E771 56 aa2.28□□□□□ -2.04
XRN1YGL173C TAR1Q8TGM6 124 aa2.28□□□□□ -2.04
XRN1YGL173C YOS1Q3E834 85 aa2.27□□□□□ -2.05
XRN1YGL173C PAU24P38155 120 aa2.27□□□□□ -2.05
XRN1YGL173C YHR138CP38841 114 aaPredicted RBP2.27□□□□□ -2.05
XRN1YGL173C HUR1P45820 110 aa2.27□□□□□ -2.05
XRN1YGL173C CYT2Q00873 224 aa2.27□□□□□ -2.05
XRN1YGL173C HRT1Q08273 121 aa2.27□□□□□ -2.05
XRN1YGL173C LSM6Q06406 86 aaKnown RBP2.27□□□□□ -2.05
XRN1YGL173C YLR162WQ06235 118 aa2.26□□□□□ -2.05
XRN1YGL173C NCE101Q02820 53 aa2.26□□□□□ -2.05
XRN1YGL173C HSP150P32478 413 aa2.26□□□□□ -2.05
XRN1YGL173C YPR153WQ06537 140 aa2.26□□□□□ -2.05
XRN1YGL173C YPR195CQ06594 109 aa2.26□□□□□ -2.05
XRN1YGL173C GAT4P40569 121 aa2.25□□□□□ -2.05
XRN1YGL173C YGR035W-AQ45U48 73 aa2.25□□□□□ -2.05
XRN1YGL173C RPS22AP0C0W1 130 aaKnown RBP2.25□□□□□ -2.05
XRN1YGL173C PDX3P38075 228 aaKnown RBP2.25□□□□□ -2.05
XRN1YGL173C COA3Q3E7B2 85 aa2.25□□□□□ -2.05
XRN1YGL173C YBR056W-AI2HB52 66 aa2.25□□□□□ -2.05
XRN1YGL173C UBC5P15732 148 aa2.25□□□□□ -2.05
XRN1YGL173C YCR095W-AQ3E787 52 aa2.25□□□□□ -2.05
XRN1YGL173C SIP18P50263 79 aa2.25□□□□□ -2.05
XRN1YGL173C CYR1P08678 2026 aaKnown RBP2.25□□□□□ -2.05
XRN1YGL173C Q0297Q9ZZV8 51 aa2.24□□□□□ -2.05
XRN1YGL173C MRP17P28778 131 aa2.24□□□□□ -2.05
XRN1YGL173C YEL014CP39999 101 aa2.24□□□□□ -2.05
XRN1YGL173C YFR035CP43608 114 aa2.24□□□□□ -2.05
XRN1YGL173C CMC4Q3E7A9 73 aa2.24□□□□□ -2.05
XRN1YGL173C COX23P38824 151 aa2.24□□□□□ -2.05
XRN1YGL173C YER187WP40102 141 aa2.24□□□□□ -2.05
XRN1YGL173C IRC21Q04772 201 aa2.24□□□□□ -2.05
XRN1YGL173C PAU20Q08322 120 aa2.24□□□□□ -2.05
XRN1YGL173C FIT2Q08906 153 aa2.24□□□□□ -2.05
XRN1YGL173C PAU1P0CE88 120 aa2.23□□□□□ -2.05
XRN1YGL173C PAU14P0CE89 120 aa2.23□□□□□ -2.05
XRN1YGL173C PAU6P0CE90 120 aa2.23□□□□□ -2.05
XRN1YGL173C PAU18P0CE91 120 aa2.23□□□□□ -2.05
XRN1YGL173C PAU8P0CE92 120 aa2.23□□□□□ -2.05
XRN1YGL173C PAU11P0CE93 120 aa2.23□□□□□ -2.05
XRN1YGL173C NRG2P38082 220 aa2.23□□□□□ -2.05
XRN1YGL173C PAU13P38725 120 aa2.23□□□□□ -2.05
XRN1YGL173C YEL067CP39978 195 aa2.23□□□□□ -2.05
XRN1YGL173C VPS55P47111 140 aa2.23□□□□□ -2.05
XRN1YGL173C PAU10Q03050 120 aa2.23□□□□□ -2.05
XRN1YGL173C PAU9Q3E770 120 aa2.23□□□□□ -2.05
XRN1YGL173C MVB12P42939 101 aa2.23□□□□□ -2.05
XRN1YGL173C YHR213WP0CI67 198 aa2.22□□□□□ -2.05
XRN1YGL173C RSM18P40033 138 aa2.22□□□□□ -2.05
XRN1YGL173C PAU4P53427 120 aa2.22□□□□□ -2.05
XRN1YGL173C YDL012CQ12489 107 aa2.22□□□□□ -2.05
XRN1YGL173C YGL041C-BQ3E750 60 aa2.22□□□□□ -2.05
XRN1YGL173C PAU5P43575 122 aa2.22□□□□□ -2.05
XRN1YGL173C RPL33AP05744 107 aaKnown RBP2.22□□□□□ -2.05
XRN1YGL173C YGL014C-AP0C5N1 53 aa2.22□□□□□ -2.05
XRN1YGL173C BLM10P43583 2143 aa2.22□□□□□ -2.05
XRN1YGL173C RPS22BQ3E7Y3 130 aaKnown RBP2.22□□□□□ -2.05
XRN1YGL173C EMP24P32803 203 aaKnown RBP2.21□□□□□ -2.06
XRN1YGL173C YOR105WQ08504 108 aa2.21□□□□□ -2.06
XRN1YGL173C YMR122CQ03879 124 aa2.21□□□□□ -2.06
XRN1YGL173C FPR2P32472 135 aa2.21□□□□□ -2.06
XRN1YGL173C YKR045CP36138 183 aa2.21□□□□□ -2.06
XRN1YGL173C YBR027CP38220 110 aa2.21□□□□□ -2.06
XRN1YGL173C YJL027CP47063 138 aaPredicted RBP2.21□□□□□ -2.06
XRN1YGL173C QCR8P08525 94 aa2.2□□□□□ -2.06
XRN1YGL173C YIR020CP40575 100 aa2.2□□□□□ -2.06
XRN1YGL173C BRP1P53194 125 aa2.2□□□□□ -2.06
XRN1YGL173C KSH1Q8TGJ3 72 aa2.2□□□□□ -2.06
XRN1YGL173C IRA2P19158 3079 aa2.2□□□□□ -2.06
XRN1YGL173C NHP2P32495 156 aaPredicted RBP2.2□□□□□ -2.06
XRN1YGL173C YHL037CP38733 133 aa2.2□□□□□ -2.06
XRN1YGL173C SPC1P46965 94 aa2.2□□□□□ -2.06
XRN1YGL173C MIC27P50945 234 aa2.2□□□□□ -2.06
XRN1YGL173C SED1Q01589 338 aa2.2□□□□□ -2.06
XRN1YGL173C PFY1P07274 126 aa2.2□□□□□ -2.06
XRN1YGL173C UBC4P15731 148 aa2.2□□□□□ -2.06
XRN1YGL173C YNL146C-AQ3E7Z1 64 aa2.2□□□□□ -2.06
XRN1YGL173C YOL118CQ08259 102 aa2.19□□□□□ -2.06
XRN1YGL173C PAI3P01094 68 aa2.19□□□□□ -2.06
XRN1YGL173C ATX1P38636 73 aa2.18□□□□□ -2.06
XRN1YGL173C YPL038W-AQ3E7B4 63 aa2.18□□□□□ -2.06
XRN1YGL173C TIM12P32830 109 aa2.18□□□□□ -2.06
XRN1YGL173C COA4Q05809 96 aa2.18□□□□□ -2.06
XRN1YGL173C PRM3Q08931 133 aa2.18□□□□□ -2.06
XRN1YGL173C ROX3P25046 220 aa2.17□□□□□ -2.06
XRN1YGL173C AIM4P38305 123 aaPredicted RBP2.17□□□□□ -2.06
XRN1YGL173C PRM7Q12459 698 aa2.17□□□□□ -2.06
XRN1YGL173C CSF1Q12150 2958 aa2.17□□□□□ -2.06
XRN1YGL173C YCL048W-AQ2V2Q2 79 aa2.17□□□□□ -2.06
XRN1YGL173C YIL163CP40448 117 aa2.16□□□□□ -2.06
XRN1YGL173C LCL2Q08045 131 aa2.16□□□□□ -2.06
XRN1YGL173C YEL008WP40001 126 aa2.16□□□□□ -2.06
XRN1YGL173C POR2P40478 281 aa2.16□□□□□ -2.06
XRN1YGL173C IRA1P18963 3092 aa2.16□□□□□ -2.06
XRN1YGL173C VAM10Q08474 114 aa2.15□□□□□ -2.06
XRN1YGL173C LST8P41318 303 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms