RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W Q0032Q9ZZX7 96 aa-0.28□□□□□ -2.45
LSM4YER112W RGI1P40043 161 aaPredicted RBP-0.29□□□□□ -2.46
LSM4YER112W NHP10Q03435 203 aa-0.29□□□□□ -2.46
LSM4YER112W TY1B-PR2P0C2J0 1756 aa-0.29□□□□□ -2.46
LSM4YER112W KSH1Q8TGJ3 72 aa-0.31□□□□□ -2.46
LSM4YER112W REV3P14284 1504 aa-0.32□□□□□ -2.46
LSM4YER112W GEA2P39993 1459 aaKnown RBP-0.32□□□□□ -2.46
LSM4YER112W HMRA1P0CY11 126 aa-0.32□□□□□ -2.46
LSM4YER112W HKR1P41809 1802 aa-0.33□□□□□ -2.46
LSM4YER112W TY1B-DR6P0C2I3 1755 aa-0.35□□□□□ -2.47
LSM4YER112W TY1B-LR2P0C2I5 1755 aa-0.35□□□□□ -2.47
LSM4YER112W TY1B-JR2P47100 1755 aaKnown RBP-0.35□□□□□ -2.47
LSM4YER112W TY1B-MR1Q04214 1755 aa-0.35□□□□□ -2.47
LSM4YER112W TY1B-MR2Q04670 1755 aaKnown RBP-0.35□□□□□ -2.47
LSM4YER112W TY1B-NL1Q12112 1755 aa-0.35□□□□□ -2.47
LSM4YER112W TY1B-GR1Q12141 1755 aa-0.35□□□□□ -2.47
LSM4YER112W TY1B-GR3Q12316 1755 aa-0.35□□□□□ -2.47
LSM4YER112W TY1B-PLQ12414 1755 aaKnown RBP-0.35□□□□□ -2.47
LSM4YER112W TY1B-ORQ92393 1755 aa-0.35□□□□□ -2.47
LSM4YER112W SNU13P39990 126 aaKnown RBP-0.36□□□□□ -2.47
LSM4YER112W YBR201C-AQ2V2Q3 67 aa-0.36□□□□□ -2.47
LSM4YER112W TOM6P33448 61 aa-0.37□□□□□ -2.47
LSM4YER112W RPA190P10964 1664 aaKnown RBP-0.37□□□□□ -2.47
LSM4YER112W BSC4P53841 131 aa-0.4□□□□□ -2.47
LSM4YER112W YDR381C-AQ3E6R5 114 aa-0.4□□□□□ -2.47
LSM4YER112W SEN1Q00416 2231 aaKnown RBP-0.42□□□□□ -2.48
LSM4YER112W RRT15Q3E811 62 aa-0.42□□□□□ -2.48
LSM4YER112W YHR214C-DP0CX93 97 aa-0.43□□□□□ -2.48
LSM4YER112W YCR108CQ3E819 63 aa-0.43□□□□□ -2.48
LSM4YER112W BPH1P25356 2167 aa-0.44□□□□□ -2.48
LSM4YER112W YGR025WP53216 100 aa-0.44□□□□□ -2.48
LSM4YER112W YDR029WQ12111 104 aa-0.45□□□□□ -2.48
LSM4YER112W SDH6Q3E785 79 aa-0.45□□□□□ -2.48
LSM4YER112W MSL1P40567 111 aaPredicted RBP-0.46□□□□□ -2.48
LSM4YER112W MOT1P32333 1867 aa-0.46□□□□□ -2.48
LSM4YER112W YMR122W-AQ3E842 84 aa-0.47□□□□□ -2.48
LSM4YER112W ECM29P38737 1868 aa-0.48□□□□□ -2.49
LSM4YER112W ATP18P81450 59 aa-0.48□□□□□ -2.49
LSM4YER112W UTP20P35194 2493 aaKnown RBP-0.48□□□□□ -2.49
LSM4YER112W MHF2Q3E829 80 aa-0.49□□□□□ -2.49
LSM4YER112W SUS1Q6WNK7 96 aa-0.49□□□□□ -2.49
LSM4YER112W STT4P37297 1900 aa-0.49□□□□□ -2.49
LSM4YER112W PMD1P32634 1753 aa-0.5□□□□□ -2.49
LSM4YER112W YAL065CO13511 128 aa-0.5□□□□□ -2.49
LSM4YER112W FYV7Q12247 151 aa-0.5□□□□□ -2.49
LSM4YER112W TY1B-DR5P0C2I2 1755 aa-0.5□□□□□ -2.49
LSM4YER112W TY1B-PR1P0C2I9 1755 aaKnown RBP-0.5□□□□□ -2.49
LSM4YER112W TY1B-JR1P47098 1755 aa-0.5□□□□□ -2.49
LSM4YER112W TY1B-ML2Q03434 1755 aaKnown RBP-0.5□□□□□ -2.49
LSM4YER112W TY1B-ER1Q03612 1755 aa-0.5□□□□□ -2.49
LSM4YER112W TY1B-ER2Q03619 1755 aa-0.5□□□□□ -2.49
LSM4YER112W TY1B-DR1Q03855 1755 aa-0.5□□□□□ -2.49
LSM4YER112W TY1B-ML1Q04711 1755 aaKnown RBP-0.5□□□□□ -2.49
LSM4YER112W TY1B-LR1Q12088 1755 aaKnown RBP-0.5□□□□□ -2.49
LSM4YER112W TY1B-GR2Q12269 1755 aa-0.5□□□□□ -2.49
LSM4YER112W TY1B-OLQ12273 1755 aa-0.5□□□□□ -2.49
LSM4YER112W TY1B-DR3Q99231 1755 aa-0.5□□□□□ -2.49
LSM4YER112W POL1P13382 1468 aa-0.54□□□□□ -2.5
LSM4YER112W EDC1P53080 175 aaPredicted RBP-0.55□□□□□ -2.5
LSM4YER112W YDR246W-AQ3E763 66 aa-0.55□□□□□ -2.5
LSM4YER112W YDR042CQ03205 200 aa-0.56□□□□□ -2.5
LSM4YER112W FPR2P32472 135 aa-0.57□□□□□ -2.5
LSM4YER112W NHP2P32495 156 aaPredicted RBP-0.57□□□□□ -2.5
LSM4YER112W ECM12O13529 151 aa-0.58□□□□□ -2.5
LSM4YER112W YCR085WP25650 117 aa-0.58□□□□□ -2.5
LSM4YER112W GDB1Q06625 1536 aa-0.59□□□□□ -2.5
LSM4YER112W SWR1Q05471 1514 aa-0.59□□□□□ -2.5
LSM4YER112W YKL068W-AQ3E826 78 aa-0.6□□□□□ -2.51
LSM4YER112W YPR108W-AQ3E7B3 70 aa-0.61□□□□□ -2.51
LSM4YER112W YBR032WP38223 100 aa-0.62□□□□□ -2.51
LSM4YER112W PAU23Q07987 124 aa-0.62□□□□□ -2.51
LSM4YER112W PAU17Q12370 124 aa-0.62□□□□□ -2.51
LSM4YER112W ZEO1Q08245 113 aa-0.63□□□□□ -2.51
LSM4YER112W YBL044WP38194 122 aa-0.65□□□□□ -2.51
LSM4YER112W SCP1Q08873 200 aa-0.65□□□□□ -2.51
LSM4YER112W YOL097W-AQ3E7Y9 61 aa-0.65□□□□□ -2.51
LSM4YER112W XRN1P22147 1528 aaKnown RBP-0.66□□□□□ -2.52
LSM4YER112W MMS1Q06211 1407 aa-0.66□□□□□ -2.52
LSM4YER112W PDR10P51533 1564 aa-0.67□□□□□ -2.52
LSM4YER112W UTP10P42945 1769 aaKnown RBP-0.68□□□□□ -2.52
LSM4YER112W YCL001W-BQ96VH2 84 aa-0.71□□□□□ -2.52
LSM4YER112W RPS29AP41057 56 aaKnown RBP-0.72□□□□□ -2.52
LSM4YER112W NOP10Q6Q547 58 aaPredicted RBP-0.73□□□□□ -2.53
LSM4YER112W YPL225WQ08971 146 aaKnown RBP-0.77□□□□□ -2.53
LSM4YER112W YOR343CQ12484 108 aa-0.78□□□□□ -2.53
LSM4YER112W YMR082CQ04276 118 aa-0.8□□□□□ -2.54
LSM4YER112W YIL156W-BQ2V2P4 73 aa-0.82□□□□□ -2.54
LSM4YER112W YMR001C-AQ8TGS9 76 aa-0.82□□□□□ -2.54
LSM4YER112W APC1P53886 1748 aa-0.83□□□□□ -2.54
LSM4YER112W YCR075W-AQ3E830 75 aa-0.83□□□□□ -2.54
LSM4YER112W TY2B-LR1P0C2J3 1770 aa-0.85□□□□□ -2.55
LSM4YER112W TY2B-FP0CX63 1770 aa-0.85□□□□□ -2.55
LSM4YER112W TY2B-GR2P0CX64 1770 aa-0.85□□□□□ -2.55
LSM4YER112W TY2B-CP25384 1770 aa-0.85□□□□□ -2.55
LSM4YER112W TY2B-DR2Q03494 1770 aa-0.85□□□□□ -2.55
LSM4YER112W TY2B-DR3Q07791 1770 aaKnown RBP-0.85□□□□□ -2.55
LSM4YER112W TY2B-OR1Q12113 1770 aa-0.85□□□□□ -2.55
LSM4YER112W TY2B-DR1Q12472 1770 aa-0.85□□□□□ -2.55
LSM4YER112W TY2B-BQ12491 1770 aa-0.85□□□□□ -2.55
LSM4YER112W TY2B-OR2Q12501 1770 aa-0.85□□□□□ -2.55
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms