RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C SGF11Q03067 99 aa0.2□□□□□ -2.38
VAB2YEL005C YNL042W-BQ3E7Z2 85 aa0.2□□□□□ -2.38
VAB2YEL005C YIL134C-AQ45U18 67 aa0.2□□□□□ -2.38
VAB2YEL005C RSF2P46974 1380 aa0.19□□□□□ -2.38
VAB2YEL005C Q0032Q9ZZX7 96 aa0.19□□□□□ -2.38
VAB2YEL005C MSL1P40567 111 aaPredicted RBP0.16□□□□□ -2.38
VAB2YEL005C SUS1Q6WNK7 96 aa0.16□□□□□ -2.38
VAB2YEL005C BSC4P53841 131 aa0.15□□□□□ -2.39
VAB2YEL005C TOM6P33448 61 aa0.14□□□□□ -2.39
VAB2YEL005C YDR029WQ12111 104 aa0.14□□□□□ -2.39
VAB2YEL005C RRT15Q3E811 62 aa0.14□□□□□ -2.39
VAB2YEL005C MHF2Q3E829 80 aa0.14□□□□□ -2.39
VAB2YEL005C TY1B-BRQ12193 1756 aa0.14□□□□□ -2.39
VAB2YEL005C YBR201C-AQ2V2Q3 67 aa0.13□□□□□ -2.39
VAB2YEL005C RPA190P10964 1664 aaKnown RBP0.13□□□□□ -2.39
VAB2YEL005C DNF3Q12674 1656 aa0.12□□□□□ -2.39
VAB2YEL005C YHR214C-DP0CX93 97 aa0.12□□□□□ -2.39
VAB2YEL005C ZEO1Q08245 113 aa0.12□□□□□ -2.39
VAB2YEL005C SDH6Q3E785 79 aa0.08□□□□□ -2.4
VAB2YEL005C YDR042CQ03205 200 aa0.07□□□□□ -2.4
VAB2YEL005C YAL065CO13511 128 aa0.06□□□□□ -2.4
VAB2YEL005C ATP18P81450 59 aa0.06□□□□□ -2.4
VAB2YEL005C YPL225WQ08971 146 aaKnown RBP0.06□□□□□ -2.4
VAB2YEL005C YMR122W-AQ3E842 84 aa0.06□□□□□ -2.4
VAB2YEL005C TY1B-LR3P0C2I6 1755 aaKnown RBP0.05□□□□□ -2.4
VAB2YEL005C TY1B-PR3P0C2J1 1755 aaKnown RBP0.05□□□□□ -2.4
VAB2YEL005C NHP2P32495 156 aaPredicted RBP0.05□□□□□ -2.4
VAB2YEL005C YDR381C-AQ3E6R5 114 aa0.05□□□□□ -2.4
VAB2YEL005C TY1B-PR2P0C2J0 1756 aa0.04□□□□□ -2.4
VAB2YEL005C FPR2P32472 135 aa0.04□□□□□ -2.4
VAB2YEL005C HKR1P41809 1802 aa0.03□□□□□ -2.4
VAB2YEL005C YKL068W-AQ3E826 78 aa0.03□□□□□ -2.4
VAB2YEL005C POL1P13382 1468 aa0.03□□□□□ -2.41
VAB2YEL005C SWR1Q05471 1514 aa0.03□□□□□ -2.41
VAB2YEL005C GDB1Q06625 1536 aa0.03□□□□□ -2.41
VAB2YEL005C YGR025WP53216 100 aa0.02□□□□□ -2.41
VAB2YEL005C YCL001W-BQ96VH2 84 aa0.02□□□□□ -2.41
VAB2YEL005C TY1B-DR6P0C2I3 1755 aa0.01□□□□□ -2.41
VAB2YEL005C TY1B-LR2P0C2I5 1755 aa0.01□□□□□ -2.41
VAB2YEL005C TY1B-JR2P47100 1755 aaKnown RBP0.01□□□□□ -2.41
VAB2YEL005C TY1B-MR1Q04214 1755 aa0.01□□□□□ -2.41
VAB2YEL005C TY1B-MR2Q04670 1755 aaKnown RBP0.01□□□□□ -2.41
VAB2YEL005C TY1B-NL1Q12112 1755 aa0.01□□□□□ -2.41
VAB2YEL005C TY1B-GR1Q12141 1755 aa0.01□□□□□ -2.41
VAB2YEL005C TY1B-GR3Q12316 1755 aa0.01□□□□□ -2.41
VAB2YEL005C TY1B-PLQ12414 1755 aaKnown RBP0.01□□□□□ -2.41
VAB2YEL005C TY1B-ORQ92393 1755 aa0.01□□□□□ -2.41
VAB2YEL005C SCP1Q08873 200 aa0□□□□□ -2.41
VAB2YEL005C YCR085WP25650 117 aa-0.01□□□□□ -2.41
VAB2YEL005C PAU23Q07987 124 aa-0.01□□□□□ -2.41
VAB2YEL005C PAU17Q12370 124 aa-0.01□□□□□ -2.41
VAB2YEL005C EDC1P53080 175 aaPredicted RBP-0.02□□□□□ -2.41
VAB2YEL005C YCR108CQ3E819 63 aa-0.02□□□□□ -2.41
VAB2YEL005C YPR108W-AQ3E7B3 70 aa-0.03□□□□□ -2.41
VAB2YEL005C PDR10P51533 1564 aa-0.03□□□□□ -2.41
VAB2YEL005C ECM12O13529 151 aa-0.04□□□□□ -2.42
VAB2YEL005C YBR032WP38223 100 aa-0.04□□□□□ -2.42
VAB2YEL005C YOL097W-AQ3E7Y9 61 aa-0.04□□□□□ -2.42
VAB2YEL005C MOT1P32333 1867 aa-0.04□□□□□ -2.42
VAB2YEL005C ECM29P38737 1868 aa-0.05□□□□□ -2.42
VAB2YEL005C BPH1P25356 2167 aa-0.06□□□□□ -2.42
VAB2YEL005C STT4P37297 1900 aa-0.07□□□□□ -2.42
VAB2YEL005C YCR075W-AQ3E830 75 aa-0.07□□□□□ -2.42
VAB2YEL005C YMR082CQ04276 118 aa-0.08□□□□□ -2.42
VAB2YEL005C YOR343CQ12484 108 aa-0.08□□□□□ -2.42
VAB2YEL005C YDR246W-AQ3E763 66 aa-0.08□□□□□ -2.42
VAB2YEL005C NOP10Q6Q547 58 aaPredicted RBP-0.09□□□□□ -2.42
VAB2YEL005C TY1B-DR5P0C2I2 1755 aa-0.09□□□□□ -2.42
VAB2YEL005C TY1B-PR1P0C2I9 1755 aaKnown RBP-0.09□□□□□ -2.42
VAB2YEL005C TY1B-JR1P47098 1755 aa-0.09□□□□□ -2.42
VAB2YEL005C TY1B-ML2Q03434 1755 aaKnown RBP-0.09□□□□□ -2.42
VAB2YEL005C TY1B-ER1Q03612 1755 aa-0.09□□□□□ -2.42
VAB2YEL005C TY1B-ER2Q03619 1755 aa-0.09□□□□□ -2.42
VAB2YEL005C TY1B-DR1Q03855 1755 aa-0.09□□□□□ -2.42
VAB2YEL005C TY1B-ML1Q04711 1755 aaKnown RBP-0.09□□□□□ -2.42
VAB2YEL005C TY1B-LR1Q12088 1755 aaKnown RBP-0.09□□□□□ -2.42
VAB2YEL005C TY1B-GR2Q12269 1755 aa-0.09□□□□□ -2.42
VAB2YEL005C TY1B-OLQ12273 1755 aa-0.09□□□□□ -2.42
VAB2YEL005C TY1B-DR3Q99231 1755 aa-0.09□□□□□ -2.42
VAB2YEL005C SEN1Q00416 2231 aaKnown RBP-0.1□□□□□ -2.43
VAB2YEL005C XRN1P22147 1528 aaKnown RBP-0.11□□□□□ -2.43
VAB2YEL005C YBL044WP38194 122 aa-0.13□□□□□ -2.43
VAB2YEL005C YOR105WQ08504 108 aa-0.13□□□□□ -2.43
VAB2YEL005C MMS1Q06211 1407 aa-0.13□□□□□ -2.43
VAB2YEL005C PMD1P32634 1753 aa-0.14□□□□□ -2.43
VAB2YEL005C YMR175W-AQ3E766 64 aa-0.14□□□□□ -2.43
VAB2YEL005C YIL156W-BQ2V2P4 73 aa-0.16□□□□□ -2.44
VAB2YEL005C UTP10P42945 1769 aaKnown RBP-0.17□□□□□ -2.44
VAB2YEL005C YKL065W-AQ2V2P2 73 aa-0.18□□□□□ -2.44
VAB2YEL005C UTP20P35194 2493 aaKnown RBP-0.19□□□□□ -2.44
VAB2YEL005C LTE1P07866 1435 aa-0.21□□□□□ -2.44
VAB2YEL005C YGL194C-AQ2V2P6 80 aa-0.22□□□□□ -2.44
VAB2YEL005C RPS29AP41057 56 aaKnown RBP-0.23□□□□□ -2.45
VAB2YEL005C YOR314WQ12506 109 aa-0.24□□□□□ -2.45
VAB2YEL005C YMR001C-AQ8TGS9 76 aa-0.25□□□□□ -2.45
VAB2YEL005C APC1P53886 1748 aa-0.25□□□□□ -2.45
VAB2YEL005C CWP2P43497 92 aa-0.26□□□□□ -2.45
VAB2YEL005C POC4Q12245 148 aaPredicted RBP-0.27□□□□□ -2.45
VAB2YEL005C ESC1Q03661 1658 aaKnown RBP-0.27□□□□□ -2.45
VAB2YEL005C MMS22Q06164 1454 aa-0.28□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms