RNA–Protein interactions for RNA: YDL136W

RPL35B, Transcript of Ribosomal 60S subunit protein L35B, yeastyeast

Gene RPL35B, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL35BYDL136W TY1B-BRQ12193 1756 aa0.3□□□□□ -2.36
RPL35BYDL136W SNU13P39990 126 aaKnown RBP0.3□□□□□ -2.36
RPL35BYDL136W RPL38P49167 78 aaKnown RBP0.3□□□□□ -2.36
RPL35BYDL136W ZEO1Q08245 113 aa0.3□□□□□ -2.36
RPL35BYDL136W DNF3Q12674 1656 aa0.3□□□□□ -2.36
RPL35BYDL136W YDR042CQ03205 200 aa0.29□□□□□ -2.36
RPL35BYDL136W YBR201C-AQ2V2Q3 67 aa0.28□□□□□ -2.36
RPL35BYDL136W POL1P13382 1468 aa0.28□□□□□ -2.37
RPL35BYDL136W COX7P10174 60 aa0.27□□□□□ -2.37
RPL35BYDL136W BSC4P53841 131 aa0.26□□□□□ -2.37
RPL35BYDL136W YPL225WQ08971 146 aaKnown RBP0.26□□□□□ -2.37
RPL35BYDL136W YDR029WQ12111 104 aa0.26□□□□□ -2.37
RPL35BYDL136W SUS1Q6WNK7 96 aa0.26□□□□□ -2.37
RPL35BYDL136W ATX1P38636 73 aa0.25□□□□□ -2.37
RPL35BYDL136W NHP2P32495 156 aaPredicted RBP0.24□□□□□ -2.37
RPL35BYDL136W PDR10P51533 1564 aa0.23□□□□□ -2.37
RPL35BYDL136W GDB1Q06625 1536 aa0.23□□□□□ -2.37
RPL35BYDL136W PDX3P38075 228 aaKnown RBP0.22□□□□□ -2.37
RPL35BYDL136W YIL134C-AQ45U18 67 aa0.22□□□□□ -2.37
RPL35BYDL136W MHF2Q3E829 80 aa0.2□□□□□ -2.38
RPL35BYDL136W YMR122W-AQ3E842 84 aa0.2□□□□□ -2.38
RPL35BYDL136W TY1B-PR2P0C2J0 1756 aa0.18□□□□□ -2.38
RPL35BYDL136W TOM6P33448 61 aa0.17□□□□□ -2.38
RPL35BYDL136W YCR075W-AQ3E830 75 aa0.17□□□□□ -2.38
RPL35BYDL136W SWR1Q05471 1514 aa0.17□□□□□ -2.38
RPL35BYDL136W YAL065CO13511 128 aa0.16□□□□□ -2.38
RPL35BYDL136W SGF11Q03067 99 aa0.16□□□□□ -2.38
RPL35BYDL136W SCP1Q08873 200 aa0.16□□□□□ -2.38
RPL35BYDL136W YHR214C-DP0CX93 97 aa0.15□□□□□ -2.39
RPL35BYDL136W YMR082CQ04276 118 aa0.15□□□□□ -2.39
RPL35BYDL136W TY1B-DR6P0C2I3 1755 aa0.14□□□□□ -2.39
RPL35BYDL136W TY1B-LR2P0C2I5 1755 aa0.14□□□□□ -2.39
RPL35BYDL136W TY1B-PR3P0C2J1 1755 aaKnown RBP0.14□□□□□ -2.39
RPL35BYDL136W TY1B-JR2P47100 1755 aaKnown RBP0.14□□□□□ -2.39
RPL35BYDL136W TY1B-MR1Q04214 1755 aa0.14□□□□□ -2.39
RPL35BYDL136W TY1B-MR2Q04670 1755 aaKnown RBP0.14□□□□□ -2.39
RPL35BYDL136W TY1B-NL1Q12112 1755 aa0.14□□□□□ -2.39
RPL35BYDL136W TY1B-GR1Q12141 1755 aa0.14□□□□□ -2.39
RPL35BYDL136W TY1B-GR3Q12316 1755 aa0.14□□□□□ -2.39
RPL35BYDL136W TY1B-PLQ12414 1755 aaKnown RBP0.14□□□□□ -2.39
RPL35BYDL136W TY1B-ORQ92393 1755 aa0.14□□□□□ -2.39
RPL35BYDL136W TY1B-LR3P0C2I6 1755 aaKnown RBP0.14□□□□□ -2.39
RPL35BYDL136W PAU23Q07987 124 aa0.13□□□□□ -2.39
RPL35BYDL136W PAU17Q12370 124 aa0.13□□□□□ -2.39
RPL35BYDL136W HKR1P41809 1802 aa0.13□□□□□ -2.39
RPL35BYDL136W ECM29P38737 1868 aa0.12□□□□□ -2.39
RPL35BYDL136W FPR2P32472 135 aa0.12□□□□□ -2.39
RPL35BYDL136W ATP18P81450 59 aa0.12□□□□□ -2.39
RPL35BYDL136W SDH6Q3E785 79 aa0.11□□□□□ -2.39
RPL35BYDL136W YCL001W-BQ96VH2 84 aa0.11□□□□□ -2.39
RPL35BYDL136W ECM12O13529 151 aa0.1□□□□□ -2.39
RPL35BYDL136W STT4P37297 1900 aa0.07□□□□□ -2.4
RPL35BYDL136W YMR175W-AQ3E766 64 aa0.07□□□□□ -2.4
RPL35BYDL136W NOP10Q6Q547 58 aaPredicted RBP0.04□□□□□ -2.4
RPL35BYDL136W MOT1P32333 1867 aa0.03□□□□□ -2.41
RPL35BYDL136W YDR381C-AQ3E6R5 114 aa0.02□□□□□ -2.41
RPL35BYDL136W YIL156W-BQ2V2P4 73 aa0.01□□□□□ -2.41
RPL35BYDL136W YGL194C-AQ2V2P6 80 aa0.01□□□□□ -2.41
RPL35BYDL136W YCR108CQ3E819 63 aa0.01□□□□□ -2.41
RPL35BYDL136W CSF1Q12150 2958 aa0.01□□□□□ -2.41
RPL35BYDL136W TY1B-DR5P0C2I2 1755 aa0.01□□□□□ -2.41
RPL35BYDL136W TY1B-PR1P0C2I9 1755 aaKnown RBP0.01□□□□□ -2.41
RPL35BYDL136W TY1B-ER2Q03619 1755 aa0.01□□□□□ -2.41
RPL35BYDL136W TY1B-DR1Q03855 1755 aa0.01□□□□□ -2.41
RPL35BYDL136W TY1B-ML1Q04711 1755 aaKnown RBP0.01□□□□□ -2.41
RPL35BYDL136W TY1B-LR1Q12088 1755 aaKnown RBP0.01□□□□□ -2.41
RPL35BYDL136W TY1B-GR2Q12269 1755 aa0.01□□□□□ -2.41
RPL35BYDL136W TEL1P38110 2787 aa0□□□□□ -2.41
RPL35BYDL136W YBR056W-AI2HB52 66 aa0□□□□□ -2.41
RPL35BYDL136W SEN1Q00416 2231 aaKnown RBP0□□□□□ -2.41
RPL35BYDL136W YOR343CQ12484 108 aa0□□□□□ -2.41
RPL35BYDL136W YPR108W-AQ3E7B3 70 aa0□□□□□ -2.41
RPL35BYDL136W BPH1P25356 2167 aa-0.01□□□□□ -2.41
RPL35BYDL136W UTP10P42945 1769 aaKnown RBP-0.01□□□□□ -2.41
RPL35BYDL136W TY1B-JR1P47098 1755 aa-0.01□□□□□ -2.41
RPL35BYDL136W TY1B-ML2Q03434 1755 aaKnown RBP-0.01□□□□□ -2.41
RPL35BYDL136W TY1B-ER1Q03612 1755 aa-0.01□□□□□ -2.41
RPL35BYDL136W TY1B-OLQ12273 1755 aa-0.01□□□□□ -2.41
RPL35BYDL136W TY1B-DR3Q99231 1755 aa-0.01□□□□□ -2.41
RPL35BYDL136W YCR085WP25650 117 aa-0.01□□□□□ -2.41
RPL35BYDL136W XRN1P22147 1528 aaKnown RBP-0.02□□□□□ -2.41
RPL35BYDL136W IRA2P19158 3079 aa-0.03□□□□□ -2.41
RPL35BYDL136W YSP2Q06681 1438 aa-0.04□□□□□ -2.42
RPL35BYDL136W EDC1P53080 175 aaPredicted RBP-0.04□□□□□ -2.42
RPL35BYDL136W YGR025WP53216 100 aa-0.04□□□□□ -2.42
RPL35BYDL136W GCN1P33892 2672 aaKnown RBP-0.04□□□□□ -2.42
RPL35BYDL136W MDN1Q12019 4910 aaKnown RBP-0.05□□□□□ -2.42
RPL35BYDL136W FMP27Q06179 2628 aa-0.05□□□□□ -2.42
RPL35BYDL136W UTP20P35194 2493 aaKnown RBP-0.05□□□□□ -2.42
RPL35BYDL136W VPS13Q07878 3144 aa-0.05□□□□□ -2.42
RPL35BYDL136W MLP1Q02455 1875 aaKnown RBP-0.05□□□□□ -2.42
RPL35BYDL136W PMD1P32634 1753 aa-0.06□□□□□ -2.42
RPL35BYDL136W DYN1P36022 4092 aa-0.06□□□□□ -2.42
RPL35BYDL136W YBR032WP38223 100 aa-0.06□□□□□ -2.42
RPL35BYDL136W YKL068W-AQ3E826 78 aa-0.06□□□□□ -2.42
RPL35BYDL136W TRA1P38811 3744 aa-0.07□□□□□ -2.42
RPL35BYDL136W IRA1P18963 3092 aa-0.07□□□□□ -2.42
RPL35BYDL136W YOL097W-AQ3E7Y9 61 aa-0.07□□□□□ -2.42
RPL35BYDL136W TY2B-LR1P0C2J3 1770 aa-0.07□□□□□ -2.42
RPL35BYDL136W TY2B-FP0CX63 1770 aa-0.07□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms