RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	PAU17	Q12370	124 aa		0.91	□□□□□ -2.26
PBP4	YDL053C	FPR2	P32472	135 aa		0.9	□□□□□ -2.27
PBP4	YDL053C	PDX3	P38075	228 aa	Known RBP	0.9	□□□□□ -2.27
PBP4	YDL053C	YBR292C	P38357	123 aa		0.9	□□□□□ -2.27
PBP4	YDL053C	ATX1	P38636	73 aa		0.9	□□□□□ -2.27
PBP4	YDL053C	HHY1	P39982	102 aa		0.9	□□□□□ -2.27
PBP4	YDL053C	YDR010C	Q12426	110 aa		0.9	□□□□□ -2.27
PBP4	YDL053C	YOR314W	Q12506	109 aa		0.9	□□□□□ -2.27
PBP4	YDL053C	YKL065W-A	Q2V2P2	73 aa		0.9	□□□□□ -2.27
PBP4	YDL053C	YDR119W-A	Q2V2P9	66 aa		0.9	□□□□□ -2.27
PBP4	YDL053C	COX19	Q3E731	98 aa		0.9	□□□□□ -2.27
PBP4	YDL053C	YRF1-1	P0CX20	1796 aa		0.9	□□□□□ -2.27
PBP4	YDL053C	YRF1-5	P0CX21	1796 aa		0.9	□□□□□ -2.27
PBP4	YDL053C	YRF1-8	P0CX22	1796 aa		0.9	□□□□□ -2.27
PBP4	YDL053C	YRF1-2	P40105	1681 aa		0.89	□□□□□ -2.27
PBP4	YDL053C	SWM2	P40342	146 aa		0.89	□□□□□ -2.27
PBP4	YDL053C	NUP159	P40477	1460 aa		0.88	□□□□□ -2.27
PBP4	YDL053C	MMS22	Q06164	1454 aa		0.88	□□□□□ -2.27
PBP4	YDL053C	YHR213W-B	Q8TGK1	99 aa		0.88	□□□□□ -2.27
PBP4	YDL053C	TY1B-NL2	Q99337	1749 aa	Known RBP	0.88	□□□□□ -2.27
PBP4	YDL053C	ESP1	Q03018	1630 aa		0.88	□□□□□ -2.27
PBP4	YDL053C	URB1	P34241	1764 aa	Known RBP	0.88	□□□□□ -2.27
PBP4	YDL053C	SEC16	P48415	2195 aa	Known RBP	0.87	□□□□□ -2.27
PBP4	YDL053C	YAL065C	O13511	128 aa		0.87	□□□□□ -2.27
PBP4	YDL053C	TIM12	P32830	109 aa		0.87	□□□□□ -2.27
PBP4	YDL053C	YHR173C	P38864	112 aa		0.87	□□□□□ -2.27
PBP4	YDL053C	YMR141C	P40211	102 aa		0.87	□□□□□ -2.27
PBP4	YDL053C	YIL156W-B	Q2V2P4	73 aa		0.87	□□□□□ -2.27
PBP4	YDL053C	YNL042W-B	Q3E7Z2	85 aa		0.87	□□□□□ -2.27
PBP4	YDL053C	NOP10	Q6Q547	58 aa	Predicted RBP	0.87	□□□□□ -2.27
PBP4	YDL053C	NTE1	Q04958	1679 aa		0.87	□□□□□ -2.27
PBP4	YDL053C	QCR9	P22289	66 aa		0.86	□□□□□ -2.27
PBP4	YDL053C	YFL041W-A	Q3E817	63 aa		0.86	□□□□□ -2.27
PBP4	YDL053C	SIN3	P22579	1536 aa		0.85	□□□□□ -2.27
PBP4	YDL053C	SSS1	P35179	80 aa		0.85	□□□□□ -2.27
PBP4	YDL053C	YBR201C-A	Q2V2Q3	67 aa		0.85	□□□□□ -2.27
PBP4	YDL053C	YGR121W-A	Q3E816	71 aa		0.85	□□□□□ -2.27
PBP4	YDL053C	YMR122W-A	Q3E842	84 aa		0.85	□□□□□ -2.27
PBP4	YDL053C	Q0032	Q9ZZX7	96 aa		0.85	□□□□□ -2.27
PBP4	YDL053C	POL2	P21951	2222 aa	Known RBP	0.85	□□□□□ -2.27
PBP4	YDL053C	UFD4	P33202	1483 aa		0.85	□□□□□ -2.27
PBP4	YDL053C	TY4B-H	P0C2J7	1802 aa		0.85	□□□□□ -2.27
PBP4	YDL053C	FAS2	P19097	1887 aa	Known RBP	0.84	□□□□□ -2.27
PBP4	YDL053C	ECM29	P38737	1868 aa		0.84	□□□□□ -2.27
PBP4	YDL053C	TY1B-DR1	Q03855	1755 aa		0.84	□□□□□ -2.27
PBP4	YDL053C	TY1B-DR3	Q99231	1755 aa		0.84	□□□□□ -2.27
PBP4	YDL053C	YFR010W-A	P0C5N0	62 aa		0.84	□□□□□ -2.27
PBP4	YDL053C	YOL131W	Q08270	108 aa		0.84	□□□□□ -2.27
PBP4	YDL053C	YOR034C-A	Q3E735	80 aa		0.84	□□□□□ -2.27
PBP4	YDL053C	YBR072C-A	Q3E794	53 aa		0.84	□□□□□ -2.27
PBP4	YDL053C	ATP18	P81450	59 aa		0.83	□□□□□ -2.28
PBP4	YDL053C	YGR035W-A	Q45U48	73 aa		0.83	□□□□□ -2.28
PBP4	YDL053C	MOT1	P32333	1867 aa		0.83	□□□□□ -2.28
PBP4	YDL053C	STT4	P37297	1900 aa		0.83	□□□□□ -2.28
PBP4	YDL053C	XRN1	P22147	1528 aa	Known RBP	0.83	□□□□□ -2.28
PBP4	YDL053C	BPH1	P25356	2167 aa		0.83	□□□□□ -2.28
PBP4	YDL053C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	0.83	□□□□□ -2.28
PBP4	YDL053C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	0.83	□□□□□ -2.28
PBP4	YDL053C	URA2	P07259	2214 aa	Known RBP	0.83	□□□□□ -2.28
PBP4	YDL053C	DOP1	Q03921	1698 aa		0.82	□□□□□ -2.28
PBP4	YDL053C	BLM10	P43583	2143 aa		0.82	□□□□□ -2.28
PBP4	YDL053C	COX7	P10174	60 aa		0.82	□□□□□ -2.28
PBP4	YDL053C	PAU7	P39545	55 aa		0.82	□□□□□ -2.28
PBP4	YDL053C	YNL198C	P40166	100 aa		0.82	□□□□□ -2.28
PBP4	YDL053C	RPC10	P40422	70 aa		0.82	□□□□□ -2.28
PBP4	YDL053C	SGF11	Q03067	99 aa		0.82	□□□□□ -2.28
PBP4	YDL053C	TCB3	Q03640	1545 aa	Known RBP	0.82	□□□□□ -2.28
PBP4	YDL053C	UTP10	P42945	1769 aa	Known RBP	0.81	□□□□□ -2.28
PBP4	YDL053C	YDL022C-A	P0C5L6	82 aa		0.81	□□□□□ -2.28
PBP4	YDL053C	AUA1	P32450	94 aa		0.81	□□□□□ -2.28
PBP4	YDL053C	RPL38	P49167	78 aa	Known RBP	0.81	□□□□□ -2.28
PBP4	YDL053C	VMA9	Q3E7B6	73 aa		0.81	□□□□□ -2.28
PBP4	YDL053C	YOL097W-A	Q3E7Y9	61 aa		0.81	□□□□□ -2.28
PBP4	YDL053C	RPO31	P04051	1460 aa		0.8	□□□□□ -2.28
PBP4	YDL053C	SCC2	Q04002	1493 aa		0.8	□□□□□ -2.28
PBP4	YDL053C	YJR107C-A	P0CT86	78 aa		0.8	□□□□□ -2.28
PBP4	YDL053C	RPL43A	P0CX25	92 aa	Known RBP	0.8	□□□□□ -2.28
PBP4	YDL053C	RPL43B	P0CX26	92 aa		0.8	□□□□□ -2.28
PBP4	YDL053C	SPI1	P40092	148 aa		0.8	□□□□□ -2.28
PBP4	YDL053C	ERI1	P62651	68 aa	Known RBP	0.8	□□□□□ -2.28
PBP4	YDL053C	SDH6	Q3E785	79 aa		0.8	□□□□□ -2.28
PBP4	YDL053C	YKL018C-A	Q3E7A7	99 aa		0.8	□□□□□ -2.28
PBP4	YDL053C	YSY6	P38374	65 aa		0.79	□□□□□ -2.28
PBP4	YDL053C	ATP17	Q06405	101 aa		0.79	□□□□□ -2.28
PBP4	YDL053C	YIL102C-A	Q2V2P5	75 aa		0.79	□□□□□ -2.28
PBP4	YDL053C	YPR108W-A	Q3E7B3	70 aa		0.79	□□□□□ -2.28
PBP4	YDL053C	YOR032W-A	Q8TGS1	66 aa		0.79	□□□□□ -2.28
PBP4	YDL053C	SMC4	Q12267	1418 aa		0.79	□□□□□ -2.28
PBP4	YDL053C	TY2B-C	P25384	1770 aa		0.78	□□□□□ -2.28
PBP4	YDL053C	TY2B-DR1	Q12472	1770 aa		0.78	□□□□□ -2.28
PBP4	YDL053C	YLR157W-E	P0CF00	54 aa		0.78	□□□□□ -2.28
PBP4	YDL053C	YLR307C-A	Q3E825	87 aa		0.78	□□□□□ -2.28
PBP4	YDL053C	VPS15	P22219	1454 aa		0.78	□□□□□ -2.28
PBP4	YDL053C	MYO4	P32492	1471 aa		0.78	□□□□□ -2.28
PBP4	YDL053C	DNF3	Q12674	1656 aa		0.78	□□□□□ -2.29
PBP4	YDL053C	TY1B-BL	Q12490	1755 aa		0.78	□□□□□ -2.29
PBP4	YDL053C	YBR032W	P38223	100 aa		0.77	□□□□□ -2.29
PBP4	YDL053C	YNL190W	P53872	204 aa		0.77	□□□□□ -2.29
PBP4	YDL053C	YLR146W-A	Q2V2P1	62 aa		0.77	□□□□□ -2.29
PBP4	YDL053C	YOL164W-A	Q3E7A5	60 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms