RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR35, Length 204 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR35	snR35	YBR072C-A	Q3E794	53 aa		0.88	□□□□□ -2.27
snR35	snR35	MIC10	Q96VH5	97 aa		0.88	□□□□□ -2.27
snR35	snR35	RGI1	P40043	161 aa	Predicted RBP	0.87	□□□□□ -2.27
snR35	snR35	YMR090W	Q04304	227 aa	Known RBP	0.87	□□□□□ -2.27
snR35	snR35	YDR010C	Q12426	110 aa		0.87	□□□□□ -2.27
snR35	snR35	SEC7	P11075	2009 aa	Known RBP	0.87	□□□□□ -2.27
snR35	snR35	CCW14	O13547	238 aa		0.86	□□□□□ -2.27
snR35	snR35	YCR101C	P25607	182 aa		0.86	□□□□□ -2.27
snR35	snR35	YIL086C	P40503	102 aa		0.86	□□□□□ -2.27
snR35	snR35	YPL038W-A	Q3E7B4	63 aa		0.86	□□□□□ -2.27
snR35	snR35	SHU1	P38751	150 aa		0.85	□□□□□ -2.27
snR35	snR35	GCV3	P39726	170 aa	Predicted RBP	0.85	□□□□□ -2.27
snR35	snR35	TSC11	P40061	1430 aa		0.85	□□□□□ -2.27
snR35	snR35	UBC4	P15731	148 aa		0.84	□□□□□ -2.27
snR35	snR35	KRE5	P22023	1365 aa		0.83	□□□□□ -2.28
snR35	snR35	TOP2	P06786	1428 aa	Known RBP	0.83	□□□□□ -2.28
snR35	snR35	TY4B-H	P0C2J7	1802 aa		0.83	□□□□□ -2.28
snR35	snR35	YLR255C	O13574	117 aa		0.83	□□□□□ -2.28
snR35	snR35	YBR090C	P38253	122 aa		0.83	□□□□□ -2.28
snR35	snR35	COX12	Q01519	83 aa		0.83	□□□□□ -2.28
snR35	snR35	YCR095W-A	Q3E787	52 aa		0.83	□□□□□ -2.28
snR35	snR35	SNA2	P56508	79 aa		0.82	□□□□□ -2.28
snR35	snR35	UBC5	P15732	148 aa		0.81	□□□□□ -2.28
snR35	snR35	MPC2	P38857	129 aa		0.81	□□□□□ -2.28
snR35	snR35	BLM10	P43583	2143 aa		0.81	□□□□□ -2.28
snR35	snR35	COX19	Q3E731	98 aa		0.81	□□□□□ -2.28
snR35	snR35	YOL164W-A	Q3E7A5	60 aa		0.81	□□□□□ -2.28
snR35	snR35	BRR2	P32639	2163 aa	Known RBP	0.8	□□□□□ -2.28
snR35	snR35	BNI1	P41832	1953 aa		0.8	□□□□□ -2.28
snR35	snR35	YDR210W	Q03482	75 aa		0.8	□□□□□ -2.28
snR35	snR35	FYV7	Q12247	151 aa		0.8	□□□□□ -2.28
snR35	snR35	SNF2	P22082	1703 aa		0.79	□□□□□ -2.28
snR35	snR35	RPS29B	P41058	56 aa	Known RBP	0.79	□□□□□ -2.28
snR35	snR35	MRX7	P53869	86 aa		0.79	□□□□□ -2.28
snR35	snR35	MIX14	Q04341	121 aa		0.79	□□□□□ -2.28
snR35	snR35	PDR11	P40550	1411 aa		0.79	□□□□□ -2.28
snR35	snR35	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.79	□□□□□ -2.28
snR35	snR35	PAU5	P43575	122 aa		0.78	□□□□□ -2.28
snR35	snR35	SRB8	P25648	1427 aa		0.78	□□□□□ -2.28
snR35	snR35	GEA1	P47102	1408 aa	Predicted RBP	0.78	□□□□□ -2.28
snR35	snR35	MRP17	P28778	131 aa		0.77	□□□□□ -2.29
snR35	snR35	RSM19	P53733	91 aa	Predicted RBP	0.77	□□□□□ -2.29
snR35	snR35	PAU6	P0CE90	120 aa		0.75	□□□□□ -2.29
snR35	snR35	PAU18	P0CE91	120 aa		0.75	□□□□□ -2.29
snR35	snR35	ROX3	P25046	220 aa		0.75	□□□□□ -2.29
snR35	snR35	ICY1	Q04329	127 aa		0.75	□□□□□ -2.29
snR35	snR35	PAU20	Q08322	120 aa		0.75	□□□□□ -2.29
snR35	snR35	GEA2	P39993	1459 aa	Known RBP	0.74	□□□□□ -2.29
snR35	snR35	RPA12	P32529	125 aa	Known RBP	0.74	□□□□□ -2.29
snR35	snR35	KSH1	Q8TGJ3	72 aa		0.74	□□□□□ -2.29
snR35	snR35	SSN2	P38931	1420 aa		0.73	□□□□□ -2.29
snR35	snR35	RPS11A	P0CX47	156 aa	Known RBP	0.73	□□□□□ -2.29
snR35	snR35	RPS11B	P0CX48	156 aa	Known RBP	0.73	□□□□□ -2.29
snR35	snR35	YBL071C	P38185	102 aa		0.73	□□□□□ -2.29
snR35	snR35	YHL005C	P38752	130 aa		0.73	□□□□□ -2.29
snR35	snR35	EMC5	P40540	141 aa		0.73	□□□□□ -2.29
snR35	snR35	YOR289W	Q12012	251 aa	Predicted RBP	0.73	□□□□□ -2.29
snR35	snR35	REV3	P14284	1504 aa		0.73	□□□□□ -2.29
snR35	snR35	POL2	P21951	2222 aa	Known RBP	0.72	□□□□□ -2.29
snR35	snR35	MRPL38	P35996	138 aa	Predicted RBP	0.72	□□□□□ -2.29
snR35	snR35	YBR292C	P38357	123 aa		0.72	□□□□□ -2.29
snR35	snR35	YNR034W-A	Q3E841	98 aa		0.72	□□□□□ -2.29
snR35	snR35	FAS2	P19097	1887 aa	Known RBP	0.71	□□□□□ -2.3
snR35	snR35	BPT1	P14772	1559 aa		0.71	□□□□□ -2.3
snR35	snR35	PAU1	P0CE88	120 aa		0.71	□□□□□ -2.3
snR35	snR35	PAU14	P0CE89	120 aa		0.71	□□□□□ -2.3
snR35	snR35	PAU8	P0CE92	120 aa		0.71	□□□□□ -2.3
snR35	snR35	PAU11	P0CE93	120 aa		0.71	□□□□□ -2.3
snR35	snR35	PAU13	P38725	120 aa		0.71	□□□□□ -2.3
snR35	snR35	AIM19	P40502	157 aa		0.71	□□□□□ -2.3
snR35	snR35	PAU10	Q03050	120 aa		0.71	□□□□□ -2.3
snR35	snR35	PAU9	Q3E770	120 aa		0.71	□□□□□ -2.3
snR35	snR35	MYO1	P08964	1928 aa		0.71	□□□□□ -2.3
snR35	snR35	CAT8	P39113	1433 aa		0.71	□□□□□ -2.3
snR35	snR35	HMRA1	P0CY11	126 aa		0.7	□□□□□ -2.3
snR35	snR35	ZEO1	Q08245	113 aa		0.7	□□□□□ -2.3
snR35	snR35	BUD4	P47136	1447 aa		0.7	□□□□□ -2.3
snR35	snR35	NTE1	Q04958	1679 aa		0.69	□□□□□ -2.3
snR35	snR35	RSF2	P46974	1380 aa		0.68	□□□□□ -2.3
snR35	snR35	RSM18	P40033	138 aa		0.67	□□□□□ -2.3
snR35	snR35	SPC1	P46965	94 aa		0.67	□□□□□ -2.3
snR35	snR35	PAU4	P53427	120 aa		0.67	□□□□□ -2.3
snR35	snR35	NHP10	Q03435	203 aa		0.67	□□□□□ -2.3
snR35	snR35	YPL225W	Q08971	146 aa	Known RBP	0.67	□□□□□ -2.3
snR35	snR35	MSL1	P40567	111 aa	Predicted RBP	0.66	□□□□□ -2.3
snR35	snR35	YNL190W	P53872	204 aa		0.66	□□□□□ -2.3
snR35	snR35	YRF1-1	P0CX20	1796 aa		0.65	□□□□□ -2.3
snR35	snR35	YRF1-5	P0CX21	1796 aa		0.65	□□□□□ -2.3
snR35	snR35	YRF1-8	P0CX22	1796 aa		0.65	□□□□□ -2.3
snR35	snR35	RIM15	P43565	1770 aa		0.65	□□□□□ -2.3
snR35	snR35	SNU13	P39990	126 aa	Known RBP	0.65	□□□□□ -2.31
snR35	snR35	RRT15	Q3E811	62 aa		0.65	□□□□□ -2.31
snR35	snR35	YNL198C	P40166	100 aa		0.64	□□□□□ -2.31
snR35	snR35	RPC10	P40422	70 aa		0.63	□□□□□ -2.31
snR35	snR35	SUS1	Q6WNK7	96 aa		0.63	□□□□□ -2.31
snR35	snR35	YRF1-2	P40105	1681 aa		0.62	□□□□□ -2.31
snR35	snR35	ATX1	P38636	73 aa		0.61	□□□□□ -2.31
snR35	snR35	MHF2	Q3E829	80 aa		0.6	□□□□□ -2.31
snR35	snR35	TY1B-BL	Q12490	1755 aa		0.6	□□□□□ -2.31
snR35	snR35	RPL38	P49167	78 aa	Known RBP	0.59	□□□□□ -2.31

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