RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W FAS2P19097 1887 aaKnown RBP0.03□□□□□ -2.4
YOP1YPR028W SRB6P32570 121 aa0.03□□□□□ -2.4
YOP1YPR028W ATX1P38636 73 aa0.03□□□□□ -2.4
YOP1YPR028W YDR210WQ03482 75 aa0.03□□□□□ -2.4
YOP1YPR028W SWC7Q06707 132 aa0.03□□□□□ -2.4
YOP1YPR028W URB1P34241 1764 aaKnown RBP0.03□□□□□ -2.4
YOP1YPR028W YRF1-6P53819 1859 aa0.02□□□□□ -2.41
YOP1YPR028W RPS11AP0CX47 156 aaKnown RBP0.02□□□□□ -2.41
YOP1YPR028W RPS11BP0CX48 156 aaKnown RBP0.02□□□□□ -2.41
YOP1YPR028W YCR101CP25607 182 aa0.02□□□□□ -2.41
YOP1YPR028W PAU16P35994 123 aa0.02□□□□□ -2.41
YOP1YPR028W COX12Q01519 83 aa0.02□□□□□ -2.41
YOP1YPR028W YIR021W-AQ3E739 70 aa0.02□□□□□ -2.41
YOP1YPR028W RPO41P13433 1351 aaKnown RBP0.02□□□□□ -2.41
YOP1YPR028W YLR419WQ06698 1435 aaKnown RBP0.02□□□□□ -2.41
YOP1YPR028W MYO1P08964 1928 aa0.01□□□□□ -2.41
YOP1YPR028W BUD23P25627 275 aaPredicted RBP0.01□□□□□ -2.41
YOP1YPR028W SEC7P11075 2009 aaKnown RBP0.01□□□□□ -2.41
YOP1YPR028W BRR2P32639 2163 aaKnown RBP0.01□□□□□ -2.41
YOP1YPR028W YNL198CP40166 100 aa-0.01□□□□□ -2.41
YOP1YPR028W MRX7P53869 86 aa-0.01□□□□□ -2.41
YOP1YPR028W YBR292CP38357 123 aa-0.02□□□□□ -2.41
YOP1YPR028W ICY1Q04329 127 aa-0.02□□□□□ -2.41
YOP1YPR028W YCR095W-AQ3E787 52 aa-0.02□□□□□ -2.41
YOP1YPR028W SRB8P25648 1427 aa-0.03□□□□□ -2.41
YOP1YPR028W SPP41P38904 1435 aa-0.03□□□□□ -2.41
YOP1YPR028W MRP17P28778 131 aa-0.03□□□□□ -2.41
YOP1YPR028W MRPL38P35996 138 aaPredicted RBP-0.03□□□□□ -2.41
YOP1YPR028W SNA2P56508 79 aa-0.03□□□□□ -2.41
YOP1YPR028W YOS1Q3E834 85 aa-0.03□□□□□ -2.41
YOP1YPR028W SSN2P38931 1420 aa-0.04□□□□□ -2.42
YOP1YPR028W YOR304C-AO14468 76 aa-0.04□□□□□ -2.42
YOP1YPR028W YER039C-AP0CD97 72 aa-0.04□□□□□ -2.42
YOP1YPR028W MIC10Q96VH5 97 aa-0.04□□□□□ -2.42
YOP1YPR028W LYS2P07702 1392 aa-0.05□□□□□ -2.42
YOP1YPR028W RPC10P40422 70 aa-0.05□□□□□ -2.42
YOP1YPR028W GNA1P43577 159 aaPredicted RBP-0.05□□□□□ -2.42
YOP1YPR028W PAU20Q08322 120 aa-0.05□□□□□ -2.42
YOP1YPR028W YFR009W-AP0C5M9 85 aa-0.06□□□□□ -2.42
YOP1YPR028W YBR016WP38216 128 aa-0.06□□□□□ -2.42
YOP1YPR028W RSM18P40033 138 aa-0.06□□□□□ -2.42
YOP1YPR028W TAO3P40468 2376 aa-0.06□□□□□ -2.42
YOP1YPR028W KRE5P22023 1365 aa-0.06□□□□□ -2.42
YOP1YPR028W PAU6P0CE90 120 aa-0.07□□□□□ -2.42
YOP1YPR028W PAU18P0CE91 120 aa-0.07□□□□□ -2.42
YOP1YPR028W YMR090WQ04304 227 aaKnown RBP-0.07□□□□□ -2.42
YOP1YPR028W YMR103CQ04436 120 aa-0.07□□□□□ -2.42
YOP1YPR028W YNR034W-AQ3E841 98 aa-0.07□□□□□ -2.42
YOP1YPR028W RIM15P43565 1770 aa-0.07□□□□□ -2.42
YOP1YPR028W AIM19P40502 157 aa-0.08□□□□□ -2.42
YOP1YPR028W PAU5P43575 122 aa-0.08□□□□□ -2.42
YOP1YPR028W SGF11Q03067 99 aa-0.08□□□□□ -2.42
YOP1YPR028W POL2P21951 2222 aaKnown RBP-0.08□□□□□ -2.42
YOP1YPR028W UBC4P15731 148 aa-0.09□□□□□ -2.42
YOP1YPR028W ROX3P25046 220 aa-0.09□□□□□ -2.42
YOP1YPR028W YBL071CP38185 102 aa-0.09□□□□□ -2.42
YOP1YPR028W MDN1Q12019 4910 aaKnown RBP-0.09□□□□□ -2.42
YOP1YPR028W PAU1P0CE88 120 aa-0.1□□□□□ -2.43
YOP1YPR028W PAU14P0CE89 120 aa-0.1□□□□□ -2.43
YOP1YPR028W PAU8P0CE92 120 aa-0.1□□□□□ -2.43
YOP1YPR028W PAU11P0CE93 120 aa-0.1□□□□□ -2.43
YOP1YPR028W YJR107C-AP0CT86 78 aa-0.1□□□□□ -2.43
YOP1YPR028W UBC5P15732 148 aa-0.1□□□□□ -2.43
YOP1YPR028W PAU13P38725 120 aa-0.1□□□□□ -2.43
YOP1YPR028W RPL38P49167 78 aaKnown RBP-0.1□□□□□ -2.43
YOP1YPR028W PAU10Q03050 120 aa-0.1□□□□□ -2.43
YOP1YPR028W PAU9Q3E770 120 aa-0.1□□□□□ -2.43
YOP1YPR028W CAT8P39113 1433 aa-0.11□□□□□ -2.43
YOP1YPR028W LHP1P33399 275 aaKnown RBP-0.11□□□□□ -2.43
YOP1YPR028W MIX14Q04341 121 aa-0.11□□□□□ -2.43
YOP1YPR028W YIL134C-AQ45U18 67 aa-0.11□□□□□ -2.43
YOP1YPR028W BPT1P14772 1559 aa-0.11□□□□□ -2.43
YOP1YPR028W PDX3P38075 228 aaKnown RBP-0.12□□□□□ -2.43
YOP1YPR028W YHL005CP38752 130 aa-0.12□□□□□ -2.43
YOP1YPR028W RPS12P48589 143 aaKnown RBP-0.12□□□□□ -2.43
YOP1YPR028W PAU4P53427 120 aa-0.12□□□□□ -2.43
YOP1YPR028W RSM19P53733 91 aaPredicted RBP-0.12□□□□□ -2.43
YOP1YPR028W TY3B-IQ7LHG5 1498 aaKnown RBP-0.12□□□□□ -2.43
YOP1YPR028W YRF1-2P40105 1681 aa-0.12□□□□□ -2.43
YOP1YPR028W NTE1Q04958 1679 aa-0.13□□□□□ -2.43
YOP1YPR028W YBR090CP38253 122 aa-0.13□□□□□ -2.43
YOP1YPR028W EMC5P40540 141 aa-0.13□□□□□ -2.43
YOP1YPR028W BUD4P47136 1447 aa-0.13□□□□□ -2.43
YOP1YPR028W TY1B-BLQ12490 1755 aa-0.14□□□□□ -2.43
YOP1YPR028W TSC11P40061 1430 aa-0.14□□□□□ -2.43
YOP1YPR028W RSF2P46974 1380 aa-0.15□□□□□ -2.43
YOP1YPR028W COX7P10174 60 aa-0.15□□□□□ -2.43
YOP1YPR028W SPC1P46965 94 aa-0.15□□□□□ -2.43
YOP1YPR028W NHP10Q03435 203 aa-0.15□□□□□ -2.43
YOP1YPR028W YNL042W-BQ3E7Z2 85 aa-0.15□□□□□ -2.43
YOP1YPR028W GEA1P47102 1408 aaPredicted RBP-0.15□□□□□ -2.43
YOP1YPR028W RGI1P40043 161 aaPredicted RBP-0.16□□□□□ -2.44
YOP1YPR028W YER137CP40083 148 aaKnown RBP-0.16□□□□□ -2.44
YOP1YPR028W YOR289WQ12012 251 aaPredicted RBP-0.16□□□□□ -2.44
YOP1YPR028W KSH1Q8TGJ3 72 aa-0.16□□□□□ -2.44
YOP1YPR028W Q0032Q9ZZX7 96 aa-0.16□□□□□ -2.44
YOP1YPR028W HMRA1P0CY11 126 aa-0.17□□□□□ -2.44
YOP1YPR028W PDR11P40550 1411 aa-0.19□□□□□ -2.44
YOP1YPR028W SNU13P39990 126 aaKnown RBP-0.19□□□□□ -2.44
YOP1YPR028W YRF1-1P0CX20 1796 aa-0.19□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms