RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	YNR077C	P53758	84 aa		3.12	□□□□□ -1.91
YTM1	YOR272W	LSM6	Q06406	86 aa	Known RBP	3.12	□□□□□ -1.91
YTM1	YOR272W	YOR029W	Q12243	111 aa		3.12	□□□□□ -1.91
YTM1	YOR272W	YKL183C-A	Q3E765	70 aa		3.12	□□□□□ -1.91
YTM1	YOR272W	KTI11	Q3E840	82 aa		3.12	□□□□□ -1.91
YTM1	YOR272W	HTL1	Q9URQ5	78 aa		3.12	□□□□□ -1.91
YTM1	YOR272W	HFA1	P32874	2273 aa		3.11	□□□□□ -1.91
YTM1	YOR272W	YHR139C-A	O13536	103 aa		3.11	□□□□□ -1.91
YTM1	YOR272W	MRPL31	P14063	131 aa	Predicted RBP	3.11	□□□□□ -1.91
YTM1	YOR272W	TOM6	P33448	61 aa		3.11	□□□□□ -1.91
YTM1	YOR272W	SMP1	P38128	452 aa		3.11	□□□□□ -1.91
YTM1	YOR272W	YHL042W	P38729	150 aa		3.11	□□□□□ -1.91
YTM1	YOR272W	PET8	P38921	284 aa		3.11	□□□□□ -1.91
YTM1	YOR272W	HUA1	P40325	198 aa		3.11	□□□□□ -1.91
YTM1	YOR272W	FIP1	P45976	327 aa		3.11	□□□□□ -1.91
YTM1	YOR272W	API2	Q04413	109 aa		3.11	□□□□□ -1.91
YTM1	YOR272W	YMR103C	Q04436	120 aa		3.11	□□□□□ -1.91
YTM1	YOR272W	YOL118C	Q08259	102 aa		3.11	□□□□□ -1.91
YTM1	YOR272W	DAD1	Q12248	94 aa		3.11	□□□□□ -1.91
YTM1	YOR272W	ROX3	P25046	220 aa		3.1	□□□□□ -1.91
YTM1	YOR272W	YOR343C	Q12484	108 aa		3.1	□□□□□ -1.91
YTM1	YOR272W	YLR412C-A	Q3E742	68 aa		3.1	□□□□□ -1.91
YTM1	YOR272W	BOL1	Q3E793	110 aa		3.1	□□□□□ -1.91
YTM1	YOR272W	YPL038W-A	Q3E7B4	63 aa		3.1	□□□□□ -1.91
YTM1	YOR272W	TOM40	P23644	387 aa	Known RBP	3.09	□□□□□ -1.92
YTM1	YOR272W	DSE2	P38844	325 aa		3.09	□□□□□ -1.92
YTM1	YOR272W	PAU7	P39545	55 aa		3.09	□□□□□ -1.92
YTM1	YOR272W	PEX22	P39718	180 aa		3.09	□□□□□ -1.92
YTM1	YOR272W	GPI19	Q04082	140 aa		3.09	□□□□□ -1.92
YTM1	YOR272W	FIT2	Q08906	153 aa		3.09	□□□□□ -1.92
YTM1	YOR272W	YOR192C-C	Q3E736	78 aa		3.09	□□□□□ -1.92
YTM1	YOR272W	KSH1	Q8TGJ3	72 aa		3.09	□□□□□ -1.92
YTM1	YOR272W	IRA1	P18963	3092 aa		3.08	□□□□□ -1.92
YTM1	YOR272W	YDL022C-A	P0C5L6	82 aa		3.08	□□□□□ -1.92
YTM1	YOR272W	YHL018W	P38744	120 aa	Predicted RBP	3.08	□□□□□ -1.92
YTM1	YOR272W	VTC1	P40046	129 aa	RIP-Chip data	3.08	□□□□□ -1.92	not detected
YTM1	YOR272W	GLE2	P40066	365 aa		3.08	□□□□□ -1.92
YTM1	YOR272W	YFR054C	P43622	192 aa		3.08	□□□□□ -1.92
YTM1	YOR272W	YGR164W	P53291	111 aa		3.08	□□□□□ -1.92
YTM1	YOR272W	YGR219W	P53307	113 aa		3.08	□□□□□ -1.92
YTM1	YOR272W	TOM7	P53507	60 aa		3.08	□□□□□ -1.92
YTM1	YOR272W	YHP1	Q04116	353 aa		3.08	□□□□□ -1.92
YTM1	YOR272W	MIX14	Q04341	121 aa		3.08	□□□□□ -1.92
YTM1	YOR272W	YMR175W-A	Q3E766	64 aa		3.08	□□□□□ -1.92
YTM1	YOR272W	RPS16A	P0CX51	143 aa	Known RBP	3.07	□□□□□ -1.92
YTM1	YOR272W	RPS16B	P0CX52	143 aa	Known RBP	3.07	□□□□□ -1.92
YTM1	YOR272W	YMR31	P19955	123 aa		3.07	□□□□□ -1.92
YTM1	YOR272W	HSP12	P22943	109 aa	Known RBP	3.07	□□□□□ -1.92
YTM1	YOR272W	YKR032W	P36127	104 aa		3.07	□□□□□ -1.92
YTM1	YOR272W	YIA6	P40556	373 aa		3.07	□□□□□ -1.92
YTM1	YOR272W	YFL051C	P43552	160 aa		3.07	□□□□□ -1.92
YTM1	YOR272W	SFT1	P43682	97 aa		3.07	□□□□□ -1.92
YTM1	YOR272W	PGU1	P47180	361 aa		3.07	□□□□□ -1.92
YTM1	YOR272W	SDC1	Q03323	175 aa		3.07	□□□□□ -1.92
YTM1	YOR272W	SHH4	Q06236	168 aa		3.07	□□□□□ -1.92
YTM1	YOR272W	IRC23	Q08416	157 aa		3.07	□□□□□ -1.92
YTM1	YOR272W	YDR381C-A	Q3E6R5	114 aa		3.07	□□□□□ -1.92
YTM1	YOR272W	YNL217W	P40152	326 aa		3.06	□□□□□ -1.92
YTM1	YOR272W	NCE101	Q02820	53 aa		3.06	□□□□□ -1.92
YTM1	YOR272W	YPL261C	Q08976	102 aa		3.06	□□□□□ -1.92
YTM1	YOR272W	TIM22	Q12328	207 aa		3.06	□□□□□ -1.92
YTM1	YOR272W	CSF1	Q12150	2958 aa		3.06	□□□□□ -1.92
YTM1	YOR272W	RPL30	P14120	105 aa	Known RBP	3.05	□□□□□ -1.92
YTM1	YOR272W	RRT13	P40042	185 aa		3.05	□□□□□ -1.92
YTM1	YOR272W	YGR018C	P53211	109 aa		3.05	□□□□□ -1.92
YTM1	YOR272W	YDR115W	Q04598	105 aa		3.05	□□□□□ -1.92
YTM1	YOR272W	IGO2	Q9P305	131 aa		3.05	□□□□□ -1.92
YTM1	YOR272W	CYR1	P08678	2026 aa	Known RBP	3.05	□□□□□ -1.92
YTM1	YOR272W	PRP8	P33334	2413 aa	Known RBP	3.04	□□□□□ -1.92
YTM1	YOR272W	FPR2	P32472	135 aa		3.04	□□□□□ -1.92
YTM1	YOR272W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	not detected
YTM1	YOR272W	YAR029W	P39549	74 aa		3.04	□□□□□ -1.92
YTM1	YOR272W	YIL086C	P40503	102 aa		3.04	□□□□□ -1.92
YTM1	YOR272W	MGR2	Q02889	113 aa		3.04	□□□□□ -1.92
YTM1	YOR272W	COA3	Q3E7B2	85 aa		3.04	□□□□□ -1.92
YTM1	YOR272W	YNL277W-A	Q3E7Z0	62 aa		3.04	□□□□□ -1.92
YTM1	YOR272W	YHR214C-E	Q8TGK0	99 aa		3.04	□□□□□ -1.92
YTM1	YOR272W	PFY1	P07274	126 aa		3.03	□□□□□ -1.92
YTM1	YOR272W	PBI2	P0CT04	75 aa	Known RBP	3.03	□□□□□ -1.92
YTM1	YOR272W	RPL18A	P0CX49	186 aa	Known RBP	3.03	□□□□□ -1.92
YTM1	YOR272W	RPL18B	P0CX50	186 aa	Known RBP	3.03	□□□□□ -1.92
YTM1	YOR272W	BET1	P22804	142 aa		3.03	□□□□□ -1.92
YTM1	YOR272W	MXR2	P25566	168 aa		3.03	□□□□□ -1.92
YTM1	YOR272W	UBC13	P52490	153 aa		3.03	□□□□□ -1.92
YTM1	YOR272W	YDR102C	Q03864	110 aa		3.03	□□□□□ -1.92
YTM1	YOR272W	YGL258W-A	Q3E740	77 aa		3.03	□□□□□ -1.92
YTM1	YOR272W	UBC4	P15731	148 aa		3.02	□□□□□ -1.93
YTM1	YOR272W	RPL16B	P26785	198 aa	Known RBP	3.02	□□□□□ -1.93
YTM1	YOR272W	YSY6	P38374	65 aa		3.02	□□□□□ -1.93
YTM1	YOR272W	YER187W	P40102	141 aa		3.02	□□□□□ -1.93
YTM1	YOR272W	YMR141C	P40211	102 aa		3.02	□□□□□ -1.93
YTM1	YOR272W	ECO1	P43605	281 aa		3.02	□□□□□ -1.93
YTM1	YOR272W	MMS2	P53152	137 aa		3.02	□□□□□ -1.93
YTM1	YOR272W	DAD4	P69851	72 aa		3.02	□□□□□ -1.93
YTM1	YOR272W	HSK3	P69852	69 aa		3.02	□□□□□ -1.93
YTM1	YOR272W	IRC19	Q07843	230 aa		3.02	□□□□□ -1.93
YTM1	YOR272W	RRS1	Q08746	203 aa	Known RBP	3.02	□□□□□ -1.93
YTM1	YOR272W	GCN1	P33892	2672 aa	Known RBP	3.02	□□□□□ -1.93
YTM1	YOR272W	HMRA2	P0CY13	119 aa		3.01	□□□□□ -1.93
YTM1	YOR272W	YDL012C	Q12489	107 aa		3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms