RNA–Protein interactions for RNA: YOR259C

RPT4, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT4, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT4	YOR259C	GLO1	P50107	326 aa		4.21	□□□□□ -1.74
RPT4	YOR259C	SBH2	P52871	88 aa		4.21	□□□□□ -1.74
RPT4	YOR259C	AIM34	Q03673	198 aa		4.21	□□□□□ -1.74
RPT4	YOR259C	YOL160W	Q08321	113 aa		4.21	□□□□□ -1.74
RPT4	YOR259C	YHR130C	P38834	111 aa		4.2	□□□□□ -1.74
RPT4	YOR259C	YER085C	P40058	173 aa		4.2	□□□□□ -1.74
RPT4	YOR259C	YNL217W	P40152	326 aa		4.2	□□□□□ -1.74
RPT4	YOR259C	LCB3	P47013	409 aa		4.2	□□□□□ -1.74
RPT4	YOR259C	AIM11	P87275	137 aa		4.2	□□□□□ -1.74
RPT4	YOR259C	PBP4	Q07362	185 aa	Known RBP	4.2	□□□□□ -1.74
RPT4	YOR259C	YPL229W	Q99395	206 aa		4.2	□□□□□ -1.74
RPT4	YOR259C	PHO85	P17157	305 aa		4.19	□□□□□ -1.74
RPT4	YOR259C	COX10	P21592	462 aa		4.19	□□□□□ -1.74
RPT4	YOR259C	IES6	P32617	166 aa		4.19	□□□□□ -1.74
RPT4	YOR259C	MID2	P36027	376 aa		4.19	□□□□□ -1.74
RPT4	YOR259C	SPI1	P40092	148 aa		4.19	□□□□□ -1.74
RPT4	YOR259C	YLR194C	Q05777	254 aa		4.19	□□□□□ -1.74
RPT4	YOR259C	YOR008C-A	Q3E7B9	74 aa		4.19	□□□□□ -1.74
RPT4	YOR259C	RPL28	P02406	149 aa	Known RBP	4.18	□□□□□ -1.74
RPT4	YOR259C	RPS8A	P0CX39	200 aa	Known RBP	4.18	□□□□□ -1.74
RPT4	YOR259C	RPS8B	P0CX40	200 aa	Known RBP	4.18	□□□□□ -1.74
RPT4	YOR259C	DSE2	P38844	325 aa		4.18	□□□□□ -1.74
RPT4	YOR259C	YIR020C	P40575	100 aa		4.18	□□□□□ -1.74
RPT4	YOR259C	WWM1	P43582	211 aa	Known RBP	4.18	□□□□□ -1.74
RPT4	YOR259C	YGR025W	P53216	100 aa		4.18	□□□□□ -1.74
RPT4	YOR259C	ABF2	Q02486	183 aa		4.18	□□□□□ -1.74
RPT4	YOR259C	PRM7	Q12459	698 aa		4.18	□□□□□ -1.74
RPT4	YOR259C	Q0297	Q9ZZV8	51 aa		4.18	□□□□□ -1.74
RPT4	YOR259C	RPL42A	P0CX27	106 aa	Known RBP	4.17	□□□□□ -1.74
RPT4	YOR259C	RPL42B	P0CX28	106 aa	Known RBP	4.17	□□□□□ -1.74
RPT4	YOR259C	ATP15	P21306	62 aa		4.17	□□□□□ -1.74
RPT4	YOR259C	POR2	P40478	281 aa		4.17	□□□□□ -1.74
RPT4	YOR259C	MRPL49	P40858	161 aa	Predicted RBP	4.17	□□□□□ -1.74
RPT4	YOR259C	DUO1	P53168	247 aa	Known RBP	4.17	□□□□□ -1.74
RPT4	YOR259C	YGR219W	P53307	113 aa		4.17	□□□□□ -1.74
RPT4	YOR259C	SPO24	Q3E752	67 aa		4.17	□□□□□ -1.74
RPT4	YOR259C	YOL085C	Q99345	113 aa		4.17	□□□□□ -1.74
RPT4	YOR259C	TOA2	P32774	122 aa		4.16	□□□□□ -1.74
RPT4	YOR259C	FIP1	P45976	327 aa		4.16	□□□□□ -1.74
RPT4	YOR259C	YIP3	P53633	176 aa		4.16	□□□□□ -1.74
RPT4	YOR259C	YPL080C	Q02826	108 aa		4.16	□□□□□ -1.74
RPT4	YOR259C	RRG8	Q06109	277 aa		4.16	□□□□□ -1.74
RPT4	YOR259C	KRE1	P17260	313 aa		4.15	□□□□□ -1.75
RPT4	YOR259C	NRG2	P38082	220 aa		4.15	□□□□□ -1.75
RPT4	YOR259C	DCV1	P43595	202 aa		4.15	□□□□□ -1.75
RPT4	YOR259C	YNL190W	P53872	204 aa		4.15	□□□□□ -1.75
RPT4	YOR259C	YAL063C-A	Q3E791	96 aa		4.15	□□□□□ -1.75
RPT4	YOR259C	YNL162W-A	Q3E7A8	72 aa		4.15	□□□□□ -1.75
RPT4	YOR259C	NUM1	Q00402	2748 aa		4.14	□□□□□ -1.75
RPT4	YOR259C	RPL18A	P0CX49	186 aa	Known RBP	4.14	□□□□□ -1.75
RPT4	YOR259C	RPL18B	P0CX50	186 aa	Known RBP	4.14	□□□□□ -1.75
RPT4	YOR259C	UGX2	P32772	223 aa		4.14	□□□□□ -1.75
RPT4	YOR259C	VMA11	P32842	164 aa		4.14	□□□□□ -1.75
RPT4	YOR259C	YIA6	P40556	373 aa		4.14	□□□□□ -1.75
RPT4	YOR259C	KEG1	P43614	200 aa		4.14	□□□□□ -1.75
RPT4	YOR259C	YBL112C	Q3E7Y4	105 aa		4.14	□□□□□ -1.75
RPT4	YOR259C	YHR022C	P38763	256 aa		4.13	□□□□□ -1.75
RPT4	YOR259C	BNA1	P47096	177 aa		4.13	□□□□□ -1.75
RPT4	YOR259C	MRPL23	Q12487	163 aa	Predicted RBP	4.13	□□□□□ -1.75
RPT4	YOR259C	YBR200W-A	Q3E755	54 aa		4.13	□□□□□ -1.75
RPT4	YOR259C	CCW14	O13547	238 aa		4.12	□□□□□ -1.75
RPT4	YOR259C	PEX17	P40155	199 aa		4.12	□□□□□ -1.75
RPT4	YOR259C	YJR146W	P47174	117 aa		4.12	□□□□□ -1.75
RPT4	YOR259C	MRPS12	P53732	153 aa		4.12	□□□□□ -1.75
RPT4	YOR259C	YOR011W-A	Q3E807	68 aa		4.12	□□□□□ -1.75
RPT4	YOR259C	YFL041W-A	Q3E817	63 aa		4.12	□□□□□ -1.75
RPT4	YOR259C	YCR085W	P25650	117 aa		4.11	□□□□□ -1.75
RPT4	YOR259C	RPL16A	P26784	199 aa	Known RBP	4.11	□□□□□ -1.75
RPT4	YOR259C	YBR209W	P38311	105 aa		4.11	□□□□□ -1.75
RPT4	YOR259C	SKI6	P46948	246 aa	Predicted RBP	4.11	□□□□□ -1.75
RPT4	YOR259C	VPS55	P47111	140 aa		4.11	□□□□□ -1.75
RPT4	YOR259C	YGR039W	P53225	103 aa		4.11	□□□□□ -1.75
RPT4	YOR259C	YMR317W	Q04893	1140 aa		4.11	□□□□□ -1.75
RPT4	YOR259C	Q0255	P03881	472 aa		4.1	□□□□□ -1.75
RPT4	YOR259C	RPL15A	P05748	204 aa	Known RBP	4.1	□□□□□ -1.75
RPT4	YOR259C	MIC12	P38341	106 aa		4.1	□□□□□ -1.75
RPT4	YOR259C	CWP2	P43497	92 aa		4.1	□□□□□ -1.75
RPT4	YOR259C	YGL088W	P53151	121 aa		4.1	□□□□□ -1.75
RPT4	YOR259C	RPL16B	P26785	198 aa	Known RBP	4.09	□□□□□ -1.75
RPT4	YOR259C	AIM19	P40502	157 aa		4.09	□□□□□ -1.75
RPT4	YOR259C	YPR013C	Q12145	317 aa		4.09	□□□□□ -1.75
RPT4	YOR259C	YHR139C-A	O13536	103 aa		4.08	□□□□□ -1.76
RPT4	YOR259C	TRP1	P00912	224 aa		4.08	□□□□□ -1.76
RPT4	YOR259C	PBI2	P0CT04	75 aa	Known RBP	4.08	□□□□□ -1.76
RPT4	YOR259C	INO2	P26798	304 aa		4.08	□□□□□ -1.76
RPT4	YOR259C	SHU1	P38751	150 aa		4.08	□□□□□ -1.76
RPT4	YOR259C	YLR042C	Q07990	161 aa		4.08	□□□□□ -1.76
RPT4	YOR259C	CCW12	Q12127	133 aa		4.08	□□□□□ -1.76
RPT4	YOR259C	YIR021W-A	Q3E739	70 aa		4.08	□□□□□ -1.76
RPT4	YOR259C	YER135C	P40082	130 aa		4.07	□□□□□ -1.76
RPT4	YOR259C	HUR1	P45820	110 aa		4.07	□□□□□ -1.76
RPT4	YOR259C	COF1	Q03048	143 aa	Known RBP	4.07	□□□□□ -1.76
RPT4	YOR259C	PBA1	Q05778	276 aa		4.07	□□□□□ -1.76
RPT4	YOR259C	YCL021W-A	Q96VH3	125 aa		4.07	□□□□□ -1.76
RPT4	YOR259C	YCL042W	P25572	119 aa		4.06	□□□□□ -1.76
RPT4	YOR259C	RPB9	P27999	122 aa		4.06	□□□□□ -1.76
RPT4	YOR259C	YEL008W	P40001	126 aa		4.06	□□□□□ -1.76
RPT4	YOR259C	TOS8	P53147	276 aa		4.06	□□□□□ -1.76
RPT4	YOR259C	YDR119W-A	Q2V2P9	66 aa		4.06	□□□□□ -1.76
RPT4	YOR259C	YNL146C-A	Q3E7Z1	64 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 74.4 ms