RNA–Protein interactions for RNA: YOL087C

DUF1, Transcript of Ubiquitin-binding protein of unknown function, yeastyeast

Gene DUF1, Length 3,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DUF1YOL087C TY2B-LR1P0C2J3 1770 aa2.11□□□□□ -2.07
DUF1YOL087C TY2B-FP0CX63 1770 aa2.11□□□□□ -2.07
DUF1YOL087C TY2B-GR2P0CX64 1770 aa2.11□□□□□ -2.07
DUF1YOL087C TY2B-CP25384 1770 aa2.11□□□□□ -2.07
DUF1YOL087C TY2B-DR2Q03494 1770 aa2.11□□□□□ -2.07
DUF1YOL087C TY2B-DR3Q07791 1770 aaKnown RBP2.11□□□□□ -2.07
DUF1YOL087C TY2B-OR1Q12113 1770 aa2.11□□□□□ -2.07
DUF1YOL087C TY2B-DR1Q12472 1770 aa2.11□□□□□ -2.07
DUF1YOL087C TY2B-BQ12491 1770 aa2.11□□□□□ -2.07
DUF1YOL087C TY2B-OR2Q12501 1770 aa2.11□□□□□ -2.07
DUF1YOL087C RPA190P10964 1664 aaKnown RBP2.11□□□□□ -2.07
DUF1YOL087C RPL36BO14455 100 aaKnown RBP2.11□□□□□ -2.07
DUF1YOL087C RPL36AP05745 100 aaPredicted RBP2.11□□□□□ -2.07
DUF1YOL087C SEC11P15367 167 aa2.11□□□□□ -2.07
DUF1YOL087C YNL198CP40166 100 aa2.11□□□□□ -2.07
DUF1YOL087C YPR195CQ06594 109 aa2.11□□□□□ -2.07
DUF1YOL087C FPR1P20081 114 aaKnown RBP2.11□□□□□ -2.07
DUF1YOL087C ROX3P25046 220 aa2.11□□□□□ -2.07
DUF1YOL087C YBR209WP38311 105 aa2.11□□□□□ -2.07
DUF1YOL087C MIC27P50945 234 aa2.11□□□□□ -2.07
DUF1YOL087C HPA2Q06592 156 aa2.11□□□□□ -2.07
DUF1YOL087C COX8P04039 78 aa2.1□□□□□ -2.07
DUF1YOL087C RPL26AP05743 127 aaKnown RBP2.1□□□□□ -2.07
DUF1YOL087C RPL22AP05749 121 aaKnown RBP2.1□□□□□ -2.07
DUF1YOL087C PAU23Q07987 124 aa2.1□□□□□ -2.07
DUF1YOL087C PAU17Q12370 124 aa2.1□□□□□ -2.07
DUF1YOL087C MHF2Q3E829 80 aa2.1□□□□□ -2.07
DUF1YOL087C GSC2P40989 1895 aa2.1□□□□□ -2.07
DUF1YOL087C GDB1Q06625 1536 aa2.1□□□□□ -2.07
DUF1YOL087C YDR381C-AQ3E6R5 114 aa2.1□□□□□ -2.07
DUF1YOL087C MET31Q03081 177 aa2.1□□□□□ -2.07
DUF1YOL087C YDL157CQ12082 118 aa2.1□□□□□ -2.07
DUF1YOL087C FKS1P38631 1876 aaKnown RBP2.09□□□□□ -2.07
DUF1YOL087C QCR8P08525 94 aa2.09□□□□□ -2.07
DUF1YOL087C SOD1P00445 154 aaKnown RBP2.09□□□□□ -2.08
DUF1YOL087C YHL005CP38752 130 aa2.09□□□□□ -2.08
DUF1YOL087C SPC1P46965 94 aa2.09□□□□□ -2.08
DUF1YOL087C CYT2Q00873 224 aa2.09□□□□□ -2.08
DUF1YOL087C YER084WP40057 128 aa2.09□□□□□ -2.08
DUF1YOL087C CIS3P47001 227 aa2.09□□□□□ -2.08
DUF1YOL087C FIT2Q08906 153 aa2.09□□□□□ -2.08
DUF1YOL087C YMR030W-AQ3E760 96 aa2.09□□□□□ -2.08
DUF1YOL087C VMA9Q3E7B6 73 aa2.09□□□□□ -2.08
DUF1YOL087C YHR022CP38763 256 aa2.08□□□□□ -2.08
DUF1YOL087C YEL014CP39999 101 aa2.08□□□□□ -2.08
DUF1YOL087C RPL26BP53221 127 aaKnown RBP2.08□□□□□ -2.08
DUF1YOL087C YLR285C-AQ3E771 56 aa2.08□□□□□ -2.08
DUF1YOL087C HSP150P32478 413 aa2.08□□□□□ -2.08
DUF1YOL087C RPS19AP07280 144 aaKnown RBP2.07□□□□□ -2.08
DUF1YOL087C RPS19BP07281 144 aaPredicted RBP2.07□□□□□ -2.08
DUF1YOL087C TIM12P32830 109 aa2.07□□□□□ -2.08
DUF1YOL087C PDX3P38075 228 aaKnown RBP2.07□□□□□ -2.08
DUF1YOL087C MLP1Q02455 1875 aaKnown RBP2.07□□□□□ -2.08
DUF1YOL087C MRP17P28778 131 aa2.07□□□□□ -2.08
DUF1YOL087C YOR105WQ08504 108 aa2.07□□□□□ -2.08
DUF1YOL087C YMR230W-AQ3E7B5 62 aa2.07□□□□□ -2.08
DUF1YOL087C YFL041W-AQ3E817 63 aa2.07□□□□□ -2.08
DUF1YOL087C ACC1Q00955 2233 aaKnown RBP2.07□□□□□ -2.08
DUF1YOL087C YJL197C-AP0C5P0 93 aa2.07□□□□□ -2.08
DUF1YOL087C TMC1Q08422 150 aaPredicted RBP2.07□□□□□ -2.08
DUF1YOL087C BPH1P25356 2167 aa2.07□□□□□ -2.08
DUF1YOL087C YPL038W-AQ3E7B4 63 aa2.06□□□□□ -2.08
DUF1YOL087C YHR214C-DP0CX93 97 aa2.06□□□□□ -2.08
DUF1YOL087C YOL118CQ08259 102 aa2.06□□□□□ -2.08
DUF1YOL087C YCR095W-AQ3E787 52 aa2.06□□□□□ -2.08
DUF1YOL087C YJR146WP47174 117 aa2.06□□□□□ -2.08
DUF1YOL087C LSM6Q06406 86 aaKnown RBP2.06□□□□□ -2.08
DUF1YOL087C YCF1P39109 1515 aaKnown RBP2.05□□□□□ -2.08
DUF1YOL087C SSK2P53599 1579 aa2.05□□□□□ -2.08
DUF1YOL087C RIF1P29539 1916 aa2.05□□□□□ -2.08
DUF1YOL087C VPS15P22219 1454 aa2.05□□□□□ -2.08
DUF1YOL087C YLR419WQ06698 1435 aaKnown RBP2.04□□□□□ -2.08
DUF1YOL087C THO2P53552 1597 aaKnown RBP2.04□□□□□ -2.08
DUF1YOL087C DOP1Q03921 1698 aa2.04□□□□□ -2.08
DUF1YOL087C UFD4P33202 1483 aa2.04□□□□□ -2.08
DUF1YOL087C MRPL38P35996 138 aaPredicted RBP2.04□□□□□ -2.08
DUF1YOL087C POR2P40478 281 aa2.04□□□□□ -2.08
DUF1YOL087C SNA2P56508 79 aa2.04□□□□□ -2.08
DUF1YOL087C YOR343CQ12484 108 aa2.04□□□□□ -2.08
DUF1YOL087C PAU6P0CE90 120 aa2.03□□□□□ -2.08
DUF1YOL087C PAU18P0CE91 120 aa2.03□□□□□ -2.08
DUF1YOL087C YBR027CP38220 110 aa2.03□□□□□ -2.08
DUF1YOL087C YIL102C-AQ2V2P5 75 aa2.03□□□□□ -2.08
DUF1YOL087C BPT1P14772 1559 aa2.03□□□□□ -2.08
DUF1YOL087C ESP1Q03018 1630 aa2.03□□□□□ -2.08
DUF1YOL087C MRPL31P14063 131 aaPredicted RBP2.03□□□□□ -2.08
DUF1YOL087C AIM4P38305 123 aaPredicted RBP2.02□□□□□ -2.09
DUF1YOL087C SNQ2P32568 1501 aaKnown RBP2.02□□□□□ -2.09
DUF1YOL087C YGL014C-AP0C5N1 53 aa2.02□□□□□ -2.09
DUF1YOL087C KOG1P38873 1557 aa2.02□□□□□ -2.09
DUF1YOL087C FLO9P39712 1322 aa2.02□□□□□ -2.09
DUF1YOL087C YMR321CQ04898 105 aa2.02□□□□□ -2.09
DUF1YOL087C ECM29P38737 1868 aa2.01□□□□□ -2.09
DUF1YOL087C YBL071CP38185 102 aa2.01□□□□□ -2.09
DUF1YOL087C SED1Q01589 338 aa2.01□□□□□ -2.09
DUF1YOL087C FPR2P32472 135 aa2.01□□□□□ -2.09
DUF1YOL087C SPT6P23615 1451 aaKnown RBP2.01□□□□□ -2.09
DUF1YOL087C DNF1P32660 1571 aa2.01□□□□□ -2.09
DUF1YOL087C YJL144WP47009 104 aa2.01□□□□□ -2.09
DUF1YOL087C IRC21Q04772 201 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms