RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	PAU15	P40585	124 aa		0.54	□□□□□ -2.32
TIF11	YMR260C	IMP2	P46972	177 aa		0.54	□□□□□ -2.32
TIF11	YMR260C	YBR072C-A	Q3E794	53 aa		0.54	□□□□□ -2.32
TIF11	YMR260C	UBC4	P15731	148 aa		0.53	□□□□□ -2.32
TIF11	YMR260C	UBC5	P15732	148 aa		0.53	□□□□□ -2.32
TIF11	YMR260C	YDR010C	Q12426	110 aa		0.53	□□□□□ -2.32
TIF11	YMR260C	COX19	Q3E731	98 aa		0.53	□□□□□ -2.32
TIF11	YMR260C	MIC10	Q96VH5	97 aa		0.53	□□□□□ -2.32
TIF11	YMR260C	YRF1-6	P53819	1859 aa		0.52	□□□□□ -2.33
TIF11	YMR260C	SEC7	P11075	2009 aa	Known RBP	0.52	□□□□□ -2.33
TIF11	YMR260C	YIL086C	P40503	102 aa		0.52	□□□□□ -2.33
TIF11	YMR260C	COX12	Q01519	83 aa		0.52	□□□□□ -2.33
TIF11	YMR260C	GEA1	P47102	1408 aa	Predicted RBP	0.52	□□□□□ -2.33
TIF11	YMR260C	AUA1	P32450	94 aa		0.51	□□□□□ -2.33
TIF11	YMR260C	URB1	P34241	1764 aa	Known RBP	0.51	□□□□□ -2.33
TIF11	YMR260C	SHU1	P38751	150 aa		0.51	□□□□□ -2.33
TIF11	YMR260C	YHR173C	P38864	112 aa		0.51	□□□□□ -2.33
TIF11	YMR260C	MIX14	Q04341	121 aa		0.51	□□□□□ -2.33
TIF11	YMR260C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.51	□□□□□ -2.33
TIF11	YMR260C	TOP2	P06786	1428 aa	Known RBP	0.5	□□□□□ -2.33
TIF11	YMR260C	KRE5	P22023	1365 aa		0.5	□□□□□ -2.33
TIF11	YMR260C	GCV3	P39726	170 aa	Predicted RBP	0.5	□□□□□ -2.33
TIF11	YMR260C	YDR210W	Q03482	75 aa		0.5	□□□□□ -2.33
TIF11	YMR260C	YPL038W-A	Q3E7B4	63 aa		0.5	□□□□□ -2.33
TIF11	YMR260C	YLR255C	O13574	117 aa		0.49	□□□□□ -2.33
TIF11	YMR260C	MPC2	P38857	129 aa		0.49	□□□□□ -2.33
TIF11	YMR260C	FYV7	Q12247	151 aa		0.49	□□□□□ -2.33
TIF11	YMR260C	TY4B-H	P0C2J7	1802 aa		0.49	□□□□□ -2.33
TIF11	YMR260C	BRR2	P32639	2163 aa	Known RBP	0.49	□□□□□ -2.33
TIF11	YMR260C	BLM10	P43583	2143 aa		0.49	□□□□□ -2.33
TIF11	YMR260C	BPT1	P14772	1559 aa		0.49	□□□□□ -2.33
TIF11	YMR260C	BNI1	P41832	1953 aa		0.48	□□□□□ -2.33
TIF11	YMR260C	GEA2	P39993	1459 aa	Known RBP	0.48	□□□□□ -2.33
TIF11	YMR260C	PDR11	P40550	1411 aa		0.48	□□□□□ -2.33
TIF11	YMR260C	MRP17	P28778	131 aa		0.48	□□□□□ -2.33
TIF11	YMR260C	RPS29B	P41058	56 aa	Known RBP	0.48	□□□□□ -2.33
TIF11	YMR260C	SNA2	P56508	79 aa		0.48	□□□□□ -2.33
TIF11	YMR260C	YCR095W-A	Q3E787	52 aa		0.48	□□□□□ -2.33
TIF11	YMR260C	SRB8	P25648	1427 aa		0.47	□□□□□ -2.33
TIF11	YMR260C	YHL005C	P38752	130 aa		0.47	□□□□□ -2.33
TIF11	YMR260C	KSH1	Q8TGJ3	72 aa		0.47	□□□□□ -2.33
TIF11	YMR260C	POL2	P21951	2222 aa	Known RBP	0.47	□□□□□ -2.33
TIF11	YMR260C	CAT8	P39113	1433 aa		0.47	□□□□□ -2.33
TIF11	YMR260C	ROX3	P25046	220 aa		0.46	□□□□□ -2.34
TIF11	YMR260C	YBR292C	P38357	123 aa		0.46	□□□□□ -2.34
TIF11	YMR260C	PAU5	P43575	122 aa		0.46	□□□□□ -2.34
TIF11	YMR260C	RSM19	P53733	91 aa	Predicted RBP	0.46	□□□□□ -2.34
TIF11	YMR260C	MRX7	P53869	86 aa		0.46	□□□□□ -2.34
TIF11	YMR260C	REV3	P14284	1504 aa		0.46	□□□□□ -2.34
TIF11	YMR260C	BUD4	P47136	1447 aa		0.46	□□□□□ -2.34
TIF11	YMR260C	EMC5	P40540	141 aa		0.45	□□□□□ -2.34
TIF11	YMR260C	ICY1	Q04329	127 aa		0.45	□□□□□ -2.34
TIF11	YMR260C	YOL164W-A	Q3E7A5	60 aa		0.45	□□□□□ -2.34
TIF11	YMR260C	SSN2	P38931	1420 aa		0.45	□□□□□ -2.34
TIF11	YMR260C	NTE1	Q04958	1679 aa		0.44	□□□□□ -2.34
TIF11	YMR260C	MRPL38	P35996	138 aa	Predicted RBP	0.44	□□□□□ -2.34
TIF11	YMR260C	AIM19	P40502	157 aa		0.44	□□□□□ -2.34
TIF11	YMR260C	YOR289W	Q12012	251 aa	Predicted RBP	0.44	□□□□□ -2.34
TIF11	YMR260C	RPS11A	P0CX47	156 aa	Known RBP	0.43	□□□□□ -2.34
TIF11	YMR260C	RPS11B	P0CX48	156 aa	Known RBP	0.43	□□□□□ -2.34
TIF11	YMR260C	ZEO1	Q08245	113 aa		0.43	□□□□□ -2.34
TIF11	YMR260C	PAU20	Q08322	120 aa		0.43	□□□□□ -2.34
TIF11	YMR260C	SNF2	P22082	1703 aa		0.43	□□□□□ -2.34
TIF11	YMR260C	PAU6	P0CE90	120 aa		0.42	□□□□□ -2.34
TIF11	YMR260C	PAU18	P0CE91	120 aa		0.42	□□□□□ -2.34
TIF11	YMR260C	HMRA1	P0CY11	126 aa		0.42	□□□□□ -2.34
TIF11	YMR260C	YBL071C	P38185	102 aa		0.42	□□□□□ -2.34
TIF11	YMR260C	YNR034W-A	Q3E841	98 aa		0.42	□□□□□ -2.34
TIF11	YMR260C	RSF2	P46974	1380 aa		0.42	□□□□□ -2.34
TIF11	YMR260C	PAU1	P0CE88	120 aa		0.41	□□□□□ -2.34
TIF11	YMR260C	PAU14	P0CE89	120 aa		0.41	□□□□□ -2.34
TIF11	YMR260C	PAU8	P0CE92	120 aa		0.41	□□□□□ -2.34
TIF11	YMR260C	PAU11	P0CE93	120 aa		0.41	□□□□□ -2.34
TIF11	YMR260C	PAU13	P38725	120 aa		0.41	□□□□□ -2.34
TIF11	YMR260C	RSM18	P40033	138 aa		0.41	□□□□□ -2.34
TIF11	YMR260C	MSL1	P40567	111 aa	Predicted RBP	0.41	□□□□□ -2.34
TIF11	YMR260C	PAU10	Q03050	120 aa		0.41	□□□□□ -2.34
TIF11	YMR260C	YPL225W	Q08971	146 aa	Known RBP	0.41	□□□□□ -2.34
TIF11	YMR260C	PAU9	Q3E770	120 aa		0.41	□□□□□ -2.34
TIF11	YMR260C	MYO1	P08964	1928 aa		0.4	□□□□□ -2.34
TIF11	YMR260C	FAS2	P19097	1887 aa	Known RBP	0.4	□□□□□ -2.35
TIF11	YMR260C	TAO3	P40468	2376 aa		0.39	□□□□□ -2.35
TIF11	YMR260C	RPA12	P32529	125 aa	Known RBP	0.39	□□□□□ -2.35
TIF11	YMR260C	PDX3	P38075	228 aa	Known RBP	0.39	□□□□□ -2.35
TIF11	YMR260C	SNU13	P39990	126 aa	Known RBP	0.39	□□□□□ -2.35
TIF11	YMR260C	SPC1	P46965	94 aa		0.39	□□□□□ -2.35
TIF11	YMR260C	PAU4	P53427	120 aa		0.39	□□□□□ -2.35
TIF11	YMR260C	YNL190W	P53872	204 aa		0.39	□□□□□ -2.35
TIF11	YMR260C	NHP10	Q03435	203 aa		0.39	□□□□□ -2.35
TIF11	YMR260C	RRT15	Q3E811	62 aa		0.39	□□□□□ -2.35
TIF11	YMR260C	SUS1	Q6WNK7	96 aa		0.39	□□□□□ -2.35
TIF11	YMR260C	RIM15	P43565	1770 aa		0.39	□□□□□ -2.35
TIF11	YMR260C	YRF1-1	P0CX20	1796 aa		0.37	□□□□□ -2.35
TIF11	YMR260C	YRF1-5	P0CX21	1796 aa		0.37	□□□□□ -2.35
TIF11	YMR260C	YRF1-8	P0CX22	1796 aa		0.37	□□□□□ -2.35
TIF11	YMR260C	YNL198C	P40166	100 aa		0.37	□□□□□ -2.35
TIF11	YMR260C	YDR042C	Q03205	200 aa		0.37	□□□□□ -2.35
TIF11	YMR260C	YRF1-2	P40105	1681 aa		0.37	□□□□□ -2.35
TIF11	YMR260C	ATX1	P38636	73 aa		0.36	□□□□□ -2.35
TIF11	YMR260C	RPC10	P40422	70 aa		0.36	□□□□□ -2.35

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