RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W PAU16P35994 123 aa0.28□□□□□ -2.36
DDR48YMR173W ATX1P38636 73 aa0.28□□□□□ -2.36
DDR48YMR173W MPC2P38857 129 aa0.28□□□□□ -2.36
DDR48YMR173W YPL038W-AQ3E7B4 63 aa0.28□□□□□ -2.36
DDR48YMR173W TOP2P06786 1428 aaKnown RBP0.28□□□□□ -2.37
DDR48YMR173W BUD23P25627 275 aaPredicted RBP0.27□□□□□ -2.37
DDR48YMR173W RPA12P32529 125 aaKnown RBP0.27□□□□□ -2.37
DDR48YMR173W COX12Q01519 83 aa0.27□□□□□ -2.37
DDR48YMR173W COX19Q3E731 98 aa0.27□□□□□ -2.37
DDR48YMR173W BRR2P32639 2163 aaKnown RBP0.27□□□□□ -2.37
DDR48YMR173W YLR255CO13574 117 aa0.26□□□□□ -2.37
DDR48YMR173W YCR101CP25607 182 aa0.26□□□□□ -2.37
DDR48YMR173W SNA2P56508 79 aa0.26□□□□□ -2.37
DDR48YMR173W SPP41P38904 1435 aa0.25□□□□□ -2.37
DDR48YMR173W RPO41P13433 1351 aaKnown RBP0.25□□□□□ -2.37
DDR48YMR173W CCW14O13547 238 aa0.25□□□□□ -2.37
DDR48YMR173W YNL190WP53872 204 aa0.25□□□□□ -2.37
DDR48YMR173W YCR095W-AQ3E787 52 aa0.25□□□□□ -2.37
DDR48YMR173W MRP17P28778 131 aa0.24□□□□□ -2.37
DDR48YMR173W GNA1P43577 159 aaPredicted RBP0.24□□□□□ -2.37
DDR48YMR173W YOS1Q3E834 85 aa0.24□□□□□ -2.37
DDR48YMR173W RPS11AP0CX47 156 aaKnown RBP0.23□□□□□ -2.37
DDR48YMR173W RPS11BP0CX48 156 aaKnown RBP0.23□□□□□ -2.37
DDR48YMR173W MRX7P53869 86 aa0.23□□□□□ -2.37
DDR48YMR173W PAU20Q08322 120 aa0.23□□□□□ -2.37
DDR48YMR173W YLR419WQ06698 1435 aaKnown RBP0.22□□□□□ -2.37
DDR48YMR173W YER039C-AP0CD97 72 aa0.22□□□□□ -2.37
DDR48YMR173W YBR292CP38357 123 aa0.22□□□□□ -2.37
DDR48YMR173W YNL198CP40166 100 aa0.22□□□□□ -2.37
DDR48YMR173W YMR090WQ04304 227 aaKnown RBP0.22□□□□□ -2.37
DDR48YMR173W ICY1Q04329 127 aa0.22□□□□□ -2.37
DDR48YMR173W MIC10Q96VH5 97 aa0.22□□□□□ -2.37
DDR48YMR173W SRB8P25648 1427 aa0.21□□□□□ -2.38
DDR48YMR173W LHP1P33399 275 aaKnown RBP0.21□□□□□ -2.38
DDR48YMR173W YMR103CQ04436 120 aa0.21□□□□□ -2.38
DDR48YMR173W LYS2P07702 1392 aa0.2□□□□□ -2.38
DDR48YMR173W PAU1P0CE88 120 aa0.2□□□□□ -2.38
DDR48YMR173W PAU14P0CE89 120 aa0.2□□□□□ -2.38
DDR48YMR173W PAU6P0CE90 120 aa0.2□□□□□ -2.38
DDR48YMR173W PAU18P0CE91 120 aa0.2□□□□□ -2.38
DDR48YMR173W PAU8P0CE92 120 aa0.2□□□□□ -2.38
DDR48YMR173W PAU11P0CE93 120 aa0.2□□□□□ -2.38
DDR48YMR173W PAU13P38725 120 aa0.2□□□□□ -2.38
DDR48YMR173W RGI1P40043 161 aaPredicted RBP0.2□□□□□ -2.38
DDR48YMR173W RPS12P48589 143 aaKnown RBP0.2□□□□□ -2.38
DDR48YMR173W PAU10Q03050 120 aa0.2□□□□□ -2.38
DDR48YMR173W YDR210WQ03482 75 aa0.2□□□□□ -2.38
DDR48YMR173W PAU9Q3E770 120 aa0.2□□□□□ -2.38
DDR48YMR173W YJR107C-AP0CT86 78 aa0.19□□□□□ -2.38
DDR48YMR173W MRPL38P35996 138 aaPredicted RBP0.19□□□□□ -2.38
DDR48YMR173W RSM18P40033 138 aa0.19□□□□□ -2.38
DDR48YMR173W AIM19P40502 157 aa0.19□□□□□ -2.38
DDR48YMR173W EMC5P40540 141 aa0.19□□□□□ -2.38
DDR48YMR173W PAU5P43575 122 aa0.19□□□□□ -2.38
DDR48YMR173W SGF11Q03067 99 aa0.19□□□□□ -2.38
DDR48YMR173W KRE5P22023 1365 aa0.19□□□□□ -2.38
DDR48YMR173W UBC4P15731 148 aa0.18□□□□□ -2.38
DDR48YMR173W ROX3P25046 220 aa0.18□□□□□ -2.38
DDR48YMR173W RPC10P40422 70 aa0.18□□□□□ -2.38
DDR48YMR173W PAU4P53427 120 aa0.18□□□□□ -2.38
DDR48YMR173W YNR034W-AQ3E841 98 aa0.18□□□□□ -2.38
DDR48YMR173W YIL134C-AQ45U18 67 aa0.18□□□□□ -2.38
DDR48YMR173W RIM15P43565 1770 aa0.18□□□□□ -2.38
DDR48YMR173W SSN2P38931 1420 aa0.18□□□□□ -2.38
DDR48YMR173W POL2P21951 2222 aaKnown RBP0.18□□□□□ -2.38
DDR48YMR173W YFR009W-AP0C5M9 85 aa0.17□□□□□ -2.38
DDR48YMR173W YBL071CP38185 102 aa0.17□□□□□ -2.38
DDR48YMR173W YBR090CP38253 122 aa0.17□□□□□ -2.38
DDR48YMR173W YER137CP40083 148 aaKnown RBP0.17□□□□□ -2.38
DDR48YMR173W RPL38P49167 78 aaKnown RBP0.17□□□□□ -2.38
DDR48YMR173W TAO3P40468 2376 aa0.17□□□□□ -2.38
DDR48YMR173W UBC5P15732 148 aa0.16□□□□□ -2.38
DDR48YMR173W PDX3P38075 228 aaKnown RBP0.16□□□□□ -2.38
DDR48YMR173W RSM19P53733 91 aaPredicted RBP0.16□□□□□ -2.38
DDR48YMR173W MIX14Q04341 121 aa0.16□□□□□ -2.38
DDR48YMR173W HMRA1P0CY11 126 aa0.15□□□□□ -2.39
DDR48YMR173W TY1B-BLQ12490 1755 aa0.14□□□□□ -2.39
DDR48YMR173W TSC11P40061 1430 aa0.14□□□□□ -2.39
DDR48YMR173W YHL005CP38752 130 aa0.14□□□□□ -2.39
DDR48YMR173W SNU13P39990 126 aaKnown RBP0.14□□□□□ -2.39
DDR48YMR173W SPC1P46965 94 aa0.14□□□□□ -2.39
DDR48YMR173W NHP10Q03435 203 aa0.14□□□□□ -2.39
DDR48YMR173W YRF1-2P40105 1681 aa0.14□□□□□ -2.39
DDR48YMR173W YRF1-1P0CX20 1796 aa0.14□□□□□ -2.39
DDR48YMR173W YRF1-5P0CX21 1796 aa0.14□□□□□ -2.39
DDR48YMR173W YRF1-8P0CX22 1796 aa0.14□□□□□ -2.39
DDR48YMR173W YOR289WQ12012 251 aaPredicted RBP0.13□□□□□ -2.39
DDR48YMR173W GEA1P47102 1408 aaPredicted RBP0.13□□□□□ -2.39
DDR48YMR173W NTE1Q04958 1679 aa0.12□□□□□ -2.39
DDR48YMR173W TY3B-IQ7LHG5 1498 aaKnown RBP0.12□□□□□ -2.39
DDR48YMR173W COX7P10174 60 aa0.12□□□□□ -2.39
DDR48YMR173W YBR016WP38216 128 aa0.12□□□□□ -2.39
DDR48YMR173W FYV7Q12247 151 aa0.12□□□□□ -2.39
DDR48YMR173W YNL042W-BQ3E7Z2 85 aa0.12□□□□□ -2.39
DDR48YMR173W KSH1Q8TGJ3 72 aa0.12□□□□□ -2.39
DDR48YMR173W Q0032Q9ZZX7 96 aa0.12□□□□□ -2.39
DDR48YMR173W GEA2P39993 1459 aaKnown RBP0.11□□□□□ -2.39
DDR48YMR173W SUS1Q6WNK7 96 aa0.11□□□□□ -2.39
DDR48YMR173W BUD4P47136 1447 aa0.11□□□□□ -2.39
DDR48YMR173W YHR214C-DP0CX93 97 aa0.1□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms