RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C LAA1P39526 2014 aa2.05□□□□□ -2.08
VPS71YML041C SKI3P17883 1432 aaKnown RBP2.04□□□□□ -2.08
VPS71YML041C HHY1P39982 102 aa2.04□□□□□ -2.08
VPS71YML041C BNI1P41832 1953 aa2.04□□□□□ -2.08
VPS71YML041C KSH1Q8TGJ3 72 aa2.04□□□□□ -2.08
VPS71YML041C YOL118CQ08259 102 aa2.02□□□□□ -2.09
VPS71YML041C YCL001W-BQ96VH2 84 aa2.02□□□□□ -2.09
VPS71YML041C MYO1P08964 1928 aa2.01□□□□□ -2.09
VPS71YML041C SEC7P11075 2009 aaKnown RBP2□□□□□ -2.09
VPS71YML041C YMR141CP40211 102 aa1.99□□□□□ -2.09
VPS71YML041C RPL37AP49166 88 aaKnown RBP1.99□□□□□ -2.09
VPS71YML041C RSM19P53733 91 aaPredicted RBP1.99□□□□□ -2.09
VPS71YML041C YHL005CP38752 130 aa1.97□□□□□ -2.09
VPS71YML041C EMC5P40540 141 aa1.97□□□□□ -2.09
VPS71YML041C IMP2P46972 177 aa1.97□□□□□ -2.09
VPS71YML041C MSL1P40567 111 aaPredicted RBP1.96□□□□□ -2.1
VPS71YML041C YCR095W-AQ3E787 52 aa1.96□□□□□ -2.1
VPS71YML041C RSF2P46974 1380 aa1.96□□□□□ -2.1
VPS71YML041C BRR2P32639 2163 aaKnown RBP1.95□□□□□ -2.1
VPS71YML041C CCW14O13547 238 aa1.95□□□□□ -2.1
VPS71YML041C HMRA1P0CY11 126 aa1.95□□□□□ -2.1
VPS71YML041C MRPS12P53732 153 aa1.95□□□□□ -2.1
VPS71YML041C SNA2P56508 79 aa1.95□□□□□ -2.1
VPS71YML041C YJR128WP47162 119 aa1.94□□□□□ -2.1
VPS71YML041C URB1P34241 1764 aaKnown RBP1.94□□□□□ -2.1
VPS71YML041C PAU5P43575 122 aa1.93□□□□□ -2.1
VPS71YML041C LCL1Q02786 101 aa1.93□□□□□ -2.1
VPS71YML041C YPL038W-AQ3E7B4 63 aa1.93□□□□□ -2.1
VPS71YML041C SUS1Q6WNK7 96 aa1.93□□□□□ -2.1
VPS71YML041C ROX3P25046 220 aa1.92□□□□□ -2.1
VPS71YML041C COX12Q01519 83 aa1.92□□□□□ -2.1
VPS71YML041C YCR075W-AQ3E830 75 aa1.91□□□□□ -2.1
VPS71YML041C SEC16P48415 2195 aaKnown RBP1.91□□□□□ -2.1
VPS71YML041C RPA190P10964 1664 aaKnown RBP1.9□□□□□ -2.1
VPS71YML041C BPT1P14772 1559 aa1.9□□□□□ -2.1
VPS71YML041C YDR029WQ12111 104 aa1.9□□□□□ -2.11
VPS71YML041C GCV3P39726 170 aaPredicted RBP1.89□□□□□ -2.11
VPS71YML041C URA2P07259 2214 aaKnown RBP1.89□□□□□ -2.11
VPS71YML041C MRP17P28778 131 aa1.88□□□□□ -2.11
VPS71YML041C SRB8P25648 1427 aa1.88□□□□□ -2.11
VPS71YML041C RPL37BP51402 88 aaKnown RBP1.87□□□□□ -2.11
VPS71YML041C YOR034C-AQ3E735 80 aa1.87□□□□□ -2.11
VPS71YML041C RSM18P40033 138 aa1.86□□□□□ -2.11
VPS71YML041C YIL086CP40503 102 aa1.86□□□□□ -2.11
VPS71YML041C TY4B-HP0C2J7 1802 aa1.85□□□□□ -2.11
VPS71YML041C RPL43AP0CX25 92 aaKnown RBP1.85□□□□□ -2.11
VPS71YML041C RPL43BP0CX26 92 aa1.85□□□□□ -2.11
VPS71YML041C SNU13P39990 126 aaKnown RBP1.85□□□□□ -2.11
VPS71YML041C NHP10Q03435 203 aa1.85□□□□□ -2.11
VPS71YML041C YDR210WQ03482 75 aa1.85□□□□□ -2.11
VPS71YML041C COX19Q3E731 98 aa1.85□□□□□ -2.11
VPS71YML041C RRT15Q3E811 62 aa1.85□□□□□ -2.11
VPS71YML041C PAU6P0CE90 120 aa1.84□□□□□ -2.11
VPS71YML041C PAU18P0CE91 120 aa1.84□□□□□ -2.11
VPS71YML041C SHU1P38751 150 aa1.84□□□□□ -2.11
VPS71YML041C PDR10P51533 1564 aa1.84□□□□□ -2.12
VPS71YML041C NTE1Q04958 1679 aa1.83□□□□□ -2.12
VPS71YML041C ECM12O13529 151 aa1.83□□□□□ -2.12
VPS71YML041C MRX7P53869 86 aa1.83□□□□□ -2.12
VPS71YML041C YDR042CQ03205 200 aa1.83□□□□□ -2.12
VPS71YML041C YLR255CO13574 117 aa1.82□□□□□ -2.12
VPS71YML041C YBL071CP38185 102 aa1.82□□□□□ -2.12
VPS71YML041C MPC2P38857 129 aa1.82□□□□□ -2.12
VPS71YML041C AIM19P40502 157 aa1.82□□□□□ -2.12
VPS71YML041C MHF2Q3E829 80 aa1.82□□□□□ -2.12
VPS71YML041C PAU20Q08322 120 aa1.81□□□□□ -2.12
VPS71YML041C YRF1-1P0CX20 1796 aa1.8□□□□□ -2.12
VPS71YML041C YRF1-5P0CX21 1796 aa1.8□□□□□ -2.12
VPS71YML041C YRF1-8P0CX22 1796 aa1.8□□□□□ -2.12
VPS71YML041C PAU1P0CE88 120 aa1.8□□□□□ -2.12
VPS71YML041C PAU14P0CE89 120 aa1.8□□□□□ -2.12
VPS71YML041C PAU8P0CE92 120 aa1.8□□□□□ -2.12
VPS71YML041C PAU11P0CE93 120 aa1.8□□□□□ -2.12
VPS71YML041C PAU13P38725 120 aa1.8□□□□□ -2.12
VPS71YML041C PAU10Q03050 120 aa1.8□□□□□ -2.12
VPS71YML041C ICY1Q04329 127 aa1.8□□□□□ -2.12
VPS71YML041C PAU9Q3E770 120 aa1.8□□□□□ -2.12
VPS71YML041C POL2P21951 2222 aaKnown RBP1.8□□□□□ -2.12
VPS71YML041C YER188C-AP0C0V2 99 aa1.79□□□□□ -2.12
VPS71YML041C YMR082CQ04276 118 aa1.79□□□□□ -2.12
VPS71YML041C YGL194C-AQ2V2P6 80 aa1.79□□□□□ -2.12
VPS71YML041C SWR1Q05471 1514 aa1.79□□□□□ -2.12
VPS71YML041C YBR292CP38357 123 aa1.78□□□□□ -2.12
VPS71YML041C SPC1P46965 94 aa1.78□□□□□ -2.12
VPS71YML041C PAU4P53427 120 aa1.78□□□□□ -2.12
VPS71YML041C YBR072C-AQ3E794 53 aa1.78□□□□□ -2.12
VPS71YML041C YNR034W-AQ3E841 98 aa1.78□□□□□ -2.12
VPS71YML041C LTE1P07866 1435 aa1.77□□□□□ -2.13
VPS71YML041C SSN2P38931 1420 aa1.77□□□□□ -2.13
VPS71YML041C MRPL38P35996 138 aaPredicted RBP1.77□□□□□ -2.13
VPS71YML041C YHR173CP38864 112 aa1.76□□□□□ -2.13
VPS71YML041C ESC1Q03661 1658 aaKnown RBP1.75□□□□□ -2.13
VPS71YML041C YLR307C-AQ3E825 87 aa1.75□□□□□ -2.13
VPS71YML041C YLR157W-EP0CF00 54 aa1.74□□□□□ -2.13
VPS71YML041C SCP1Q08873 200 aa1.74□□□□□ -2.13
VPS71YML041C GDB1Q06625 1536 aa1.74□□□□□ -2.13
VPS71YML041C RPS11AP0CX47 156 aaKnown RBP1.72□□□□□ -2.13
VPS71YML041C RPS11BP0CX48 156 aaKnown RBP1.72□□□□□ -2.13
VPS71YML041C NHP2P32495 156 aaPredicted RBP1.71□□□□□ -2.14
VPS71YML041C YDR010CQ12426 110 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms