RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C VMR1P38735 1592 aa0.36□□□□□ -2.35
SGD1YLR336C NUP170P38181 1502 aa0.36□□□□□ -2.35
SGD1YLR336C MYO4P32492 1471 aa0.36□□□□□ -2.35
SGD1YLR336C AUA1P32450 94 aa0.36□□□□□ -2.35
SGD1YLR336C SAE3P89114 91 aa0.36□□□□□ -2.35
SGD1YLR336C DYN2Q02647 92 aa0.36□□□□□ -2.35
SGD1YLR336C RPL22AP05749 121 aaKnown RBP0.35□□□□□ -2.35
SGD1YLR336C PAU12P53343 120 aa0.35□□□□□ -2.35
SGD1YLR336C TOR2P32600 2474 aaKnown RBP0.35□□□□□ -2.35
SGD1YLR336C YJL197C-AP0C5P0 93 aa0.35□□□□□ -2.35
SGD1YLR336C SNF11P38956 169 aa0.35□□□□□ -2.35
SGD1YLR336C YFR035CP43608 114 aa0.35□□□□□ -2.35
SGD1YLR336C SPC2Q04969 178 aa0.35□□□□□ -2.35
SGD1YLR336C YGR240C-AQ3E786 66 aa0.34□□□□□ -2.35
SGD1YLR336C NUP188P52593 1655 aaKnown RBP0.34□□□□□ -2.36
SGD1YLR336C RAD50P12753 1312 aa0.34□□□□□ -2.36
SGD1YLR336C BRR2P32639 2163 aaKnown RBP0.34□□□□□ -2.36
SGD1YLR336C NKP2Q06162 153 aa0.34□□□□□ -2.36
SGD1YLR336C OCA6Q12454 224 aa0.33□□□□□ -2.36
SGD1YLR336C YLR285C-AQ3E771 56 aa0.33□□□□□ -2.36
SGD1YLR336C MRP49P32388 137 aa0.33□□□□□ -2.36
SGD1YLR336C YHR130CP38834 111 aa0.33□□□□□ -2.36
SGD1YLR336C ICS3P47034 131 aa0.33□□□□□ -2.36
SGD1YLR336C SCC2Q04002 1493 aa0.32□□□□□ -2.36
SGD1YLR336C PDR11P40550 1411 aa0.32□□□□□ -2.36
SGD1YLR336C IRA1P18963 3092 aa0.32□□□□□ -2.36
SGD1YLR336C POP7P38291 140 aa0.31□□□□□ -2.36
SGD1YLR336C COX23P38824 151 aa0.31□□□□□ -2.36
SGD1YLR336C CYB5P40312 120 aa0.31□□□□□ -2.36
SGD1YLR336C YBT1P32386 1661 aa0.31□□□□□ -2.36
SGD1YLR336C YGL041C-BQ3E750 60 aa0.31□□□□□ -2.36
SGD1YLR336C FIG2P25653 1609 aa0.3□□□□□ -2.36
SGD1YLR336C MRPS12P53732 153 aa0.3□□□□□ -2.36
SGD1YLR336C ARL3Q02804 198 aa0.3□□□□□ -2.36
SGD1YLR336C YPL261CQ08976 102 aa0.3□□□□□ -2.36
SGD1YLR336C YLR099W-AQ3E798 87 aa0.3□□□□□ -2.36
SGD1YLR336C SPC24Q04477 213 aa0.3□□□□□ -2.36
SGD1YLR336C YLR118CQ12354 227 aa0.3□□□□□ -2.36
SGD1YLR336C PCC1Q3E833 88 aa0.3□□□□□ -2.36
SGD1YLR336C OST5Q92316 86 aa0.3□□□□□ -2.36
SGD1YLR336C SEC7P11075 2009 aaKnown RBP0.3□□□□□ -2.36
SGD1YLR336C YEA6P39953 335 aa0.29□□□□□ -2.36
SGD1YLR336C SLO1Q3E784 85 aa0.29□□□□□ -2.36
SGD1YLR336C PAU24P38155 120 aa0.29□□□□□ -2.36
SGD1YLR336C YIR020CP40575 100 aa0.29□□□□□ -2.36
SGD1YLR336C FAS2P19097 1887 aaKnown RBP0.28□□□□□ -2.36
SGD1YLR336C RPB11P38902 120 aa0.28□□□□□ -2.37
SGD1YLR336C TDA2P40045 126 aa0.28□□□□□ -2.37
SGD1YLR336C AIM11P87275 137 aa0.28□□□□□ -2.37
SGD1YLR336C TY2B-BQ12491 1770 aa0.27□□□□□ -2.37
SGD1YLR336C PAU2P32612 120 aa0.27□□□□□ -2.37
SGD1YLR336C YER187WP40102 141 aa0.27□□□□□ -2.37
SGD1YLR336C VMA7P39111 118 aa0.27□□□□□ -2.37
SGD1YLR336C VPS55P47111 140 aa0.27□□□□□ -2.37
SGD1YLR336C RPL22BP56628 122 aaKnown RBP0.27□□□□□ -2.37
SGD1YLR336C FRQ1Q06389 190 aa0.27□□□□□ -2.37
SGD1YLR336C URB1P34241 1764 aaKnown RBP0.26□□□□□ -2.37
SGD1YLR336C HMRA2P0CY13 119 aa0.26□□□□□ -2.37
SGD1YLR336C RPS29BP41058 56 aaKnown RBP0.26□□□□□ -2.37
SGD1YLR336C SNN1P48232 102 aa0.26□□□□□ -2.37
SGD1YLR336C ESP1Q03018 1630 aa0.26□□□□□ -2.37
SGD1YLR336C YAR029WP39549 74 aa0.25□□□□□ -2.37
SGD1YLR336C YLR363W-AQ3E747 85 aa0.25□□□□□ -2.37
SGD1YLR336C YLR255CO13574 117 aa0.25□□□□□ -2.37
SGD1YLR336C YCR099CP25657 155 aa0.25□□□□□ -2.37
SGD1YLR336C TY2B-LR1P0C2J3 1770 aa0.25□□□□□ -2.37
SGD1YLR336C TY2B-FP0CX63 1770 aa0.25□□□□□ -2.37
SGD1YLR336C TY2B-GR2P0CX64 1770 aa0.25□□□□□ -2.37
SGD1YLR336C TY2B-CP25384 1770 aa0.25□□□□□ -2.37
SGD1YLR336C TY2B-DR2Q03494 1770 aa0.25□□□□□ -2.37
SGD1YLR336C TY2B-OR1Q12113 1770 aa0.25□□□□□ -2.37
SGD1YLR336C TY2B-DR1Q12472 1770 aa0.25□□□□□ -2.37
SGD1YLR336C TY2B-OR2Q12501 1770 aa0.25□□□□□ -2.37
SGD1YLR336C YDR010CQ12426 110 aa0.24□□□□□ -2.37
SGD1YLR336C YLR042CQ07990 161 aa0.24□□□□□ -2.37
SGD1YLR336C POL2P21951 2222 aaKnown RBP0.24□□□□□ -2.37
SGD1YLR336C NUP159P40477 1460 aa0.23□□□□□ -2.37
SGD1YLR336C PAM16P42949 149 aa0.23□□□□□ -2.37
SGD1YLR336C DAD1Q12248 94 aa0.23□□□□□ -2.37
SGD1YLR336C YOL164W-AQ3E7A5 60 aa0.23□□□□□ -2.37
SGD1YLR336C TY1B-BRQ12193 1756 aa0.23□□□□□ -2.37
SGD1YLR336C TY1B-GR3Q12316 1755 aa0.23□□□□□ -2.37
SGD1YLR336C TY1B-ORQ92393 1755 aa0.23□□□□□ -2.37
SGD1YLR336C FLO1P32768 1537 aa0.23□□□□□ -2.37
SGD1YLR336C ADK1P07170 222 aaKnown RBP0.22□□□□□ -2.37
SGD1YLR336C TY3B-IQ7LHG5 1498 aaKnown RBP0.22□□□□□ -2.37
SGD1YLR336C PAU19P0CE85 124 aa0.22□□□□□ -2.37
SGD1YLR336C PAU3P25610 124 aa0.22□□□□□ -2.37
SGD1YLR336C WIP1Q2V2P8 89 aa0.22□□□□□ -2.37
SGD1YLR336C YLR365WQ7LIF2 110 aa0.22□□□□□ -2.37
SGD1YLR336C PDR12Q02785 1511 aa0.22□□□□□ -2.37
SGD1YLR336C TY4B-HP0C2J7 1802 aa0.22□□□□□ -2.37
SGD1YLR336C YHR173CP38864 112 aa0.21□□□□□ -2.38
SGD1YLR336C GEA1P47102 1408 aaPredicted RBP0.21□□□□□ -2.38
SGD1YLR336C MYO1P08964 1928 aa0.2□□□□□ -2.38
SGD1YLR336C TY2B-DR3Q07791 1770 aaKnown RBP0.2□□□□□ -2.38
SGD1YLR336C GCV3P39726 170 aaPredicted RBP0.2□□□□□ -2.38
SGD1YLR336C APS2Q00381 147 aa0.2□□□□□ -2.38
SGD1YLR336C YBR072C-AQ3E794 53 aa0.2□□□□□ -2.38
SGD1YLR336C SEN1Q00416 2231 aaKnown RBP0.2□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms