RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W UBC4P15731 148 aa1.56□□□□□ -2.16
SPC42YKL042W UBC5P15732 148 aa1.56□□□□□ -2.16
SPC42YKL042W IMP2P46972 177 aa1.56□□□□□ -2.16
SPC42YKL042W CCW14O13547 238 aa1.55□□□□□ -2.16
SPC42YKL042W SRB6P32570 121 aa1.55□□□□□ -2.16
SPC42YKL042W SEC7P11075 2009 aaKnown RBP1.55□□□□□ -2.16
SPC42YKL042W YRF1-6P53819 1859 aa1.54□□□□□ -2.16
SPC42YKL042W PRP8P33334 2413 aaKnown RBP1.54□□□□□ -2.16
SPC42YKL042W AUA1P32450 94 aa1.54□□□□□ -2.16
SPC42YKL042W KRE5P22023 1365 aa1.53□□□□□ -2.16
SPC42YKL042W TY3B-IQ7LHG5 1498 aaKnown RBP1.53□□□□□ -2.16
SPC42YKL042W YLR255CO13574 117 aa1.52□□□□□ -2.17
SPC42YKL042W YDR210WQ03482 75 aa1.5□□□□□ -2.17
SPC42YKL042W PDR11P40550 1411 aa1.49□□□□□ -2.17
SPC42YKL042W GEA1P47102 1408 aaPredicted RBP1.49□□□□□ -2.17
SPC42YKL042W YIL086CP40503 102 aa1.49□□□□□ -2.17
SPC42YKL042W FYV7Q12247 151 aa1.48□□□□□ -2.17
SPC42YKL042W YPL038W-AQ3E7B4 63 aa1.48□□□□□ -2.17
SPC42YKL042W GCV3P39726 170 aaPredicted RBP1.47□□□□□ -2.17
SPC42YKL042W MIX14Q04341 121 aa1.47□□□□□ -2.17
SPC42YKL042W YDR010CQ12426 110 aa1.47□□□□□ -2.17
SPC42YKL042W SHU1P38751 150 aa1.46□□□□□ -2.18
SPC42YKL042W YHR173CP38864 112 aa1.45□□□□□ -2.18
SPC42YKL042W YBR072C-AQ3E794 53 aa1.45□□□□□ -2.18
SPC42YKL042W TOP2P06786 1428 aaKnown RBP1.45□□□□□ -2.18
SPC42YKL042W YCR095W-AQ3E787 52 aa1.44□□□□□ -2.18
SPC42YKL042W BUD4P47136 1447 aa1.43□□□□□ -2.18
SPC42YKL042W COX19Q3E731 98 aa1.43□□□□□ -2.18
SPC42YKL042W TY4B-HP0C2J7 1802 aa1.43□□□□□ -2.18
SPC42YKL042W COX12Q01519 83 aa1.42□□□□□ -2.18
SPC42YKL042W KSH1Q8TGJ3 72 aa1.42□□□□□ -2.18
SPC42YKL042W BPT1P14772 1559 aa1.42□□□□□ -2.18
SPC42YKL042W BRR2P32639 2163 aaKnown RBP1.41□□□□□ -2.18
SPC42YKL042W PAU5P43575 122 aa1.41□□□□□ -2.18
SPC42YKL042W RSM19P53733 91 aaPredicted RBP1.41□□□□□ -2.18
SPC42YKL042W GEA2P39993 1459 aaKnown RBP1.4□□□□□ -2.19
SPC42YKL042W BNI1P41832 1953 aa1.39□□□□□ -2.19
SPC42YKL042W MPC2P38857 129 aa1.39□□□□□ -2.19
SPC42YKL042W ROX3P25046 220 aa1.38□□□□□ -2.19
SPC42YKL042W SNA2P56508 79 aa1.38□□□□□ -2.19
SPC42YKL042W REV3P14284 1504 aa1.38□□□□□ -2.19
SPC42YKL042W SRB8P25648 1427 aa1.38□□□□□ -2.19
SPC42YKL042W MRX7P53869 86 aa1.36□□□□□ -2.19
SPC42YKL042W BLM10P43583 2143 aa1.36□□□□□ -2.19
SPC42YKL042W POL2P21951 2222 aaKnown RBP1.35□□□□□ -2.19
SPC42YKL042W YHL005CP38752 130 aa1.34□□□□□ -2.19
SPC42YKL042W YOR289WQ12012 251 aaPredicted RBP1.34□□□□□ -2.19
SPC42YKL042W SNF2P22082 1703 aa1.34□□□□□ -2.2
SPC42YKL042W CAT8P39113 1433 aa1.33□□□□□ -2.2
SPC42YKL042W PAU6P0CE90 120 aa1.33□□□□□ -2.2
SPC42YKL042W PAU18P0CE91 120 aa1.33□□□□□ -2.2
SPC42YKL042W MRP17P28778 131 aa1.32□□□□□ -2.2
SPC42YKL042W SSN2P38931 1420 aa1.32□□□□□ -2.2
SPC42YKL042W ICY1Q04329 127 aa1.31□□□□□ -2.2
SPC42YKL042W NTE1Q04958 1679 aa1.3□□□□□ -2.2
SPC42YKL042W MRPL38P35996 138 aaPredicted RBP1.3□□□□□ -2.2
SPC42YKL042W YOL164W-AQ3E7A5 60 aa1.3□□□□□ -2.2
SPC42YKL042W HMRA1P0CY11 126 aa1.29□□□□□ -2.2
SPC42YKL042W RPS29BP41058 56 aaKnown RBP1.29□□□□□ -2.2
SPC42YKL042W ZEO1Q08245 113 aa1.29□□□□□ -2.2
SPC42YKL042W YBL071CP38185 102 aa1.28□□□□□ -2.2
SPC42YKL042W YBR292CP38357 123 aa1.28□□□□□ -2.2
SPC42YKL042W EMC5P40540 141 aa1.28□□□□□ -2.2
SPC42YKL042W YPL225WQ08971 146 aaKnown RBP1.28□□□□□ -2.2
SPC42YKL042W YNR034W-AQ3E841 98 aa1.28□□□□□ -2.2
SPC42YKL042W RPS11AP0CX47 156 aaKnown RBP1.27□□□□□ -2.21
SPC42YKL042W RPS11BP0CX48 156 aaKnown RBP1.27□□□□□ -2.21
SPC42YKL042W RSF2P46974 1380 aa1.26□□□□□ -2.21
SPC42YKL042W MYO1P08964 1928 aa1.25□□□□□ -2.21
SPC42YKL042W PAU20Q08322 120 aa1.25□□□□□ -2.21
SPC42YKL042W RRT15Q3E811 62 aa1.25□□□□□ -2.21
SPC42YKL042W AIM19P40502 157 aa1.24□□□□□ -2.21
SPC42YKL042W RPA12P32529 125 aaKnown RBP1.22□□□□□ -2.21
SPC42YKL042W MSL1P40567 111 aaPredicted RBP1.21□□□□□ -2.22
SPC42YKL042W NHP10Q03435 203 aa1.21□□□□□ -2.22
SPC42YKL042W PAU1P0CE88 120 aa1.2□□□□□ -2.22
SPC42YKL042W PAU14P0CE89 120 aa1.2□□□□□ -2.22
SPC42YKL042W PAU8P0CE92 120 aa1.2□□□□□ -2.22
SPC42YKL042W PAU11P0CE93 120 aa1.2□□□□□ -2.22
SPC42YKL042W PAU13P38725 120 aa1.2□□□□□ -2.22
SPC42YKL042W SPC1P46965 94 aa1.2□□□□□ -2.22
SPC42YKL042W PAU10Q03050 120 aa1.2□□□□□ -2.22
SPC42YKL042W PAU9Q3E770 120 aa1.2□□□□□ -2.22
SPC42YKL042W YRF1-1P0CX20 1796 aa1.19□□□□□ -2.22
SPC42YKL042W YRF1-5P0CX21 1796 aa1.19□□□□□ -2.22
SPC42YKL042W YRF1-8P0CX22 1796 aa1.19□□□□□ -2.22
SPC42YKL042W RSM18P40033 138 aa1.18□□□□□ -2.22
SPC42YKL042W FAS2P19097 1887 aaKnown RBP1.18□□□□□ -2.22
SPC42YKL042W RPA190P10964 1664 aaKnown RBP1.16□□□□□ -2.22
SPC42YKL042W RIM15P43565 1770 aa1.16□□□□□ -2.22
SPC42YKL042W PAU4P53427 120 aa1.15□□□□□ -2.23
SPC42YKL042W SNU13P39990 126 aaKnown RBP1.13□□□□□ -2.23
SPC42YKL042W YNL190WP53872 204 aa1.13□□□□□ -2.23
SPC42YKL042W SUS1Q6WNK7 96 aa1.12□□□□□ -2.23
SPC42YKL042W YRF1-2P40105 1681 aa1.11□□□□□ -2.23
SPC42YKL042W YDR029WQ12111 104 aa1.11□□□□□ -2.23
SPC42YKL042W YDR042CQ03205 200 aa1.1□□□□□ -2.23
SPC42YKL042W TY1B-BLQ12490 1755 aa1.08□□□□□ -2.24
SPC42YKL042W RPC10P40422 70 aa1.08□□□□□ -2.24
SPC42YKL042W PDR10P51533 1564 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms