RNA–Protein interactions for RNA: YJL173C

RFA3, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA3, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA3YJL173C YIR021W-AQ3E739 70 aa0.28□□□□□ -2.36
RFA3YJL173C CCW14O13547 238 aa0.27□□□□□ -2.37
RFA3YJL173C MPC2P38857 129 aa0.27□□□□□ -2.37
RFA3YJL173C TOP2P06786 1428 aaKnown RBP0.27□□□□□ -2.37
RFA3YJL173C YLR255CO13574 117 aa0.26□□□□□ -2.37
RFA3YJL173C YNL190WP53872 204 aa0.26□□□□□ -2.37
RFA3YJL173C COX12Q01519 83 aa0.26□□□□□ -2.37
RFA3YJL173C RUB1Q03919 77 aa0.26□□□□□ -2.37
RFA3YJL173C YLR419WQ06698 1435 aaKnown RBP0.25□□□□□ -2.37
RFA3YJL173C YPL038W-AQ3E7B4 63 aa0.25□□□□□ -2.37
RFA3YJL173C RPA12P32529 125 aaKnown RBP0.24□□□□□ -2.37
RFA3YJL173C RPO41P13433 1351 aaKnown RBP0.23□□□□□ -2.37
RFA3YJL173C PAU15P40585 124 aa0.23□□□□□ -2.37
RFA3YJL173C SPP41P38904 1435 aa0.22□□□□□ -2.37
RFA3YJL173C YCR101CP25607 182 aa0.22□□□□□ -2.37
RFA3YJL173C RIM15P43565 1770 aa0.2□□□□□ -2.38
RFA3YJL173C PAU16P35994 123 aa0.2□□□□□ -2.38
RFA3YJL173C YDR210WQ03482 75 aa0.2□□□□□ -2.38
RFA3YJL173C RPS11AP0CX47 156 aaKnown RBP0.19□□□□□ -2.38
RFA3YJL173C RPS11BP0CX48 156 aaKnown RBP0.19□□□□□ -2.38
RFA3YJL173C YBR292CP38357 123 aa0.19□□□□□ -2.38
RFA3YJL173C POL2P21951 2222 aaKnown RBP0.18□□□□□ -2.38
RFA3YJL173C MRP17P28778 131 aa0.18□□□□□ -2.38
RFA3YJL173C BUD23P25627 275 aaPredicted RBP0.17□□□□□ -2.38
RFA3YJL173C SRB8P25648 1427 aa0.17□□□□□ -2.38
RFA3YJL173C MRX7P53869 86 aa0.17□□□□□ -2.38
RFA3YJL173C YOS1Q3E834 85 aa0.17□□□□□ -2.38
RFA3YJL173C YNL198CP40166 100 aa0.16□□□□□ -2.38
RFA3YJL173C YOR304C-AO14468 76 aa0.15□□□□□ -2.39
RFA3YJL173C SNA2P56508 79 aa0.15□□□□□ -2.39
RFA3YJL173C SSN2P38931 1420 aa0.14□□□□□ -2.39
RFA3YJL173C GNA1P43577 159 aaPredicted RBP0.14□□□□□ -2.39
RFA3YJL173C ICY1Q04329 127 aa0.14□□□□□ -2.39
RFA3YJL173C YCR095W-AQ3E787 52 aa0.14□□□□□ -2.39
RFA3YJL173C NTE1Q04958 1679 aa0.12□□□□□ -2.39
RFA3YJL173C LYS2P07702 1392 aa0.12□□□□□ -2.39
RFA3YJL173C YER039C-AP0CD97 72 aa0.12□□□□□ -2.39
RFA3YJL173C MRPL38P35996 138 aaPredicted RBP0.12□□□□□ -2.39
RFA3YJL173C YMR090WQ04304 227 aaKnown RBP0.11□□□□□ -2.39
RFA3YJL173C PAU20Q08322 120 aa0.11□□□□□ -2.39
RFA3YJL173C BPT1P14772 1559 aa0.11□□□□□ -2.39
RFA3YJL173C YRF1-2P40105 1681 aa0.1□□□□□ -2.39
RFA3YJL173C TY1B-BLQ12490 1755 aa0.09□□□□□ -2.39
RFA3YJL173C MIC10Q96VH5 97 aa0.09□□□□□ -2.4
RFA3YJL173C KRE5P22023 1365 aa0.08□□□□□ -2.4
RFA3YJL173C AIM19P40502 157 aa0.08□□□□□ -2.4
RFA3YJL173C RSM18P40033 138 aa0.07□□□□□ -2.4
RFA3YJL173C YMR103CQ04436 120 aa0.07□□□□□ -2.4
RFA3YJL173C UBC4P15731 148 aa0.06□□□□□ -2.4
RFA3YJL173C PDX3P38075 228 aaKnown RBP0.06□□□□□ -2.4
RFA3YJL173C TY3B-IQ7LHG5 1498 aaKnown RBP0.05□□□□□ -2.4
RFA3YJL173C YFR009W-AP0C5M9 85 aa0.05□□□□□ -2.4
RFA3YJL173C UBC5P15732 148 aa0.05□□□□□ -2.4
RFA3YJL173C MIX14Q04341 121 aa0.05□□□□□ -2.4
RFA3YJL173C RPC10P40422 70 aa0.04□□□□□ -2.4
RFA3YJL173C RPL38P49167 78 aaKnown RBP0.04□□□□□ -2.4
RFA3YJL173C PAU1P0CE88 120 aa0.03□□□□□ -2.4
RFA3YJL173C PAU14P0CE89 120 aa0.03□□□□□ -2.4
RFA3YJL173C PAU6P0CE90 120 aa0.03□□□□□ -2.4
RFA3YJL173C PAU18P0CE91 120 aa0.03□□□□□ -2.4
RFA3YJL173C PAU8P0CE92 120 aa0.03□□□□□ -2.4
RFA3YJL173C PAU11P0CE93 120 aa0.03□□□□□ -2.4
RFA3YJL173C ROX3P25046 220 aa0.03□□□□□ -2.4
RFA3YJL173C YBR016WP38216 128 aa0.03□□□□□ -2.4
RFA3YJL173C PAU13P38725 120 aa0.03□□□□□ -2.4
RFA3YJL173C RPS12P48589 143 aaKnown RBP0.03□□□□□ -2.4
RFA3YJL173C PAU10Q03050 120 aa0.03□□□□□ -2.4
RFA3YJL173C PAU9Q3E770 120 aa0.03□□□□□ -2.4
RFA3YJL173C YNR034W-AQ3E841 98 aa0.03□□□□□ -2.4
RFA3YJL173C GEA1P47102 1408 aaPredicted RBP0.03□□□□□ -2.41
RFA3YJL173C MDS3P53094 1487 aa0.03□□□□□ -2.41
RFA3YJL173C EMC5P40540 141 aa0.02□□□□□ -2.41
RFA3YJL173C SGF11Q03067 99 aa0.02□□□□□ -2.41
RFA3YJL173C YBL071CP38185 102 aa0.01□□□□□ -2.41
RFA3YJL173C YBR090CP38253 122 aa0.01□□□□□ -2.41
RFA3YJL173C YHL005CP38752 130 aa0.01□□□□□ -2.41
RFA3YJL173C PAU5P43575 122 aa0.01□□□□□ -2.41
RFA3YJL173C TSC11P40061 1430 aa0.01□□□□□ -2.41
RFA3YJL173C YRF1-1P0CX20 1796 aa0.01□□□□□ -2.41
RFA3YJL173C YRF1-5P0CX21 1796 aa0.01□□□□□ -2.41
RFA3YJL173C YRF1-8P0CX22 1796 aa0.01□□□□□ -2.41
RFA3YJL173C YJR107C-AP0CT86 78 aa0□□□□□ -2.41
RFA3YJL173C LHP1P33399 275 aaKnown RBP-0.01□□□□□ -2.41
RFA3YJL173C COX7P10174 60 aa-0.02□□□□□ -2.41
RFA3YJL173C PAU4P53427 120 aa-0.02□□□□□ -2.41
RFA3YJL173C BUD4P47136 1447 aa-0.03□□□□□ -2.41
RFA3YJL173C RGI1P40043 161 aaPredicted RBP-0.03□□□□□ -2.41
RFA3YJL173C RSM19P53733 91 aaPredicted RBP-0.03□□□□□ -2.41
RFA3YJL173C YIL134C-AQ45U18 67 aa-0.03□□□□□ -2.41
RFA3YJL173C CAT8P39113 1433 aa-0.04□□□□□ -2.42
RFA3YJL173C YER137CP40083 148 aaKnown RBP-0.05□□□□□ -2.42
RFA3YJL173C PDR11P40550 1411 aa-0.05□□□□□ -2.42
RFA3YJL173C YBR056W-AI2HB52 66 aa-0.06□□□□□ -2.42
RFA3YJL173C GEA2P39993 1459 aaKnown RBP-0.06□□□□□ -2.42
RFA3YJL173C RSF2P46974 1380 aa-0.06□□□□□ -2.42
RFA3YJL173C YNL042W-BQ3E7Z2 85 aa-0.07□□□□□ -2.42
RFA3YJL173C REV3P14284 1504 aa-0.08□□□□□ -2.42
RFA3YJL173C SNU13P39990 126 aaKnown RBP-0.08□□□□□ -2.42
RFA3YJL173C YOR289WQ12012 251 aaPredicted RBP-0.08□□□□□ -2.42
RFA3YJL173C SPC1P46965 94 aa-0.09□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms