RNA–Protein interactions for RNA: YIL167W

SDL1, Transcript of Open reading frame unlikely to produce a functional protein in S288C, yeast

Gene SDL1, Length 633 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDL1	YIL167W	YPL038W-A	Q3E7B4	63 aa		0.52	□□□□□ -2.33
SDL1	YIL167W	SEC7	P11075	2009 aa	Known RBP	0.51	□□□□□ -2.33
SDL1	YIL167W	YER137C	P40083	148 aa	Known RBP	0.51	□□□□□ -2.33
SDL1	YIL167W	GNA1	P43577	159 aa	Predicted RBP	0.51	□□□□□ -2.33
SDL1	YIL167W	SWC7	Q06707	132 aa		0.51	□□□□□ -2.33
SDL1	YIL167W	TOP2	P06786	1428 aa	Known RBP	0.5	□□□□□ -2.33
SDL1	YIL167W	YLR419W	Q06698	1435 aa	Known RBP	0.5	□□□□□ -2.33
SDL1	YIL167W	LYS2	P07702	1392 aa		0.5	□□□□□ -2.33
SDL1	YIL167W	RPS29B	P41058	56 aa	Known RBP	0.5	□□□□□ -2.33
SDL1	YIL167W	MIC10	Q96VH5	97 aa		0.5	□□□□□ -2.33
SDL1	YIL167W	TY4B-H	P0C2J7	1802 aa		0.5	□□□□□ -2.33
SDL1	YIL167W	KRE5	P22023	1365 aa		0.49	□□□□□ -2.33
SDL1	YIL167W	YCR095W-A	Q3E787	52 aa		0.49	□□□□□ -2.33
SDL1	YIL167W	YCR101C	P25607	182 aa		0.48	□□□□□ -2.33
SDL1	YIL167W	MPC2	P38857	129 aa		0.48	□□□□□ -2.33
SDL1	YIL167W	RPS12	P48589	143 aa	Known RBP	0.48	□□□□□ -2.33
SDL1	YIL167W	SNA2	P56508	79 aa		0.48	□□□□□ -2.33
SDL1	YIL167W	YMR103C	Q04436	120 aa		0.48	□□□□□ -2.33
SDL1	YIL167W	YOS1	Q3E834	85 aa		0.48	□□□□□ -2.33
SDL1	YIL167W	BNI1	P41832	1953 aa		0.48	□□□□□ -2.33
SDL1	YIL167W	CCW14	O13547	238 aa		0.47	□□□□□ -2.33
SDL1	YIL167W	MRX7	P53869	86 aa		0.47	□□□□□ -2.33
SDL1	YIL167W	BLM10	P43583	2143 aa		0.47	□□□□□ -2.33
SDL1	YIL167W	PAU5	P43575	122 aa		0.46	□□□□□ -2.34
SDL1	YIL167W	COX12	Q01519	83 aa		0.46	□□□□□ -2.34
SDL1	YIL167W	YDR210W	Q03482	75 aa		0.46	□□□□□ -2.34
SDL1	YIL167W	YMR090W	Q04304	227 aa	Known RBP	0.46	□□□□□ -2.34
SDL1	YIL167W	BRR2	P32639	2163 aa	Known RBP	0.45	□□□□□ -2.34
SDL1	YIL167W	PAU6	P0CE90	120 aa		0.45	□□□□□ -2.34
SDL1	YIL167W	PAU18	P0CE91	120 aa		0.45	□□□□□ -2.34
SDL1	YIL167W	FAS2	P19097	1887 aa	Known RBP	0.44	□□□□□ -2.34
SDL1	YIL167W	RPS11A	P0CX47	156 aa	Known RBP	0.44	□□□□□ -2.34
SDL1	YIL167W	RPS11B	P0CX48	156 aa	Known RBP	0.44	□□□□□ -2.34
SDL1	YIL167W	UBC4	P15731	148 aa		0.44	□□□□□ -2.34
SDL1	YIL167W	RSM19	P53733	91 aa	Predicted RBP	0.44	□□□□□ -2.34
SDL1	YIL167W	COX19	Q3E731	98 aa		0.44	□□□□□ -2.34
SDL1	YIL167W	MYO1	P08964	1928 aa		0.44	□□□□□ -2.34
SDL1	YIL167W	YBL071C	P38185	102 aa		0.43	□□□□□ -2.34
SDL1	YIL167W	PAU20	Q08322	120 aa		0.43	□□□□□ -2.34
SDL1	YIL167W	SRB8	P25648	1427 aa		0.43	□□□□□ -2.34
SDL1	YIL167W	TSC11	P40061	1430 aa		0.42	□□□□□ -2.34
SDL1	YIL167W	ROX3	P25046	220 aa		0.42	□□□□□ -2.34
SDL1	YIL167W	RGI1	P40043	161 aa	Predicted RBP	0.42	□□□□□ -2.34
SDL1	YIL167W	ICY1	Q04329	127 aa		0.42	□□□□□ -2.34
SDL1	YIL167W	YNR034W-A	Q3E841	98 aa		0.42	□□□□□ -2.34
SDL1	YIL167W	PDR11	P40550	1411 aa		0.41	□□□□□ -2.34
SDL1	YIL167W	UBC5	P15732	148 aa		0.41	□□□□□ -2.34
SDL1	YIL167W	MRP17	P28778	131 aa		0.41	□□□□□ -2.34
SDL1	YIL167W	MRPL38	P35996	138 aa	Predicted RBP	0.41	□□□□□ -2.34
SDL1	YIL167W	YBR090C	P38253	122 aa		0.41	□□□□□ -2.34
SDL1	YIL167W	YNL190W	P53872	204 aa		0.41	□□□□□ -2.34
SDL1	YIL167W	MDS3	P53094	1487 aa		0.41	□□□□□ -2.34
SDL1	YIL167W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.41	□□□□□ -2.34
SDL1	YIL167W	SSN2	P38931	1420 aa		0.4	□□□□□ -2.34
SDL1	YIL167W	PAU1	P0CE88	120 aa		0.4	□□□□□ -2.35
SDL1	YIL167W	PAU14	P0CE89	120 aa		0.4	□□□□□ -2.35
SDL1	YIL167W	PAU8	P0CE92	120 aa		0.4	□□□□□ -2.35
SDL1	YIL167W	PAU11	P0CE93	120 aa		0.4	□□□□□ -2.35
SDL1	YIL167W	PAU13	P38725	120 aa		0.4	□□□□□ -2.35
SDL1	YIL167W	PAU10	Q03050	120 aa		0.4	□□□□□ -2.35
SDL1	YIL167W	PAU9	Q3E770	120 aa		0.4	□□□□□ -2.35
SDL1	YIL167W	YBR292C	P38357	123 aa		0.39	□□□□□ -2.35
SDL1	YIL167W	MIX14	Q04341	121 aa		0.39	□□□□□ -2.35
SDL1	YIL167W	RPC10	P40422	70 aa		0.38	□□□□□ -2.35
SDL1	YIL167W	SPC1	P46965	94 aa		0.38	□□□□□ -2.35
SDL1	YIL167W	YOR289W	Q12012	251 aa	Predicted RBP	0.38	□□□□□ -2.35
SDL1	YIL167W	FYV7	Q12247	151 aa		0.38	□□□□□ -2.35
SDL1	YIL167W	RIM15	P43565	1770 aa		0.37	□□□□□ -2.35
SDL1	YIL167W	HMRA1	P0CY11	126 aa		0.37	□□□□□ -2.35
SDL1	YIL167W	RSM18	P40033	138 aa		0.37	□□□□□ -2.35
SDL1	YIL167W	YNL198C	P40166	100 aa		0.37	□□□□□ -2.35
SDL1	YIL167W	PAU4	P53427	120 aa		0.37	□□□□□ -2.35
SDL1	YIL167W	NHP10	Q03435	203 aa		0.37	□□□□□ -2.35
SDL1	YIL167W	GEA1	P47102	1408 aa	Predicted RBP	0.37	□□□□□ -2.35
SDL1	YIL167W	POL2	P21951	2222 aa	Known RBP	0.37	□□□□□ -2.35
SDL1	YIL167W	YRF1-1	P0CX20	1796 aa		0.37	□□□□□ -2.35
SDL1	YIL167W	YRF1-5	P0CX21	1796 aa		0.37	□□□□□ -2.35
SDL1	YIL167W	YRF1-8	P0CX22	1796 aa		0.37	□□□□□ -2.35
SDL1	YIL167W	AIM19	P40502	157 aa		0.36	□□□□□ -2.35
SDL1	YIL167W	EMC5	P40540	141 aa		0.36	□□□□□ -2.35
SDL1	YIL167W	KSH1	Q8TGJ3	72 aa		0.36	□□□□□ -2.35
SDL1	YIL167W	NTE1	Q04958	1679 aa		0.36	□□□□□ -2.35
SDL1	YIL167W	YJR107C-A	P0CT86	78 aa		0.35	□□□□□ -2.35
SDL1	YIL167W	ATX1	P38636	73 aa		0.35	□□□□□ -2.35
SDL1	YIL167W	BUD4	P47136	1447 aa		0.35	□□□□□ -2.35
SDL1	YIL167W	REV3	P14284	1504 aa		0.34	□□□□□ -2.35
SDL1	YIL167W	BPT1	P14772	1559 aa		0.34	□□□□□ -2.36
SDL1	YIL167W	RRT15	Q3E811	62 aa		0.34	□□□□□ -2.36
SDL1	YIL167W	YHL005C	P38752	130 aa		0.33	□□□□□ -2.36
SDL1	YIL167W	GEA2	P39993	1459 aa	Known RBP	0.33	□□□□□ -2.36
SDL1	YIL167W	YRF1-2	P40105	1681 aa		0.33	□□□□□ -2.36
SDL1	YIL167W	RSF2	P46974	1380 aa		0.32	□□□□□ -2.36
SDL1	YIL167W	TY1B-BL	Q12490	1755 aa		0.32	□□□□□ -2.36
SDL1	YIL167W	CAT8	P39113	1433 aa		0.31	□□□□□ -2.36
SDL1	YIL167W	YFR009W-A	P0C5M9	85 aa		0.31	□□□□□ -2.36
SDL1	YIL167W	SNU13	P39990	126 aa	Known RBP	0.31	□□□□□ -2.36
SDL1	YIL167W	MSL1	P40567	111 aa	Predicted RBP	0.31	□□□□□ -2.36
SDL1	YIL167W	RPL38	P49167	78 aa	Known RBP	0.31	□□□□□ -2.36
SDL1	YIL167W	YIL134C-A	Q45U18	67 aa		0.31	□□□□□ -2.36
SDL1	YIL167W	Q0032	Q9ZZX7	96 aa		0.31	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms