RNA–Protein interactions for RNA: YIL035C

CKA1, Transcript of Alpha catalytic subunit of casein kinase 2 (CK2), yeast

Gene CKA1, Length 1,119 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKA1	YIL035C	RSM19	P53733	91 aa	Predicted RBP	1.06	□□□□□ -2.24
CKA1	YIL035C	YCL048W-A	Q2V2Q2	79 aa		1.06	□□□□□ -2.24
CKA1	YIL035C	CAT8	P39113	1433 aa		1.06	□□□□□ -2.24
CKA1	YIL035C	MIX14	Q04341	121 aa		1.05	□□□□□ -2.24
CKA1	YIL035C	YOL118C	Q08259	102 aa		1.05	□□□□□ -2.24
CKA1	YIL035C	YRF1-6	P53819	1859 aa		1.05	□□□□□ -2.24
CKA1	YIL035C	YJR128W	P47162	119 aa		1.04	□□□□□ -2.24
CKA1	YIL035C	LCL1	Q02786	101 aa		1.04	□□□□□ -2.24
CKA1	YIL035C	KSH1	Q8TGJ3	72 aa		1.04	□□□□□ -2.24
CKA1	YIL035C	RPL43A	P0CX25	92 aa	Known RBP	1.03	□□□□□ -2.24
CKA1	YIL035C	RPL43B	P0CX26	92 aa		1.03	□□□□□ -2.24
CKA1	YIL035C	IMP2	P46972	177 aa		1.03	□□□□□ -2.24
CKA1	YIL035C	YCR095W-A	Q3E787	52 aa		1.03	□□□□□ -2.24
CKA1	YIL035C	LAA1	P39526	2014 aa		1.03	□□□□□ -2.25
CKA1	YIL035C	EMC5	P40540	141 aa		1.02	□□□□□ -2.25
CKA1	YIL035C	PAU5	P43575	122 aa		1.02	□□□□□ -2.25
CKA1	YIL035C	YOR289W	Q12012	251 aa	Predicted RBP	1.02	□□□□□ -2.25
CKA1	YIL035C	YOR034C-A	Q3E735	80 aa		1.02	□□□□□ -2.25
CKA1	YIL035C	RSF2	P46974	1380 aa		1.01	□□□□□ -2.25
CKA1	YIL035C	RPL37B	P51402	88 aa	Known RBP	1.01	□□□□□ -2.25
CKA1	YIL035C	SNA2	P56508	79 aa		1.01	□□□□□ -2.25
CKA1	YIL035C	YPL038W-A	Q3E7B4	63 aa		1.01	□□□□□ -2.25
CKA1	YIL035C	RPA190	P10964	1664 aa	Known RBP	1	□□□□□ -2.25
CKA1	YIL035C	SEC7	P11075	2009 aa	Known RBP	1	□□□□□ -2.25
CKA1	YIL035C	CCW14	O13547	238 aa		1	□□□□□ -2.25
CKA1	YIL035C	YER188C-A	P0C0V2	99 aa		1	□□□□□ -2.25
CKA1	YIL035C	ROX3	P25046	220 aa		1	□□□□□ -2.25
CKA1	YIL035C	HMRA1	P0CY11	126 aa		0.99	□□□□□ -2.25
CKA1	YIL035C	MSL1	P40567	111 aa	Predicted RBP	0.99	□□□□□ -2.25
CKA1	YIL035C	YCL001W-B	Q96VH2	84 aa		0.99	□□□□□ -2.25
CKA1	YIL035C	BPT1	P14772	1559 aa		0.99	□□□□□ -2.25
CKA1	YIL035C	MYO1	P08964	1928 aa		0.99	□□□□□ -2.25
CKA1	YIL035C	SKI3	P17883	1432 aa	Known RBP	0.98	□□□□□ -2.25
CKA1	YIL035C	YHL005C	P38752	130 aa		0.98	□□□□□ -2.25
CKA1	YIL035C	YDR210W	Q03482	75 aa		0.98	□□□□□ -2.25
CKA1	YIL035C	YDR029W	Q12111	104 aa		0.98	□□□□□ -2.25
CKA1	YIL035C	RRT15	Q3E811	62 aa		0.98	□□□□□ -2.25
CKA1	YIL035C	YLR255C	O13574	117 aa		0.97	□□□□□ -2.25
CKA1	YIL035C	PAU6	P0CE90	120 aa		0.97	□□□□□ -2.25
CKA1	YIL035C	PAU18	P0CE91	120 aa		0.97	□□□□□ -2.25
CKA1	YIL035C	YBL071C	P38185	102 aa		0.97	□□□□□ -2.25
CKA1	YIL035C	GCV3	P39726	170 aa	Predicted RBP	0.97	□□□□□ -2.25
CKA1	YIL035C	YIL086C	P40503	102 aa		0.97	□□□□□ -2.25
CKA1	YIL035C	MRX7	P53869	86 aa		0.97	□□□□□ -2.25
CKA1	YIL035C	SEC16	P48415	2195 aa	Known RBP	0.97	□□□□□ -2.25
CKA1	YIL035C	NTE1	Q04958	1679 aa		0.97	□□□□□ -2.25
CKA1	YIL035C	SRB8	P25648	1427 aa		0.97	□□□□□ -2.25
CKA1	YIL035C	PDR10	P51533	1564 aa		0.96	□□□□□ -2.26
CKA1	YIL035C	BNI1	P41832	1953 aa		0.96	□□□□□ -2.26
CKA1	YIL035C	SHU1	P38751	150 aa		0.96	□□□□□ -2.26
CKA1	YIL035C	COX12	Q01519	83 aa		0.96	□□□□□ -2.26
CKA1	YIL035C	YCR075W-A	Q3E830	75 aa		0.96	□□□□□ -2.26
CKA1	YIL035C	SUS1	Q6WNK7	96 aa		0.96	□□□□□ -2.26
CKA1	YIL035C	YRF1-1	P0CX20	1796 aa		0.96	□□□□□ -2.26
CKA1	YIL035C	YRF1-5	P0CX21	1796 aa		0.96	□□□□□ -2.26
CKA1	YIL035C	YRF1-8	P0CX22	1796 aa		0.96	□□□□□ -2.26
CKA1	YIL035C	TY4B-H	P0C2J7	1802 aa		0.95	□□□□□ -2.26
CKA1	YIL035C	YLR157W-E	P0CF00	54 aa		0.95	□□□□□ -2.26
CKA1	YIL035C	YLR307C-A	Q3E825	87 aa		0.95	□□□□□ -2.26
CKA1	YIL035C	MRP17	P28778	131 aa		0.94	□□□□□ -2.26
CKA1	YIL035C	YHR173C	P38864	112 aa		0.94	□□□□□ -2.26
CKA1	YIL035C	SPC1	P46965	94 aa		0.94	□□□□□ -2.26
CKA1	YIL035C	NHP10	Q03435	203 aa		0.94	□□□□□ -2.26
CKA1	YIL035C	YNR034W-A	Q3E841	98 aa		0.94	□□□□□ -2.26
CKA1	YIL035C	SWR1	Q05471	1514 aa		0.94	□□□□□ -2.26
CKA1	YIL035C	MPC2	P38857	129 aa		0.93	□□□□□ -2.26
CKA1	YIL035C	RSM18	P40033	138 aa		0.93	□□□□□ -2.26
CKA1	YIL035C	PAU20	Q08322	120 aa		0.93	□□□□□ -2.26
CKA1	YIL035C	SSN2	P38931	1420 aa		0.92	□□□□□ -2.26
CKA1	YIL035C	PAU1	P0CE88	120 aa		0.92	□□□□□ -2.26
CKA1	YIL035C	PAU14	P0CE89	120 aa		0.92	□□□□□ -2.26
CKA1	YIL035C	PAU8	P0CE92	120 aa		0.92	□□□□□ -2.26
CKA1	YIL035C	PAU11	P0CE93	120 aa		0.92	□□□□□ -2.26
CKA1	YIL035C	AUA1	P32450	94 aa		0.92	□□□□□ -2.26
CKA1	YIL035C	PAU13	P38725	120 aa		0.92	□□□□□ -2.26
CKA1	YIL035C	SNU13	P39990	126 aa	Known RBP	0.92	□□□□□ -2.26
CKA1	YIL035C	PAU10	Q03050	120 aa		0.92	□□□□□ -2.26
CKA1	YIL035C	ICY1	Q04329	127 aa		0.92	□□□□□ -2.26
CKA1	YIL035C	COX19	Q3E731	98 aa		0.92	□□□□□ -2.26
CKA1	YIL035C	PAU9	Q3E770	120 aa		0.92	□□□□□ -2.26
CKA1	YIL035C	MHF2	Q3E829	80 aa		0.92	□□□□□ -2.26
CKA1	YIL035C	MRPL38	P35996	138 aa	Predicted RBP	0.91	□□□□□ -2.26
CKA1	YIL035C	AIM19	P40502	157 aa		0.91	□□□□□ -2.26
CKA1	YIL035C	PAU4	P53427	120 aa		0.91	□□□□□ -2.26
CKA1	YIL035C	YDR042C	Q03205	200 aa		0.91	□□□□□ -2.26
CKA1	YIL035C	YGL194C-A	Q2V2P6	80 aa		0.91	□□□□□ -2.26
CKA1	YIL035C	YBR072C-A	Q3E794	53 aa		0.91	□□□□□ -2.26
CKA1	YIL035C	ECM12	O13529	151 aa		0.9	□□□□□ -2.27
CKA1	YIL035C	YBR292C	P38357	123 aa		0.9	□□□□□ -2.27
CKA1	YIL035C	ESC1	Q03661	1658 aa	Known RBP	0.9	□□□□□ -2.27
CKA1	YIL035C	BRR2	P32639	2163 aa	Known RBP	0.9	□□□□□ -2.27
CKA1	YIL035C	GDB1	Q06625	1536 aa		0.89	□□□□□ -2.27
CKA1	YIL035C	URA2	P07259	2214 aa	Known RBP	0.89	□□□□□ -2.27
CKA1	YIL035C	YMR082C	Q04276	118 aa		0.89	□□□□□ -2.27
CKA1	YIL035C	POL1	P13382	1468 aa		0.88	□□□□□ -2.27
CKA1	YIL035C	RPS11A	P0CX47	156 aa	Known RBP	0.88	□□□□□ -2.27
CKA1	YIL035C	RPS11B	P0CX48	156 aa	Known RBP	0.88	□□□□□ -2.27
CKA1	YIL035C	YDR010C	Q12426	110 aa		0.88	□□□□□ -2.27
CKA1	YIL035C	NHP2	P32495	156 aa	Predicted RBP	0.87	□□□□□ -2.27
CKA1	YIL035C	SCP1	Q08873	200 aa		0.87	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 75.1 ms