RNA–Protein interactions for RNA: YGL087C

MMS2, Transcript of Ubiquitin-conjugating enzyme variant, yeastyeast

Gene MMS2, Length 414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MMS2YGL087C BUD23P25627 275 aaPredicted RBP0.7□□□□□ -2.3
MMS2YGL087C YOR304C-AO14468 76 aa0.68□□□□□ -2.3
MMS2YGL087C TOP2P06786 1428 aaKnown RBP0.68□□□□□ -2.3
MMS2YGL087C SRB6P32570 121 aa0.68□□□□□ -2.3
MMS2YGL087C SWC7Q06707 132 aa0.68□□□□□ -2.3
MMS2YGL087C CCW14O13547 238 aa0.67□□□□□ -2.3
MMS2YGL087C RPA12P32529 125 aaKnown RBP0.67□□□□□ -2.3
MMS2YGL087C YPL038W-AQ3E7B4 63 aa0.67□□□□□ -2.3
MMS2YGL087C SPP41P38904 1435 aa0.66□□□□□ -2.3
MMS2YGL087C COX19Q3E731 98 aa0.65□□□□□ -2.31
MMS2YGL087C YLR419WQ06698 1435 aaKnown RBP0.64□□□□□ -2.31
MMS2YGL087C POL2P21951 2222 aaKnown RBP0.64□□□□□ -2.31
MMS2YGL087C YER039C-AP0CD97 72 aa0.64□□□□□ -2.31
MMS2YGL087C MPC2P38857 129 aa0.64□□□□□ -2.31
MMS2YGL087C TAO3P40468 2376 aa0.64□□□□□ -2.31
MMS2YGL087C YDR210WQ03482 75 aa0.62□□□□□ -2.31
MMS2YGL087C YCR101CP25607 182 aa0.61□□□□□ -2.31
MMS2YGL087C RUB1Q03919 77 aa0.59□□□□□ -2.31
MMS2YGL087C COX12Q01519 83 aa0.58□□□□□ -2.32
MMS2YGL087C YNL190WP53872 204 aa0.57□□□□□ -2.32
MMS2YGL087C YOS1Q3E834 85 aa0.56□□□□□ -2.32
MMS2YGL087C MIC10Q96VH5 97 aa0.56□□□□□ -2.32
MMS2YGL087C RPS11AP0CX47 156 aaKnown RBP0.55□□□□□ -2.32
MMS2YGL087C RPS11BP0CX48 156 aaKnown RBP0.55□□□□□ -2.32
MMS2YGL087C GNA1P43577 159 aaPredicted RBP0.55□□□□□ -2.32
MMS2YGL087C LYS2P07702 1392 aa0.55□□□□□ -2.32
MMS2YGL087C LHP1P33399 275 aaKnown RBP0.54□□□□□ -2.32
MMS2YGL087C MRX7P53869 86 aa0.53□□□□□ -2.32
MMS2YGL087C YCR095W-AQ3E787 52 aa0.53□□□□□ -2.32
MMS2YGL087C SNA2P56508 79 aa0.51□□□□□ -2.33
MMS2YGL087C YMR103CQ04436 120 aa0.5□□□□□ -2.33
MMS2YGL087C KRE5P22023 1365 aa0.49□□□□□ -2.33
MMS2YGL087C ICY1Q04329 127 aa0.48□□□□□ -2.33
MMS2YGL087C SRB8P25648 1427 aa0.47□□□□□ -2.33
MMS2YGL087C MRPL38P35996 138 aaPredicted RBP0.46□□□□□ -2.34
MMS2YGL087C YMR090WQ04304 227 aaKnown RBP0.46□□□□□ -2.34
MMS2YGL087C UBC4P15731 148 aa0.45□□□□□ -2.34
MMS2YGL087C MRP17P28778 131 aa0.45□□□□□ -2.34
MMS2YGL087C SSN2P38931 1420 aa0.44□□□□□ -2.34
MMS2YGL087C PAU6P0CE90 120 aa0.43□□□□□ -2.34
MMS2YGL087C PAU18P0CE91 120 aa0.43□□□□□ -2.34
MMS2YGL087C YBR292CP38357 123 aa0.43□□□□□ -2.34
MMS2YGL087C PAU5P43575 122 aa0.43□□□□□ -2.34
MMS2YGL087C RPS12P48589 143 aaKnown RBP0.42□□□□□ -2.34
MMS2YGL087C PAU20Q08322 120 aa0.42□□□□□ -2.34
MMS2YGL087C YNL198CP40166 100 aa0.41□□□□□ -2.34
MMS2YGL087C RIM15P43565 1770 aa0.41□□□□□ -2.34
MMS2YGL087C ATX1P38636 73 aa0.4□□□□□ -2.35
MMS2YGL087C YER137CP40083 148 aaKnown RBP0.4□□□□□ -2.35
MMS2YGL087C YNR034W-AQ3E841 98 aa0.39□□□□□ -2.35
MMS2YGL087C ROX3P25046 220 aa0.38□□□□□ -2.35
MMS2YGL087C UBC5P15732 148 aa0.37□□□□□ -2.35
MMS2YGL087C RPC10P40422 70 aa0.37□□□□□ -2.35
MMS2YGL087C YBL071CP38185 102 aa0.36□□□□□ -2.35
MMS2YGL087C RSM18P40033 138 aa0.36□□□□□ -2.35
MMS2YGL087C RSM19P53733 91 aaPredicted RBP0.35□□□□□ -2.35
MMS2YGL087C TSC11P40061 1430 aa0.35□□□□□ -2.35
MMS2YGL087C YBR090CP38253 122 aa0.34□□□□□ -2.36
MMS2YGL087C MIX14Q04341 121 aa0.34□□□□□ -2.36
MMS2YGL087C TY3B-IQ7LHG5 1498 aaKnown RBP0.34□□□□□ -2.36
MMS2YGL087C PAU1P0CE88 120 aa0.32□□□□□ -2.36
MMS2YGL087C PAU14P0CE89 120 aa0.32□□□□□ -2.36
MMS2YGL087C PAU8P0CE92 120 aa0.32□□□□□ -2.36
MMS2YGL087C PAU11P0CE93 120 aa0.32□□□□□ -2.36
MMS2YGL087C PAU13P38725 120 aa0.32□□□□□ -2.36
MMS2YGL087C AIM19P40502 157 aa0.32□□□□□ -2.36
MMS2YGL087C PAU10Q03050 120 aa0.32□□□□□ -2.36
MMS2YGL087C PAU9Q3E770 120 aa0.32□□□□□ -2.36
MMS2YGL087C BPT1P14772 1559 aa0.31□□□□□ -2.36
MMS2YGL087C NTE1Q04958 1679 aa0.29□□□□□ -2.36
MMS2YGL087C YRF1-2P40105 1681 aa0.28□□□□□ -2.36
MMS2YGL087C TY1B-BLQ12490 1755 aa0.27□□□□□ -2.37
MMS2YGL087C YFR009W-AP0C5M9 85 aa0.27□□□□□ -2.37
MMS2YGL087C RGI1P40043 161 aaPredicted RBP0.27□□□□□ -2.37
MMS2YGL087C GEA1P47102 1408 aaPredicted RBP0.27□□□□□ -2.37
MMS2YGL087C YHL005CP38752 130 aa0.25□□□□□ -2.37
MMS2YGL087C EMC5P40540 141 aa0.25□□□□□ -2.37
MMS2YGL087C PAU4P53427 120 aa0.25□□□□□ -2.37
MMS2YGL087C YOR289WQ12012 251 aaPredicted RBP0.25□□□□□ -2.37
MMS2YGL087C KSH1Q8TGJ3 72 aa0.25□□□□□ -2.37
MMS2YGL087C YRF1-1P0CX20 1796 aa0.24□□□□□ -2.37
MMS2YGL087C YRF1-5P0CX21 1796 aa0.24□□□□□ -2.37
MMS2YGL087C YRF1-8P0CX22 1796 aa0.24□□□□□ -2.37
MMS2YGL087C YJR107C-AP0CT86 78 aa0.24□□□□□ -2.37
MMS2YGL087C PDR11P40550 1411 aa0.23□□□□□ -2.37
MMS2YGL087C SPC1P46965 94 aa0.23□□□□□ -2.37
MMS2YGL087C NHP10Q03435 203 aa0.23□□□□□ -2.37
MMS2YGL087C YBR016WP38216 128 aa0.22□□□□□ -2.37
MMS2YGL087C RPL38P49167 78 aaKnown RBP0.22□□□□□ -2.37
MMS2YGL087C MDS3P53094 1487 aa0.22□□□□□ -2.37
MMS2YGL087C HMRA1P0CY11 126 aa0.21□□□□□ -2.38
MMS2YGL087C CAT8P39113 1433 aa0.19□□□□□ -2.38
MMS2YGL087C SGF11Q03067 99 aa0.17□□□□□ -2.38
MMS2YGL087C YIL134C-AQ45U18 67 aa0.17□□□□□ -2.38
MMS2YGL087C YBR056W-AI2HB52 66 aa0.16□□□□□ -2.38
MMS2YGL087C GEA2P39993 1459 aaKnown RBP0.16□□□□□ -2.38
MMS2YGL087C PDX3P38075 228 aaKnown RBP0.14□□□□□ -2.39
MMS2YGL087C BUD4P47136 1447 aa0.13□□□□□ -2.39
MMS2YGL087C YNL042W-BQ3E7Z2 85 aa0.13□□□□□ -2.39
MMS2YGL087C Q0032Q9ZZX7 96 aa0.13□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms