RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C YRF1-1P0CX20 1796 aa0.38□□□□□ -2.35
SMB1YER029C YRF1-5P0CX21 1796 aa0.38□□□□□ -2.35
SMB1YER029C YRF1-8P0CX22 1796 aa0.38□□□□□ -2.35
SMB1YER029C BPT1P14772 1559 aa0.38□□□□□ -2.35
SMB1YER029C PDR10P51533 1564 aa0.38□□□□□ -2.35
SMB1YER029C RSF2P46974 1380 aa0.38□□□□□ -2.35
SMB1YER029C RPL43AP0CX25 92 aaKnown RBP0.38□□□□□ -2.35
SMB1YER029C RPL43BP0CX26 92 aa0.38□□□□□ -2.35
SMB1YER029C MRPL31P14063 131 aaPredicted RBP0.38□□□□□ -2.35
SMB1YER029C UBC5P15732 148 aa0.38□□□□□ -2.35
SMB1YER029C PAU16P35994 123 aa0.38□□□□□ -2.35
SMB1YER029C YBR090CP38253 122 aa0.38□□□□□ -2.35
SMB1YER029C EMC5P40540 141 aa0.38□□□□□ -2.35
SMB1YER029C ICS3P47034 131 aa0.38□□□□□ -2.35
SMB1YER029C YGR164WP53291 111 aa0.38□□□□□ -2.35
SMB1YER029C RSM19P53733 91 aaPredicted RBP0.38□□□□□ -2.35
SMB1YER029C YMR321CQ04898 105 aa0.38□□□□□ -2.35
SMB1YER029C LSM6Q06406 86 aaKnown RBP0.38□□□□□ -2.35
SMB1YER029C FIT3Q08907 204 aa0.38□□□□□ -2.35
SMB1YER029C YLR285C-AQ3E771 56 aa0.38□□□□□ -2.35
SMB1YER029C YOS1Q3E834 85 aa0.38□□□□□ -2.35
SMB1YER029C MIC10Q96VH5 97 aa0.38□□□□□ -2.35
SMB1YER029C UBC4P15731 148 aa0.37□□□□□ -2.35
SMB1YER029C MSL1P40567 111 aaPredicted RBP0.37□□□□□ -2.35
SMB1YER029C YIR020CP40575 100 aa0.37□□□□□ -2.35
SMB1YER029C IMP2P46972 177 aa0.37□□□□□ -2.35
SMB1YER029C SNA2P56508 79 aa0.37□□□□□ -2.35
SMB1YER029C MIX14Q04341 121 aa0.37□□□□□ -2.35
SMB1YER029C YOL118CQ08259 102 aa0.37□□□□□ -2.35
SMB1YER029C YCL048W-AQ2V2Q2 79 aa0.37□□□□□ -2.35
SMB1YER029C YCL001W-BQ96VH2 84 aa0.37□□□□□ -2.35
SMB1YER029C ROX3P25046 220 aa0.36□□□□□ -2.35
SMB1YER029C GCV3P39726 170 aaPredicted RBP0.36□□□□□ -2.35
SMB1YER029C PAU5P43575 122 aa0.36□□□□□ -2.35
SMB1YER029C MRX7P53869 86 aa0.36□□□□□ -2.35
SMB1YER029C YOR289WQ12012 251 aaPredicted RBP0.36□□□□□ -2.35
SMB1YER029C YDR029WQ12111 104 aa0.36□□□□□ -2.35
SMB1YER029C YCR095W-AQ3E787 52 aa0.36□□□□□ -2.35
SMB1YER029C YPL038W-AQ3E7B4 63 aa0.36□□□□□ -2.35
SMB1YER029C MHF2Q3E829 80 aa0.36□□□□□ -2.35
SMB1YER029C SUS1Q6WNK7 96 aa0.36□□□□□ -2.35
SMB1YER029C SEC7P11075 2009 aaKnown RBP0.36□□□□□ -2.35
SMB1YER029C BRR2P32639 2163 aaKnown RBP0.36□□□□□ -2.35
SMB1YER029C TY4B-HP0C2J7 1802 aa0.36□□□□□ -2.35
SMB1YER029C TY1B-BRQ12193 1756 aa0.35□□□□□ -2.35
SMB1YER029C SEC16P48415 2195 aaKnown RBP0.35□□□□□ -2.35
SMB1YER029C GDB1Q06625 1536 aa0.35□□□□□ -2.35
SMB1YER029C HMRA1P0CY11 126 aa0.35□□□□□ -2.35
SMB1YER029C MRP17P28778 131 aa0.35□□□□□ -2.35
SMB1YER029C YBL071CP38185 102 aa0.35□□□□□ -2.35
SMB1YER029C YJR128WP47162 119 aa0.35□□□□□ -2.35
SMB1YER029C MRPS12P53732 153 aa0.35□□□□□ -2.35
SMB1YER029C LCL1Q02786 101 aa0.35□□□□□ -2.35
SMB1YER029C PAU20Q08322 120 aa0.35□□□□□ -2.35
SMB1YER029C YOR034C-AQ3E735 80 aa0.35□□□□□ -2.35
SMB1YER029C RRT15Q3E811 62 aa0.35□□□□□ -2.35
SMB1YER029C YLR307C-AQ3E825 87 aa0.35□□□□□ -2.35
SMB1YER029C KSH1Q8TGJ3 72 aa0.35□□□□□ -2.35
SMB1YER029C SRB8P25648 1427 aa0.35□□□□□ -2.35
SMB1YER029C TY1B-DR6P0C2I3 1755 aa0.34□□□□□ -2.35
SMB1YER029C TY1B-LR2P0C2I5 1755 aa0.34□□□□□ -2.35
SMB1YER029C TY1B-PR3P0C2J1 1755 aaKnown RBP0.34□□□□□ -2.35
SMB1YER029C RIM15P43565 1770 aa0.34□□□□□ -2.35
SMB1YER029C TY1B-JR2P47100 1755 aaKnown RBP0.34□□□□□ -2.35
SMB1YER029C TY1B-MR1Q04214 1755 aa0.34□□□□□ -2.35
SMB1YER029C TY1B-MR2Q04670 1755 aaKnown RBP0.34□□□□□ -2.35
SMB1YER029C TY1B-NL1Q12112 1755 aa0.34□□□□□ -2.35
SMB1YER029C TY1B-GR1Q12141 1755 aa0.34□□□□□ -2.35
SMB1YER029C TY1B-GR3Q12316 1755 aa0.34□□□□□ -2.35
SMB1YER029C TY1B-PLQ12414 1755 aaKnown RBP0.34□□□□□ -2.35
SMB1YER029C TY1B-BLQ12490 1755 aa0.34□□□□□ -2.35
SMB1YER029C TY1B-ORQ92393 1755 aa0.34□□□□□ -2.35
SMB1YER029C YRF1-2P40105 1681 aa0.34□□□□□ -2.35
SMB1YER029C ECM12O13529 151 aa0.34□□□□□ -2.36
SMB1YER029C CCW14O13547 238 aa0.34□□□□□ -2.36
SMB1YER029C PAU1P0CE88 120 aa0.34□□□□□ -2.36
SMB1YER029C PAU14P0CE89 120 aa0.34□□□□□ -2.36
SMB1YER029C PAU6P0CE90 120 aa0.34□□□□□ -2.36
SMB1YER029C PAU18P0CE91 120 aa0.34□□□□□ -2.36
SMB1YER029C PAU8P0CE92 120 aa0.34□□□□□ -2.36
SMB1YER029C PAU11P0CE93 120 aa0.34□□□□□ -2.36
SMB1YER029C YLR157W-EP0CF00 54 aa0.34□□□□□ -2.36
SMB1YER029C PAU13P38725 120 aa0.34□□□□□ -2.36
SMB1YER029C SHU1P38751 150 aa0.34□□□□□ -2.36
SMB1YER029C YHL005CP38752 130 aa0.34□□□□□ -2.36
SMB1YER029C SSN2P38931 1420 aa0.34□□□□□ -2.36
SMB1YER029C SNU13P39990 126 aaKnown RBP0.34□□□□□ -2.36
SMB1YER029C RSM18P40033 138 aa0.34□□□□□ -2.36
SMB1YER029C YIL086CP40503 102 aa0.34□□□□□ -2.36
SMB1YER029C SPC1P46965 94 aa0.34□□□□□ -2.36
SMB1YER029C COX12Q01519 83 aa0.34□□□□□ -2.36
SMB1YER029C PAU10Q03050 120 aa0.34□□□□□ -2.36
SMB1YER029C NHP10Q03435 203 aa0.34□□□□□ -2.36
SMB1YER029C YGL194C-AQ2V2P6 80 aa0.34□□□□□ -2.36
SMB1YER029C PAU9Q3E770 120 aa0.34□□□□□ -2.36
SMB1YER029C YCR075W-AQ3E830 75 aa0.34□□□□□ -2.36
SMB1YER029C TY1B-PR2P0C2J0 1756 aa0.34□□□□□ -2.36
SMB1YER029C DNF3Q12674 1656 aa0.33□□□□□ -2.36
SMB1YER029C MOT1P32333 1867 aa0.33□□□□□ -2.36
SMB1YER029C ECM29P38737 1868 aa0.33□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 100.4 ms