RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C IMP2P46972 177 aa0.7□□□□□ -2.3
RPB5YBR154C FYV7Q12247 151 aa0.7□□□□□ -2.3
RPB5YBR154C KRE5P22023 1365 aa0.69□□□□□ -2.3
RPB5YBR154C CCW14O13547 238 aa0.68□□□□□ -2.3
RPB5YBR154C YPL038W-AQ3E7B4 63 aa0.68□□□□□ -2.3
RPB5YBR154C YLR255CO13574 117 aa0.67□□□□□ -2.3
RPB5YBR154C AUA1P32450 94 aa0.67□□□□□ -2.3
RPB5YBR154C YCR095W-AQ3E787 52 aa0.67□□□□□ -2.3
RPB5YBR154C URB1P34241 1764 aaKnown RBP0.67□□□□□ -2.3
RPB5YBR154C TY3B-IQ7LHG5 1498 aaKnown RBP0.67□□□□□ -2.3
RPB5YBR154C PDR11P40550 1411 aa0.66□□□□□ -2.3
RPB5YBR154C GEA1P47102 1408 aaPredicted RBP0.66□□□□□ -2.3
RPB5YBR154C YHR173CP38864 112 aa0.66□□□□□ -2.3
RPB5YBR154C GCV3P39726 170 aaPredicted RBP0.66□□□□□ -2.3
RPB5YBR154C YIL086CP40503 102 aa0.66□□□□□ -2.3
RPB5YBR154C SNA2P56508 79 aa0.66□□□□□ -2.3
RPB5YBR154C MIX14Q04341 121 aa0.66□□□□□ -2.3
RPB5YBR154C YBR072C-AQ3E794 53 aa0.66□□□□□ -2.3
RPB5YBR154C YRF1-6P53819 1859 aa0.66□□□□□ -2.3
RPB5YBR154C TOP2P06786 1428 aaKnown RBP0.65□□□□□ -2.3
RPB5YBR154C SEC16P48415 2195 aaKnown RBP0.65□□□□□ -2.31
RPB5YBR154C SHU1P38751 150 aa0.65□□□□□ -2.31
RPB5YBR154C PAU5P43575 122 aa0.65□□□□□ -2.31
RPB5YBR154C RSM19P53733 91 aaPredicted RBP0.65□□□□□ -2.31
RPB5YBR154C COX12Q01519 83 aa0.65□□□□□ -2.31
RPB5YBR154C YDR210WQ03482 75 aa0.65□□□□□ -2.31
RPB5YBR154C KSH1Q8TGJ3 72 aa0.65□□□□□ -2.31
RPB5YBR154C SEC7P11075 2009 aaKnown RBP0.64□□□□□ -2.31
RPB5YBR154C MPC2P38857 129 aa0.64□□□□□ -2.31
RPB5YBR154C ZEO1Q08245 113 aa0.64□□□□□ -2.31
RPB5YBR154C YPL225WQ08971 146 aaKnown RBP0.64□□□□□ -2.31
RPB5YBR154C YDR010CQ12426 110 aa0.64□□□□□ -2.31
RPB5YBR154C GEA2P39993 1459 aaKnown RBP0.64□□□□□ -2.31
RPB5YBR154C URA2P07259 2214 aaKnown RBP0.64□□□□□ -2.31
RPB5YBR154C BUD4P47136 1447 aa0.64□□□□□ -2.31
RPB5YBR154C ROX3P25046 220 aa0.63□□□□□ -2.31
RPB5YBR154C MRX7P53869 86 aa0.63□□□□□ -2.31
RPB5YBR154C COX19Q3E731 98 aa0.63□□□□□ -2.31
RPB5YBR154C REV3P14284 1504 aa0.63□□□□□ -2.31
RPB5YBR154C SRB8P25648 1427 aa0.63□□□□□ -2.31
RPB5YBR154C TY4B-HP0C2J7 1802 aa0.62□□□□□ -2.31
RPB5YBR154C PAU6P0CE90 120 aa0.62□□□□□ -2.31
RPB5YBR154C PAU18P0CE91 120 aa0.62□□□□□ -2.31
RPB5YBR154C HMRA1P0CY11 126 aa0.62□□□□□ -2.31
RPB5YBR154C MRP17P28778 131 aa0.62□□□□□ -2.31
RPB5YBR154C YOR289WQ12012 251 aaPredicted RBP0.62□□□□□ -2.31
RPB5YBR154C CAT8P39113 1433 aa0.62□□□□□ -2.31
RPB5YBR154C YHL005CP38752 130 aa0.61□□□□□ -2.31
RPB5YBR154C EMC5P40540 141 aa0.61□□□□□ -2.31
RPB5YBR154C YBL071CP38185 102 aa0.6□□□□□ -2.31
RPB5YBR154C ICY1Q04329 127 aa0.6□□□□□ -2.31
RPB5YBR154C PAU20Q08322 120 aa0.6□□□□□ -2.31
RPB5YBR154C YOL164W-AQ3E7A5 60 aa0.6□□□□□ -2.31
RPB5YBR154C YNR034W-AQ3E841 98 aa0.6□□□□□ -2.31
RPB5YBR154C RSF2P46974 1380 aa0.59□□□□□ -2.31
RPB5YBR154C BPT1P14772 1559 aa0.59□□□□□ -2.31
RPB5YBR154C MRPL38P35996 138 aaPredicted RBP0.59□□□□□ -2.31
RPB5YBR154C RRT15Q3E811 62 aa0.59□□□□□ -2.31
RPB5YBR154C PRP8P33334 2413 aaKnown RBP0.59□□□□□ -2.32
RPB5YBR154C SSN2P38931 1420 aa0.58□□□□□ -2.32
RPB5YBR154C PAU1P0CE88 120 aa0.58□□□□□ -2.32
RPB5YBR154C PAU14P0CE89 120 aa0.58□□□□□ -2.32
RPB5YBR154C PAU8P0CE92 120 aa0.58□□□□□ -2.32
RPB5YBR154C PAU11P0CE93 120 aa0.58□□□□□ -2.32
RPB5YBR154C RPS11AP0CX47 156 aaKnown RBP0.58□□□□□ -2.32
RPB5YBR154C RPS11BP0CX48 156 aaKnown RBP0.58□□□□□ -2.32
RPB5YBR154C YBR292CP38357 123 aa0.58□□□□□ -2.32
RPB5YBR154C PAU13P38725 120 aa0.58□□□□□ -2.32
RPB5YBR154C AIM19P40502 157 aa0.58□□□□□ -2.32
RPB5YBR154C MSL1P40567 111 aaPredicted RBP0.58□□□□□ -2.32
RPB5YBR154C SPC1P46965 94 aa0.58□□□□□ -2.32
RPB5YBR154C PAU10Q03050 120 aa0.58□□□□□ -2.32
RPB5YBR154C NHP10Q03435 203 aa0.58□□□□□ -2.32
RPB5YBR154C PAU9Q3E770 120 aa0.58□□□□□ -2.32
RPB5YBR154C SNF2P22082 1703 aa0.58□□□□□ -2.32
RPB5YBR154C NTE1Q04958 1679 aa0.56□□□□□ -2.32
RPB5YBR154C BNI1P41832 1953 aa0.56□□□□□ -2.32
RPB5YBR154C RPA12P32529 125 aaKnown RBP0.56□□□□□ -2.32
RPB5YBR154C SNU13P39990 126 aaKnown RBP0.56□□□□□ -2.32
RPB5YBR154C RPS29BP41058 56 aaKnown RBP0.56□□□□□ -2.32
RPB5YBR154C PAU4P53427 120 aa0.56□□□□□ -2.32
RPB5YBR154C BRR2P32639 2163 aaKnown RBP0.56□□□□□ -2.32
RPB5YBR154C RSM18P40033 138 aa0.55□□□□□ -2.32
RPB5YBR154C YDR029WQ12111 104 aa0.55□□□□□ -2.32
RPB5YBR154C SUS1Q6WNK7 96 aa0.55□□□□□ -2.32
RPB5YBR154C MYO1P08964 1928 aa0.55□□□□□ -2.32
RPB5YBR154C YRF1-1P0CX20 1796 aa0.54□□□□□ -2.32
RPB5YBR154C YRF1-5P0CX21 1796 aa0.54□□□□□ -2.32
RPB5YBR154C YRF1-8P0CX22 1796 aa0.54□□□□□ -2.32
RPB5YBR154C YDR042CQ03205 200 aa0.53□□□□□ -2.32
RPB5YBR154C MHF2Q3E829 80 aa0.53□□□□□ -2.32
RPB5YBR154C BLM10P43583 2143 aa0.53□□□□□ -2.32
RPB5YBR154C POL2P21951 2222 aaKnown RBP0.53□□□□□ -2.33
RPB5YBR154C RPA190P10964 1664 aaKnown RBP0.53□□□□□ -2.33
RPB5YBR154C RPC10P40422 70 aa0.52□□□□□ -2.33
RPB5YBR154C YCL001W-BQ96VH2 84 aa0.52□□□□□ -2.33
RPB5YBR154C YNL190WP53872 204 aa0.51□□□□□ -2.33
RPB5YBR154C YCR075W-AQ3E830 75 aa0.51□□□□□ -2.33
RPB5YBR154C FAS2P19097 1887 aaKnown RBP0.5□□□□□ -2.33
RPB5YBR154C RIM15P43565 1770 aa0.5□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms