RNA–Protein interactions for RNA: YBR009C

HHF1, Transcript of Histone H4, yeastyeast

Gene HHF1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HHF1YBR009C ROX3P25046 220 aa1.86□□□□□ -2.11
HHF1YBR009C RSM18P40033 138 aa1.86□□□□□ -2.11
HHF1YBR009C LSM6Q06406 86 aaKnown RBP1.86□□□□□ -2.11
HHF1YBR009C GDB1Q06625 1536 aa1.86□□□□□ -2.11
HHF1YBR009C SEC7P11075 2009 aaKnown RBP1.85□□□□□ -2.11
HHF1YBR009C YHL037CP38733 133 aa1.85□□□□□ -2.11
HHF1YBR009C CWP2P43497 92 aa1.85□□□□□ -2.11
HHF1YBR009C IMP2P46972 177 aa1.85□□□□□ -2.11
HHF1YBR009C ICY1Q04329 127 aa1.85□□□□□ -2.11
HHF1YBR009C CCW12Q12127 133 aa1.85□□□□□ -2.11
HHF1YBR009C YCL048W-AQ2V2Q2 79 aa1.85□□□□□ -2.11
HHF1YBR009C YMR175W-AQ3E766 64 aa1.85□□□□□ -2.11
HHF1YBR009C YRF1-2P40105 1681 aa1.85□□□□□ -2.11
HHF1YBR009C VPS55P47111 140 aa1.84□□□□□ -2.11
HHF1YBR009C IRC21Q04772 201 aa1.84□□□□□ -2.11
HHF1YBR009C YCR095W-AQ3E787 52 aa1.84□□□□□ -2.11
HHF1YBR009C ENV10Q99382 181 aa1.84□□□□□ -2.11
HHF1YBR009C LAA1P39526 2014 aa1.84□□□□□ -2.12
HHF1YBR009C TY1B-NL2Q99337 1749 aaKnown RBP1.83□□□□□ -2.12
HHF1YBR009C TY4B-JP47024 1803 aa1.83□□□□□ -2.12
HHF1YBR009C YHR212W-AP0CX91 67 aa1.83□□□□□ -2.12
HHF1YBR009C POL1P13382 1468 aa1.82□□□□□ -2.12
HHF1YBR009C SLH1P53327 1967 aaKnown RBP1.82□□□□□ -2.12
HHF1YBR009C AQY2P0CD90 149 aa1.82□□□□□ -2.12
HHF1YBR009C YOL118CQ08259 102 aa1.82□□□□□ -2.12
HHF1YBR009C POC4Q12245 148 aaPredicted RBP1.82□□□□□ -2.12
HHF1YBR009C CCW14O13547 238 aa1.81□□□□□ -2.12
HHF1YBR009C YCR085WP25650 117 aa1.81□□□□□ -2.12
HHF1YBR009C YBR013CP38215 129 aa1.81□□□□□ -2.12
HHF1YBR009C MIC27P50945 234 aa1.81□□□□□ -2.12
HHF1YBR009C MRPS12P53732 153 aa1.81□□□□□ -2.12
HHF1YBR009C YNL122CP53921 115 aaPredicted RBP1.81□□□□□ -2.12
HHF1YBR009C YGL041C-BQ3E750 60 aa1.81□□□□□ -2.12
HHF1YBR009C RPS22BQ3E7Y3 130 aaKnown RBP1.81□□□□□ -2.12
HHF1YBR009C ESP1Q03018 1630 aa1.8□□□□□ -2.12
HHF1YBR009C ICS3P47034 131 aa1.8□□□□□ -2.12
HHF1YBR009C LCL2Q08045 131 aa1.8□□□□□ -2.12
HHF1YBR009C ACC1Q00955 2233 aaKnown RBP1.8□□□□□ -2.12
HHF1YBR009C RPA12P32529 125 aaKnown RBP1.79□□□□□ -2.12
HHF1YBR009C MRPL38P35996 138 aaPredicted RBP1.79□□□□□ -2.12
HHF1YBR009C YJL009WP47078 108 aa1.79□□□□□ -2.12
HHF1YBR009C SNA2P56508 79 aa1.79□□□□□ -2.12
HHF1YBR009C YDR210WQ03482 75 aa1.79□□□□□ -2.12
HHF1YBR009C YGR240C-AQ3E786 66 aa1.79□□□□□ -2.12
HHF1YBR009C PAU6P0CE90 120 aa1.78□□□□□ -2.12
HHF1YBR009C PAU18P0CE91 120 aa1.78□□□□□ -2.12
HHF1YBR009C SPC1P46965 94 aa1.78□□□□□ -2.12
HHF1YBR009C MRP17P28778 131 aa1.77□□□□□ -2.13
HHF1YBR009C NHP2P32495 156 aaPredicted RBP1.77□□□□□ -2.13
HHF1YBR009C YBL071CP38185 102 aa1.77□□□□□ -2.13
HHF1YBR009C MHF2Q3E829 80 aa1.77□□□□□ -2.13
HHF1YBR009C MLP1Q02455 1875 aaKnown RBP1.77□□□□□ -2.13
HHF1YBR009C YAR064WP39563 99 aa1.76□□□□□ -2.13
HHF1YBR009C SRB8P25648 1427 aa1.75□□□□□ -2.13
HHF1YBR009C URB1P34241 1764 aaKnown RBP1.75□□□□□ -2.13
HHF1YBR009C TY1B-DR1Q03855 1755 aa1.75□□□□□ -2.13
HHF1YBR009C TY1B-DR3Q99231 1755 aa1.75□□□□□ -2.13
HHF1YBR009C NTE1Q04958 1679 aa1.75□□□□□ -2.13
HHF1YBR009C YPL038W-AQ3E7B4 63 aa1.75□□□□□ -2.13
HHF1YBR009C YHR213W-AQ8TGT4 77 aa1.75□□□□□ -2.13
HHF1YBR009C YOL013W-AP0C272 63 aaPredicted RBP1.74□□□□□ -2.13
HHF1YBR009C MRPL31P14063 131 aaPredicted RBP1.74□□□□□ -2.13
HHF1YBR009C YCR001WP25347 104 aa1.74□□□□□ -2.13
HHF1YBR009C TOM6P33448 61 aa1.74□□□□□ -2.13
HHF1YBR009C LSM2P38203 95 aaKnown RBP1.74□□□□□ -2.13
HHF1YBR009C YRF1-1P0CX20 1796 aa1.74□□□□□ -2.13
HHF1YBR009C YRF1-5P0CX21 1796 aa1.74□□□□□ -2.13
HHF1YBR009C YRF1-8P0CX22 1796 aa1.74□□□□□ -2.13
HHF1YBR009C MRX7P53869 86 aa1.73□□□□□ -2.13
HHF1YBR009C MGR2Q02889 113 aa1.73□□□□□ -2.13
HHF1YBR009C YOR072WQ08486 104 aa1.73□□□□□ -2.13
HHF1YBR009C NUP159P40477 1460 aa1.73□□□□□ -2.13
HHF1YBR009C YLR255CO13574 117 aa1.72□□□□□ -2.13
HHF1YBR009C COX12Q01519 83 aa1.72□□□□□ -2.13
HHF1YBR009C YNR034W-AQ3E841 98 aa1.72□□□□□ -2.13
HHF1YBR009C LCL1Q02786 101 aa1.71□□□□□ -2.14
HHF1YBR009C YOR343CQ12484 108 aa1.71□□□□□ -2.14
HHF1YBR009C YPR145C-AQ2V2P0 78 aa1.71□□□□□ -2.14
HHF1YBR009C XRN1P22147 1528 aaKnown RBP1.71□□□□□ -2.14
HHF1YBR009C MMS22Q06164 1454 aa1.7□□□□□ -2.14
HHF1YBR009C AIM19P40502 157 aa1.7□□□□□ -2.14
HHF1YBR009C YDR119W-AQ2V2P9 66 aa1.7□□□□□ -2.14
HHF1YBR009C PAU1P0CE88 120 aa1.69□□□□□ -2.14
HHF1YBR009C PAU14P0CE89 120 aa1.69□□□□□ -2.14
HHF1YBR009C PAU8P0CE92 120 aa1.69□□□□□ -2.14
HHF1YBR009C PAU11P0CE93 120 aa1.69□□□□□ -2.14
HHF1YBR009C RPS11AP0CX47 156 aaKnown RBP1.69□□□□□ -2.14
HHF1YBR009C RPS11BP0CX48 156 aaKnown RBP1.69□□□□□ -2.14
HHF1YBR009C YHR214C-DP0CX93 97 aa1.69□□□□□ -2.14
HHF1YBR009C PAU13P38725 120 aa1.69□□□□□ -2.14
HHF1YBR009C PAU10Q03050 120 aa1.69□□□□□ -2.14
HHF1YBR009C YDR381C-AQ3E6R5 114 aa1.69□□□□□ -2.14
HHF1YBR009C PAU9Q3E770 120 aa1.69□□□□□ -2.14
HHF1YBR009C HUG1Q6Q5K6 68 aa1.69□□□□□ -2.14
HHF1YBR009C SIN3P22579 1536 aa1.69□□□□□ -2.14
HHF1YBR009C DOP1Q03921 1698 aa1.68□□□□□ -2.14
HHF1YBR009C MVB12P42939 101 aa1.68□□□□□ -2.14
HHF1YBR009C PAU4P53427 120 aa1.68□□□□□ -2.14
HHF1YBR009C YIL102CP40488 101 aa1.67□□□□□ -2.14
HHF1YBR009C BSC4P53841 131 aa1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 81.5 ms