RNA–Protein interactions for RNA: Q0060

AI3, Transcript of Endonuclease I-SceIII, yeast

Gene AI3, Length 1,248 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AI3	Q0060	YBR072C-A	Q3E794	53 aa		0.86	□□□□□ -2.27
AI3	Q0060	YOS1	Q3E834	85 aa		0.86	□□□□□ -2.27
AI3	Q0060	SEC7	P11075	2009 aa	Known RBP	0.86	□□□□□ -2.27
AI3	Q0060	URB1	P34241	1764 aa	Known RBP	0.85	□□□□□ -2.27
AI3	Q0060	YCR101C	P25607	182 aa		0.85	□□□□□ -2.27
AI3	Q0060	SHU1	P38751	150 aa		0.85	□□□□□ -2.27
AI3	Q0060	YIL086C	P40503	102 aa		0.85	□□□□□ -2.27
AI3	Q0060	YLR419W	Q06698	1435 aa	Known RBP	0.85	□□□□□ -2.27
AI3	Q0060	YOL164W-A	Q3E7A5	60 aa		0.85	□□□□□ -2.27
AI3	Q0060	KRE5	P22023	1365 aa		0.84	□□□□□ -2.27
AI3	Q0060	YMR090W	Q04304	227 aa	Known RBP	0.84	□□□□□ -2.27
AI3	Q0060	YCR095W-A	Q3E787	52 aa		0.84	□□□□□ -2.27
AI3	Q0060	YRF1-6	P53819	1859 aa		0.84	□□□□□ -2.28
AI3	Q0060	BLM10	P43583	2143 aa		0.83	□□□□□ -2.28
AI3	Q0060	TOP2	P06786	1428 aa	Known RBP	0.83	□□□□□ -2.28
AI3	Q0060	CCW14	O13547	238 aa		0.83	□□□□□ -2.28
AI3	Q0060	RGI1	P40043	161 aa	Predicted RBP	0.83	□□□□□ -2.28
AI3	Q0060	SNF2	P22082	1703 aa		0.83	□□□□□ -2.28
AI3	Q0060	BRR2	P32639	2163 aa	Known RBP	0.83	□□□□□ -2.28
AI3	Q0060	SNA2	P56508	79 aa		0.82	□□□□□ -2.28
AI3	Q0060	UBC4	P15731	148 aa		0.81	□□□□□ -2.28
AI3	Q0060	BNI1	P41832	1953 aa		0.81	□□□□□ -2.28
AI3	Q0060	TSC11	P40061	1430 aa		0.81	□□□□□ -2.28
AI3	Q0060	RPA12	P32529	125 aa	Known RBP	0.8	□□□□□ -2.28
AI3	Q0060	MPC2	P38857	129 aa		0.8	□□□□□ -2.28
AI3	Q0060	PAU5	P43575	122 aa		0.8	□□□□□ -2.28
AI3	Q0060	YDR210W	Q03482	75 aa		0.8	□□□□□ -2.28
AI3	Q0060	TY4B-H	P0C2J7	1802 aa		0.8	□□□□□ -2.28
AI3	Q0060	YBR090C	P38253	122 aa		0.79	□□□□□ -2.28
AI3	Q0060	RSM19	P53733	91 aa	Predicted RBP	0.79	□□□□□ -2.28
AI3	Q0060	MRX7	P53869	86 aa		0.79	□□□□□ -2.28
AI3	Q0060	COX12	Q01519	83 aa		0.79	□□□□□ -2.28
AI3	Q0060	MDS3	P53094	1487 aa		0.79	□□□□□ -2.28
AI3	Q0060	PAU6	P0CE90	120 aa		0.78	□□□□□ -2.28
AI3	Q0060	PAU18	P0CE91	120 aa		0.78	□□□□□ -2.28
AI3	Q0060	FYV7	Q12247	151 aa		0.78	□□□□□ -2.28
AI3	Q0060	UBC5	P15732	148 aa		0.77	□□□□□ -2.29
AI3	Q0060	RPS29B	P41058	56 aa	Known RBP	0.77	□□□□□ -2.29
AI3	Q0060	COX19	Q3E731	98 aa		0.76	□□□□□ -2.29
AI3	Q0060	SRB8	P25648	1427 aa		0.75	□□□□□ -2.29
AI3	Q0060	PDR11	P40550	1411 aa		0.75	□□□□□ -2.29
AI3	Q0060	ROX3	P25046	220 aa		0.75	□□□□□ -2.29
AI3	Q0060	YBL071C	P38185	102 aa		0.75	□□□□□ -2.29
AI3	Q0060	ICY1	Q04329	127 aa		0.75	□□□□□ -2.29
AI3	Q0060	PAU20	Q08322	120 aa		0.75	□□□□□ -2.29
AI3	Q0060	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.74	□□□□□ -2.29
AI3	Q0060	RPS11A	P0CX47	156 aa	Known RBP	0.74	□□□□□ -2.29
AI3	Q0060	RPS11B	P0CX48	156 aa	Known RBP	0.74	□□□□□ -2.29
AI3	Q0060	MRP17	P28778	131 aa		0.74	□□□□□ -2.29
AI3	Q0060	MIX14	Q04341	121 aa		0.74	□□□□□ -2.29
AI3	Q0060	YNR034W-A	Q3E841	98 aa		0.73	□□□□□ -2.29
AI3	Q0060	POL2	P21951	2222 aa	Known RBP	0.72	□□□□□ -2.29
AI3	Q0060	YOR289W	Q12012	251 aa	Predicted RBP	0.72	□□□□□ -2.29
AI3	Q0060	KSH1	Q8TGJ3	72 aa		0.72	□□□□□ -2.29
AI3	Q0060	GEA1	P47102	1408 aa	Predicted RBP	0.72	□□□□□ -2.29
AI3	Q0060	PAU1	P0CE88	120 aa		0.71	□□□□□ -2.3
AI3	Q0060	PAU14	P0CE89	120 aa		0.71	□□□□□ -2.3
AI3	Q0060	PAU8	P0CE92	120 aa		0.71	□□□□□ -2.3
AI3	Q0060	PAU11	P0CE93	120 aa		0.71	□□□□□ -2.3
AI3	Q0060	MRPL38	P35996	138 aa	Predicted RBP	0.71	□□□□□ -2.3
AI3	Q0060	PAU13	P38725	120 aa		0.71	□□□□□ -2.3
AI3	Q0060	PAU10	Q03050	120 aa		0.71	□□□□□ -2.3
AI3	Q0060	PAU9	Q3E770	120 aa		0.71	□□□□□ -2.3
AI3	Q0060	SSN2	P38931	1420 aa		0.71	□□□□□ -2.3
AI3	Q0060	HMRA1	P0CY11	126 aa		0.7	□□□□□ -2.3
AI3	Q0060	YBR292C	P38357	123 aa		0.69	□□□□□ -2.3
AI3	Q0060	EMC5	P40540	141 aa		0.69	□□□□□ -2.3
AI3	Q0060	NHP10	Q03435	203 aa		0.69	□□□□□ -2.3
AI3	Q0060	FAS2	P19097	1887 aa	Known RBP	0.69	□□□□□ -2.3
AI3	Q0060	GEA2	P39993	1459 aa	Known RBP	0.68	□□□□□ -2.3
AI3	Q0060	AIM19	P40502	157 aa		0.68	□□□□□ -2.3
AI3	Q0060	SPC1	P46965	94 aa		0.68	□□□□□ -2.3
AI3	Q0060	BUD4	P47136	1447 aa		0.68	□□□□□ -2.3
AI3	Q0060	MYO1	P08964	1928 aa		0.68	□□□□□ -2.3
AI3	Q0060	YHL005C	P38752	130 aa		0.67	□□□□□ -2.3
AI3	Q0060	PAU4	P53427	120 aa		0.67	□□□□□ -2.3
AI3	Q0060	YNL190W	P53872	204 aa		0.67	□□□□□ -2.3
AI3	Q0060	REV3	P14284	1504 aa		0.67	□□□□□ -2.3
AI3	Q0060	RSM18	P40033	138 aa		0.66	□□□□□ -2.3
AI3	Q0060	ZEO1	Q08245	113 aa		0.66	□□□□□ -2.3
AI3	Q0060	RRT15	Q3E811	62 aa		0.66	□□□□□ -2.3
AI3	Q0060	RPC10	P40422	70 aa		0.65	□□□□□ -2.31
AI3	Q0060	CAT8	P39113	1433 aa		0.64	□□□□□ -2.31
AI3	Q0060	YNL198C	P40166	100 aa		0.64	□□□□□ -2.31
AI3	Q0060	YPL225W	Q08971	146 aa	Known RBP	0.64	□□□□□ -2.31
AI3	Q0060	RSF2	P46974	1380 aa		0.64	□□□□□ -2.31
AI3	Q0060	MSL1	P40567	111 aa	Predicted RBP	0.63	□□□□□ -2.31
AI3	Q0060	BPT1	P14772	1559 aa		0.62	□□□□□ -2.31
AI3	Q0060	SNU13	P39990	126 aa	Known RBP	0.62	□□□□□ -2.31
AI3	Q0060	YRF1-1	P0CX20	1796 aa		0.62	□□□□□ -2.31
AI3	Q0060	YRF1-5	P0CX21	1796 aa		0.62	□□□□□ -2.31
AI3	Q0060	YRF1-8	P0CX22	1796 aa		0.62	□□□□□ -2.31
AI3	Q0060	NTE1	Q04958	1679 aa		0.62	□□□□□ -2.31
AI3	Q0060	YJR107C-A	P0CT86	78 aa		0.6	□□□□□ -2.31
AI3	Q0060	RIM15	P43565	1770 aa		0.6	□□□□□ -2.31
AI3	Q0060	SUS1	Q6WNK7	96 aa		0.59	□□□□□ -2.31
AI3	Q0060	TAO3	P40468	2376 aa		0.59	□□□□□ -2.32
AI3	Q0060	MHF2	Q3E829	80 aa		0.58	□□□□□ -2.32
AI3	Q0060	RPL38	P49167	78 aa	Known RBP	0.57	□□□□□ -2.32
AI3	Q0060	YDR029W	Q12111	104 aa		0.57	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms