RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C KTI11Q3E840 82 aa-0.2□□□□□ -2.44
NIP100YPL174C YFR035CP43608 114 aa-0.21□□□□□ -2.44
NIP100YPL174C SPT6P23615 1451 aaKnown RBP-0.21□□□□□ -2.44
NIP100YPL174C YMR321CQ04898 105 aa-0.21□□□□□ -2.44
NIP100YPL174C RAD51P25454 400 aa-0.22□□□□□ -2.44
NIP100YPL174C TOM1Q03280 3268 aa-0.22□□□□□ -2.45
NIP100YPL174C ANB1P19211 157 aa-0.22□□□□□ -2.45
NIP100YPL174C FES1P38260 290 aa-0.22□□□□□ -2.45
NIP100YPL174C YMR122CQ03879 124 aa-0.22□□□□□ -2.45
NIP100YPL174C ECM29P38737 1868 aa-0.23□□□□□ -2.45
NIP100YPL174C ATG8P38182 117 aaRIP-Chip data-0.23□□□□□ -2.45not detected
NIP100YPL174C YGL101WP53144 215 aa-0.23□□□□□ -2.45
NIP100YPL174C HUG1Q6Q5K6 68 aa-0.23□□□□□ -2.45
NIP100YPL174C CDC39P25655 2108 aaKnown RBP-0.23□□□□□ -2.45
NIP100YPL174C IPI1P38803 334 aaPredicted RBP-0.23□□□□□ -2.45
NIP100YPL174C LST8P41318 303 aa-0.23□□□□□ -2.45
NIP100YPL174C YIP3P53633 176 aa-0.23□□□□□ -2.45
NIP100YPL174C LSM3P57743 89 aaKnown RBP-0.23□□□□□ -2.45
NIP100YPL174C RFU1Q08003 200 aa-0.23□□□□□ -2.45
NIP100YPL174C HKR1P41809 1802 aa-0.23□□□□□ -2.45
NIP100YPL174C YGL014C-AP0C5N1 53 aa-0.24□□□□□ -2.45
NIP100YPL174C MVB12P42939 101 aa-0.24□□□□□ -2.45
NIP100YPL174C PHO13P19881 312 aa-0.24□□□□□ -2.45
NIP100YPL174C DDR48P18899 430 aaKnown RBP-0.25□□□□□ -2.45
NIP100YPL174C HSK3P69852 69 aa-0.25□□□□□ -2.45
NIP100YPL174C YDR102CQ03864 110 aa-0.25□□□□□ -2.45
NIP100YPL174C SAC3P46674 1301 aa-0.26□□□□□ -2.45
NIP100YPL174C STT4P37297 1900 aa-0.26□□□□□ -2.45
NIP100YPL174C RPL30P14120 105 aaKnown RBP-0.26□□□□□ -2.45
NIP100YPL174C ROX3P25046 220 aa-0.26□□□□□ -2.45
NIP100YPL174C FIG1P38224 298 aa-0.26□□□□□ -2.45
NIP100YPL174C YNL019CP53975 284 aa-0.26□□□□□ -2.45
NIP100YPL174C YPD1Q07688 167 aa-0.26□□□□□ -2.45
NIP100YPL174C UBR1P19812 1950 aa-0.26□□□□□ -2.45
NIP100YPL174C JIP3O13555 125 aa-0.27□□□□□ -2.45
NIP100YPL174C PFY1P07274 126 aa-0.27□□□□□ -2.45
NIP100YPL174C FUN14P18411 198 aa-0.27□□□□□ -2.45
NIP100YPL174C RIB3Q99258 208 aa-0.27□□□□□ -2.45
NIP100YPL174C PBI2P0CT04 75 aaKnown RBP-0.27□□□□□ -2.45
NIP100YPL174C DLS1P40366 167 aa-0.27□□□□□ -2.45
NIP100YPL174C MRS4P23500 304 aa-0.28□□□□□ -2.45
NIP100YPL174C BUB2P26448 306 aaPredicted RBP-0.28□□□□□ -2.45
NIP100YPL174C SRP21P32342 167 aa-0.28□□□□□ -2.45
NIP100YPL174C EGD2P38879 174 aaKnown RBP-0.28□□□□□ -2.45
NIP100YPL174C COA4Q05809 96 aa-0.28□□□□□ -2.45
NIP100YPL174C YHR213WP0CI67 198 aa-0.28□□□□□ -2.45
NIP100YPL174C VPS51P36116 164 aa-0.28□□□□□ -2.45
NIP100YPL174C ORM1P53224 222 aa-0.28□□□□□ -2.45
NIP100YPL174C RAF1Q06891 181 aa-0.29□□□□□ -2.46
NIP100YPL174C MHF1Q3E835 90 aa-0.29□□□□□ -2.46
NIP100YPL174C Q0017Q9ZZX8 53 aa-0.29□□□□□ -2.46
NIP100YPL174C TRA1P38811 3744 aa-0.29□□□□□ -2.46
NIP100YPL174C MYO1P08964 1928 aa-0.29□□□□□ -2.46
NIP100YPL174C BPH1P25356 2167 aa-0.29□□□□□ -2.46
NIP100YPL174C FIP1P45976 327 aa-0.29□□□□□ -2.46
NIP100YPL174C YLR053CQ12026 108 aa-0.29□□□□□ -2.46
NIP100YPL174C RPS28BP0C0X0 67 aaKnown RBP-0.3□□□□□ -2.46
NIP100YPL174C NMT1P14743 455 aa-0.3□□□□□ -2.46
NIP100YPL174C VMA10P48836 114 aaKnown RBP-0.3□□□□□ -2.46
NIP100YPL174C YGR017WP53210 297 aa-0.3□□□□□ -2.46
NIP100YPL174C RPS28AQ3E7X9 67 aaPredicted RBP-0.3□□□□□ -2.46
NIP100YPL174C UBI4P0CG63 381 aaKnown RBP-0.31□□□□□ -2.46
NIP100YPL174C MRPL24P36525 258 aaPredicted RBP-0.31□□□□□ -2.46
NIP100YPL174C APQ12P40532 138 aa-0.31□□□□□ -2.46
NIP100YPL174C DIE2P50076 525 aa-0.31□□□□□ -2.46
NIP100YPL174C EMC4P53073 190 aa-0.31□□□□□ -2.46
NIP100YPL174C DDP1Q99321 188 aaKnown RBP-0.31□□□□□ -2.46
NIP100YPL174C MOT1P32333 1867 aa-0.31□□□□□ -2.46
NIP100YPL174C RPO41P13433 1351 aaKnown RBP-0.31□□□□□ -2.46
NIP100YPL174C MRPL31P14063 131 aaPredicted RBP-0.31□□□□□ -2.46
NIP100YPL174C YLR194CQ05777 254 aa-0.31□□□□□ -2.46
NIP100YPL174C YPR202WQ08993 238 aa-0.32□□□□□ -2.46
NIP100YPL174C YJL218WP40892 196 aaKnown RBP-0.32□□□□□ -2.46
NIP100YPL174C YDR010CQ12426 110 aa-0.32□□□□□ -2.46
NIP100YPL174C SCS22Q6Q595 175 aa-0.32□□□□□ -2.46
NIP100YPL174C COX5BP00425 151 aa-0.33□□□□□ -2.46
NIP100YPL174C QCR2P07257 368 aa-0.33□□□□□ -2.46
NIP100YPL174C YBR013CP38215 129 aa-0.33□□□□□ -2.46
NIP100YPL174C YER121WP40076 114 aa-0.33□□□□□ -2.46
NIP100YPL174C YER181CP40097 107 aa-0.33□□□□□ -2.46
NIP100YPL174C RDI1Q12434 202 aa-0.33□□□□□ -2.46
NIP100YPL174C SOM1Q05676 74 aa-0.33□□□□□ -2.46
NIP100YPL174C ATG38Q05789 226 aaKnown RBP-0.33□□□□□ -2.46
NIP100YPL174C YJR128WP47162 119 aa-0.34□□□□□ -2.46
NIP100YPL174C NAT5Q08689 176 aa-0.34□□□□□ -2.46
NIP100YPL174C ATP14Q12349 124 aa-0.34□□□□□ -2.46
NIP100YPL174C FYV5P25585 152 aa-0.34□□□□□ -2.46
NIP100YPL174C YGR035W-AQ45U48 73 aa-0.34□□□□□ -2.46
NIP100YPL174C RPS1BP23248 255 aaKnown RBP-0.34□□□□□ -2.46
NIP100YPL174C SFT2P38166 215 aa-0.34□□□□□ -2.46
NIP100YPL174C BRP1P53194 125 aa-0.34□□□□□ -2.46
NIP100YPL174C MRPL44P19956 98 aa-0.35□□□□□ -2.47
NIP100YPL174C SPG1P50088 95 aa-0.35□□□□□ -2.47
NIP100YPL174C MIC27P50945 234 aa-0.35□□□□□ -2.47
NIP100YPL174C YLR296WQ05898 108 aa-0.35□□□□□ -2.47
NIP100YPL174C AUA1P32450 94 aa-0.35□□□□□ -2.47
NIP100YPL174C GAT4P40569 121 aa-0.36□□□□□ -2.47
NIP100YPL174C LSM1P47017 172 aaKnown RBP-0.36□□□□□ -2.47
NIP100YPL174C ICS3P47034 131 aa-0.36□□□□□ -2.47
NIP100YPL174C GIM5Q04493 163 aa-0.36□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms