RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C Q0255P03881 472 aa7.72□□□□□ -1.17
SSN3YPL042C MRS4P23500 304 aa7.72□□□□□ -1.17
SSN3YPL042C MRPL11P36521 249 aaPredicted RBP7.72□□□□□ -1.17
SSN3YPL042C PEX17P40155 199 aa7.72□□□□□ -1.17
SSN3YPL042C MSL1P40567 111 aaPredicted RBP7.72□□□□□ -1.17
SSN3YPL042C YGL034CP53186 121 aa7.72□□□□□ -1.17
SSN3YPL042C EST3Q03096 181 aa7.72□□□□□ -1.17
SSN3YPL042C VMA9Q3E7B6 73 aa7.72□□□□□ -1.17
SSN3YPL042C RPL43AP0CX25 92 aaKnown RBP7.71□□□□□ -1.18
SSN3YPL042C RPL43BP0CX26 92 aa7.71□□□□□ -1.18
SSN3YPL042C YRA2P36036 203 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
SSN3YPL042C PIR5P46999 287 aa7.71□□□□□ -1.18
SSN3YPL042C TDA4P47153 279 aa7.71□□□□□ -1.18
SSN3YPL042C RPL21AQ02753 160 aaKnown RBP7.71□□□□□ -1.18
SSN3YPL042C YMR090WQ04304 227 aaKnown RBP7.71□□□□□ -1.18
SSN3YPL042C TIM18Q08749 192 aa7.71□□□□□ -1.18
SSN3YPL042C RPL21BQ12672 160 aaKnown RBP7.71□□□□□ -1.18
SSN3YPL042C YMR105W-AQ8TGS8 64 aa7.71□□□□□ -1.18
SSN3YPL042C CTR2P38865 189 aa7.7□□□□□ -1.18
SSN3YPL042C YGR018CP53211 109 aa7.7□□□□□ -1.18
SSN3YPL042C MRP10O75012 95 aa7.69□□□□□ -1.18
SSN3YPL042C NNK1P36003 928 aa7.69□□□□□ -1.18
SSN3YPL042C PHS1P40857 217 aa7.69□□□□□ -1.18
SSN3YPL042C YGL262WP53054 175 aa7.69□□□□□ -1.18
SSN3YPL042C ROX3P25046 220 aa7.67□□□□□ -1.18
SSN3YPL042C AHT1P29589 182 aa7.67□□□□□ -1.18
SSN3YPL042C CYB5P40312 120 aa7.67□□□□□ -1.18
SSN3YPL042C MSA1Q08471 629 aa7.67□□□□□ -1.18
SSN3YPL042C COA2Q3E823 68 aa7.67□□□□□ -1.18
SSN3YPL042C TRP1P00912 224 aa7.67□□□□□ -1.18
SSN3YPL042C YGL010WP25338 174 aa7.67□□□□□ -1.18
SSN3YPL042C YNR064CP53750 290 aa7.67□□□□□ -1.18
SSN3YPL042C YDL242WQ07746 117 aa7.67□□□□□ -1.18
SSN3YPL042C YCL048W-AQ2V2Q2 79 aa7.67□□□□□ -1.18
SSN3YPL042C HTL1Q9URQ5 78 aa7.67□□□□□ -1.18
SSN3YPL042C YHR138CP38841 114 aaPredicted RBP7.66□□□□□ -1.18
SSN3YPL042C SMD1Q02260 146 aaPredicted RBP7.66□□□□□ -1.18
SSN3YPL042C LPP1Q04396 274 aa7.66□□□□□ -1.18
SSN3YPL042C TMC1Q08422 150 aaPredicted RBP7.66□□□□□ -1.18
SSN3YPL042C VMA21P41806 77 aa7.65□□□□□ -1.18
SSN3YPL042C YFL015CP43578 164 aa7.65□□□□□ -1.18
SSN3YPL042C YGL193CP53097 103 aa7.65□□□□□ -1.18
SSN3YPL042C YNL234WP53857 426 aa7.65□□□□□ -1.18
SSN3YPL042C POR1P04840 283 aaKnown RBP7.64□□□□□ -1.19
SSN3YPL042C RPS25BP0C0T4 108 aaKnown RBP7.64□□□□□ -1.19
SSN3YPL042C YCR085WP25650 117 aa7.64□□□□□ -1.19
SSN3YPL042C GPI18P38211 433 aa7.64□□□□□ -1.19
SSN3YPL042C YLR281CQ05863 155 aa7.64□□□□□ -1.19
SSN3YPL042C JID1Q12350 301 aa7.64□□□□□ -1.19
SSN3YPL042C RPS25AQ3E792 108 aaPredicted RBP7.64□□□□□ -1.19
SSN3YPL042C YHR139C-AO13536 103 aa7.63□□□□□ -1.19
SSN3YPL042C BPH1P25356 2167 aa7.63□□□□□ -1.19
SSN3YPL042C SIM1P40472 476 aa7.63□□□□□ -1.19
SSN3YPL042C YGR050CP53231 118 aa7.63□□□□□ -1.19
SSN3YPL042C YGL015CP33199 130 aa7.63□□□□□ -1.19
SSN3YPL042C SMP1P38128 452 aa7.63□□□□□ -1.19
SSN3YPL042C IRC22P40006 225 aa7.63□□□□□ -1.19
SSN3YPL042C EMC5P40540 141 aa7.63□□□□□ -1.19
SSN3YPL042C YGL088WP53151 121 aa7.63□□□□□ -1.19
SSN3YPL042C SDS23P53172 527 aa7.63□□□□□ -1.19
SSN3YPL042C CAX4P53223 239 aa7.63□□□□□ -1.19
SSN3YPL042C FSH2Q05015 223 aa7.63□□□□□ -1.19
SSN3YPL042C MID2P36027 376 aa7.62□□□□□ -1.19
SSN3YPL042C YNL198CP40166 100 aa7.62□□□□□ -1.19
SSN3YPL042C NCA3P46955 337 aa7.62□□□□□ -1.19
SSN3YPL042C POC4Q12245 148 aaPredicted RBP7.62□□□□□ -1.19
SSN3YPL042C UBC4P15731 148 aa7.61□□□□□ -1.19
SSN3YPL042C KRE1P17260 313 aa7.61□□□□□ -1.19
SSN3YPL042C DFG10P40526 253 aa7.61□□□□□ -1.19
SSN3YPL042C IRC25Q07951 179 aa7.61□□□□□ -1.19
SSN3YPL042C NUM1Q00402 2748 aa7.6□□□□□ -1.19
SSN3YPL042C YCR025CP25352 136 aa7.6□□□□□ -1.19
SSN3YPL042C YCR050CP25630 102 aa7.6□□□□□ -1.19
SSN3YPL042C MIX23P38162 196 aa7.6□□□□□ -1.19
SSN3YPL042C YIR020CP40575 100 aa7.6□□□□□ -1.19
SSN3YPL042C ENV10Q99382 181 aa7.58□□□□□ -1.2
SSN3YPL042C RPL15AP05748 204 aaKnown RBP7.57□□□□□ -1.2
SSN3YPL042C URA5P13298 226 aaKnown RBP7.57□□□□□ -1.2
SSN3YPL042C YBR292CP38357 123 aa7.57□□□□□ -1.2
SSN3YPL042C ATX1P38636 73 aa7.57□□□□□ -1.2
SSN3YPL042C RPL15BP54780 204 aaPredicted RBP7.57□□□□□ -1.2
SSN3YPL042C COX19Q3E731 98 aa7.57□□□□□ -1.2
SSN3YPL042C YGL258W-AQ3E740 77 aa7.57□□□□□ -1.2
SSN3YPL042C YOR376W-AQ3E805 51 aa7.57□□□□□ -1.2
SSN3YPL042C Q0297Q9ZZV8 51 aa7.57□□□□□ -1.2
SSN3YPL042C RPA12P32529 125 aaKnown RBP7.57□□□□□ -1.2
SSN3YPL042C DSK2P48510 373 aa7.57□□□□□ -1.2
SSN3YPL042C ADD37Q03233 198 aa7.57□□□□□ -1.2
SSN3YPL042C MIX17Q03667 156 aa7.57□□□□□ -1.2
SSN3YPL042C GPI19Q04082 140 aa7.56□□□□□ -1.2
SSN3YPL042C HSP12P22943 109 aaKnown RBP7.55□□□□□ -1.2
SSN3YPL042C YHL018WP38744 120 aaPredicted RBP7.55□□□□□ -1.2
SSN3YPL042C SVP26P38869 228 aa7.55□□□□□ -1.2
SSN3YPL042C KNH1P50112 268 aa7.55□□□□□ -1.2
SSN3YPL042C CRH1P53301 507 aa7.55□□□□□ -1.2
SSN3YPL042C YOR015WQ12169 119 aa7.55□□□□□ -1.2
SSN3YPL042C PET8P38921 284 aa7.54□□□□□ -1.2
SSN3YPL042C YGR269WP40326 108 aa7.54□□□□□ -1.2
SSN3YPL042C USV1Q12132 391 aa7.54□□□□□ -1.2
SSN3YPL042C DFM1Q12743 341 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms