RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A YFR035CP43608 114 aa1.8□□□□□ -2.12
YNL054W-AYNL054W-A TRM732Q03496 1420 aa1.8□□□□□ -2.12
YNL054W-AYNL054W-A MED11Q99278 115 aa1.8□□□□□ -2.12
YNL054W-AYNL054W-A MVB12P42939 101 aa1.79□□□□□ -2.12
YNL054W-AYNL054W-A YOR304C-AO14468 76 aa1.78□□□□□ -2.12
YNL054W-AYNL054W-A YIL163CP40448 117 aa1.78□□□□□ -2.12
YNL054W-AYNL054W-A PAM16P42949 149 aa1.77□□□□□ -2.13
YNL054W-AYNL054W-A RPL37BP51402 88 aaKnown RBP1.77□□□□□ -2.13
YNL054W-AYNL054W-A YOR097CQ12274 175 aaPredicted RBP1.77□□□□□ -2.13
YNL054W-AYNL054W-A YHR213W-BQ8TGK1 99 aa1.77□□□□□ -2.13
YNL054W-AYNL054W-A YER188C-AP0C0V2 99 aa1.76□□□□□ -2.13
YNL054W-AYNL054W-A YIR021W-AQ3E739 70 aa1.76□□□□□ -2.13
YNL054W-AYNL054W-A YCR099CP25657 155 aa1.75□□□□□ -2.13
YNL054W-AYNL054W-A YPL261CQ08976 102 aa1.75□□□□□ -2.13
YNL054W-AYNL054W-A RUB1Q03919 77 aa1.74□□□□□ -2.13
YNL054W-AYNL054W-A FIT3Q08907 204 aa1.74□□□□□ -2.13
YNL054W-AYNL054W-A OST5Q92316 86 aa1.74□□□□□ -2.13
YNL054W-AYNL054W-A EMP24P32803 203 aaKnown RBP1.73□□□□□ -2.13
YNL054W-AYNL054W-A COA6Q3E846 104 aa1.73□□□□□ -2.13
YNL054W-AYNL054W-A HUG1Q6Q5K6 68 aa1.73□□□□□ -2.13
YNL054W-AYNL054W-A ENV10Q99382 181 aa1.73□□□□□ -2.13
YNL054W-AYNL054W-A RPL22AP05749 121 aaKnown RBP1.72□□□□□ -2.13
YNL054W-AYNL054W-A YJL197C-AP0C5P0 93 aa1.72□□□□□ -2.13
YNL054W-AYNL054W-A CYB5P40312 120 aa1.72□□□□□ -2.13
YNL054W-AYNL054W-A RTR2Q12378 196 aa1.72□□□□□ -2.13
YNL054W-AYNL054W-A PCC1Q3E833 88 aa1.72□□□□□ -2.13
YNL054W-AYNL054W-A ECM5Q03214 1411 aa1.72□□□□□ -2.13
YNL054W-AYNL054W-A PAU2P32612 120 aa1.71□□□□□ -2.14
YNL054W-AYNL054W-A LHP1P33399 275 aaKnown RBP1.71□□□□□ -2.14
YNL054W-AYNL054W-A COX23P38824 151 aa1.71□□□□□ -2.14
YNL054W-AYNL054W-A YMR141CP40211 102 aa1.71□□□□□ -2.14
YNL054W-AYNL054W-A ARL3Q02804 198 aa1.71□□□□□ -2.14
YNL054W-AYNL054W-A YLR285C-AQ3E771 56 aa1.71□□□□□ -2.14
YNL054W-AYNL054W-A PAU24P38155 120 aa1.7□□□□□ -2.14
YNL054W-AYNL054W-A YER187WP40102 141 aa1.7□□□□□ -2.14
YNL054W-AYNL054W-A TY4B-JP47024 1803 aa1.69□□□□□ -2.14
YNL054W-AYNL054W-A YER039C-AP0CD97 72 aa1.68□□□□□ -2.14
YNL054W-AYNL054W-A SRX1P36077 127 aa1.68□□□□□ -2.14
YNL054W-AYNL054W-A DAD1Q12248 94 aa1.68□□□□□ -2.14
YNL054W-AYNL054W-A MRPL31P14063 131 aaPredicted RBP1.67□□□□□ -2.14
YNL054W-AYNL054W-A SNN1P48232 102 aa1.67□□□□□ -2.14
YNL054W-AYNL054W-A RPL22BP56628 122 aaKnown RBP1.67□□□□□ -2.14
YNL054W-AYNL054W-A HMRA2P0CY13 119 aa1.66□□□□□ -2.14
YNL054W-AYNL054W-A POR2P40478 281 aa1.66□□□□□ -2.14
YNL054W-AYNL054W-A YLR365WQ7LIF2 110 aa1.66□□□□□ -2.14
YNL054W-AYNL054W-A SPP41P38904 1435 aa1.64□□□□□ -2.15
YNL054W-AYNL054W-A PAU19P0CE85 124 aa1.64□□□□□ -2.15
YNL054W-AYNL054W-A PAU3P25610 124 aa1.64□□□□□ -2.15
YNL054W-AYNL054W-A YIR020CP40575 100 aa1.64□□□□□ -2.15
YNL054W-AYNL054W-A YLR363W-AQ3E747 85 aa1.63□□□□□ -2.15
YNL054W-AYNL054W-A LAA1P39526 2014 aa1.62□□□□□ -2.15
YNL054W-AYNL054W-A DNA2P38859 1522 aa1.62□□□□□ -2.15
YNL054W-AYNL054W-A YER137CP40083 148 aaKnown RBP1.62□□□□□ -2.15
YNL054W-AYNL054W-A YMR321CQ04898 105 aa1.62□□□□□ -2.15
YNL054W-AYNL054W-A YGL041C-BQ3E750 60 aa1.62□□□□□ -2.15
YNL054W-AYNL054W-A YEA6P39953 335 aa1.61□□□□□ -2.15
YNL054W-AYNL054W-A YGR240C-AQ3E786 66 aa1.61□□□□□ -2.15
YNL054W-AYNL054W-A RPL43AP0CX25 92 aaKnown RBP1.6□□□□□ -2.15
YNL054W-AYNL054W-A RPL43BP0CX26 92 aa1.6□□□□□ -2.15
YNL054W-AYNL054W-A GTT1P40582 234 aa1.6□□□□□ -2.15
YNL054W-AYNL054W-A ICS3P47034 131 aa1.6□□□□□ -2.15
YNL054W-AYNL054W-A VPS55P47111 140 aa1.6□□□□□ -2.15
YNL054W-AYNL054W-A LCL1Q02786 101 aa1.6□□□□□ -2.15
YNL054W-AYNL054W-A OCA6Q12454 224 aa1.6□□□□□ -2.15
YNL054W-AYNL054W-A YOR034C-AQ3E735 80 aa1.59□□□□□ -2.16
YNL054W-AYNL054W-A YRF1-3P0CX14 1859 aa1.58□□□□□ -2.16
YNL054W-AYNL054W-A YRF1-7P0CX15 1859 aa1.58□□□□□ -2.16
YNL054W-AYNL054W-A BUD23P25627 275 aaPredicted RBP1.58□□□□□ -2.16
YNL054W-AYNL054W-A YJR128WP47162 119 aa1.57□□□□□ -2.16
YNL054W-AYNL054W-A MRPS12P53732 153 aa1.56□□□□□ -2.16
YNL054W-AYNL054W-A PAU16P35994 123 aa1.55□□□□□ -2.16
YNL054W-AYNL054W-A PAU15P40585 124 aa1.55□□□□□ -2.16
YNL054W-AYNL054W-A HUR1P45820 110 aa1.55□□□□□ -2.16
YNL054W-AYNL054W-A TY1B-HO13535 1793 aa1.54□□□□□ -2.16
YNL054W-AYNL054W-A GNA1P43577 159 aaPredicted RBP1.54□□□□□ -2.16
YNL054W-AYNL054W-A RPS12P48589 143 aaKnown RBP1.54□□□□□ -2.16
YNL054W-AYNL054W-A YLR307C-AQ3E825 87 aa1.54□□□□□ -2.16
YNL054W-AYNL054W-A YGR164WP53291 111 aa1.53□□□□□ -2.16
YNL054W-AYNL054W-A YMR103CQ04436 120 aa1.53□□□□□ -2.16
YNL054W-AYNL054W-A MIC10Q96VH5 97 aa1.53□□□□□ -2.16
YNL054W-AYNL054W-A YLR157W-EP0CF00 54 aa1.52□□□□□ -2.17
YNL054W-AYNL054W-A LSM6Q06406 86 aaKnown RBP1.52□□□□□ -2.17
YNL054W-AYNL054W-A VMA21P41806 77 aa1.51□□□□□ -2.17
YNL054W-AYNL054W-A RGI1P40043 161 aaPredicted RBP1.49□□□□□ -2.17
YNL054W-AYNL054W-A LYS2P07702 1392 aa1.49□□□□□ -2.17
YNL054W-AYNL054W-A SWC7Q06707 132 aa1.47□□□□□ -2.17
YNL054W-AYNL054W-A URA2P07259 2214 aaKnown RBP1.46□□□□□ -2.18
YNL054W-AYNL054W-A YPK9Q12697 1472 aa1.46□□□□□ -2.18
YNL054W-AYNL054W-A TSC11P40061 1430 aa1.46□□□□□ -2.18
YNL054W-AYNL054W-A YHR138CP38841 114 aaPredicted RBP1.45□□□□□ -2.18
YNL054W-AYNL054W-A YOS1Q3E834 85 aa1.45□□□□□ -2.18
YNL054W-AYNL054W-A YCR101CP25607 182 aa1.44□□□□□ -2.18
YNL054W-AYNL054W-A YOL118CQ08259 102 aa1.44□□□□□ -2.18
YNL054W-AYNL054W-A YLR255CO13574 117 aa1.43□□□□□ -2.18
YNL054W-AYNL054W-A UBC4P15731 148 aa1.43□□□□□ -2.18
YNL054W-AYNL054W-A AUA1P32450 94 aa1.43□□□□□ -2.18
YNL054W-AYNL054W-A SRB6P32570 121 aa1.43□□□□□ -2.18
YNL054W-AYNL054W-A YMR090WQ04304 227 aaKnown RBP1.43□□□□□ -2.18
YNL054W-AYNL054W-A YCL048W-AQ2V2Q2 79 aa1.43□□□□□ -2.18
YNL054W-AYNL054W-A SEC16P48415 2195 aaKnown RBP1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 107.1 ms