RNA–Protein interactions for RNA: YNL006W

LST8, Transcript of Protein required for the transport of Gap1p, yeastyeast

Gene LST8, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LST8YNL006W TIR1P10863 254 aa4□□□□□ -1.77
LST8YNL006W KEG1P43614 200 aa4□□□□□ -1.77
LST8YNL006W SMT3Q12306 101 aaKnown RBP4□□□□□ -1.77
LST8YNL006W TIM22Q12328 207 aa4□□□□□ -1.77
LST8YNL006W MRPL31P14063 131 aaPredicted RBP3.99□□□□□ -1.77
LST8YNL006W CUP2P15315 225 aa3.99□□□□□ -1.77
LST8YNL006W SEC59P20048 519 aa3.99□□□□□ -1.77
LST8YNL006W LDS1P31379 325 aa3.99□□□□□ -1.77
LST8YNL006W PAM17P36147 197 aa3.99□□□□□ -1.77
LST8YNL006W RPB11P38902 120 aa3.99□□□□□ -1.77
LST8YNL006W KRE9P39005 276 aa3.99□□□□□ -1.77
LST8YNL006W YNL217WP40152 326 aa3.99□□□□□ -1.77
LST8YNL006W BRP1P53194 125 aa3.99□□□□□ -1.77
LST8YNL006W YPR195CQ06594 109 aa3.99□□□□□ -1.77
LST8YNL006W YLR042CQ07990 161 aa3.99□□□□□ -1.77
LST8YNL006W YNL162W-AQ3E7A8 72 aa3.99□□□□□ -1.77
LST8YNL006W FMP49A0A023PZB3 126 aa3.98□□□□□ -1.77
LST8YNL006W YGL010WP25338 174 aa3.98□□□□□ -1.77
LST8YNL006W YCR023CP25351 611 aa3.98□□□□□ -1.77
LST8YNL006W QRI5P32344 111 aa3.98□□□□□ -1.77
LST8YNL006W TOA2P32774 122 aa3.98□□□□□ -1.77
LST8YNL006W MRPL28P36527 147 aa3.98□□□□□ -1.77
LST8YNL006W COX16P47081 118 aa3.98□□□□□ -1.77
LST8YNL006W YGR026WP53217 278 aa3.98□□□□□ -1.77
LST8YNL006W YDR366CP87287 132 aa3.98□□□□□ -1.77
LST8YNL006W AIM34Q03673 198 aa3.98□□□□□ -1.77
LST8YNL006W GIM5Q04493 163 aa3.98□□□□□ -1.77
LST8YNL006W DXO1Q06349 442 aa3.98□□□□□ -1.77
LST8YNL006W UTP23Q12339 254 aaKnown RBP3.98□□□□□ -1.77
LST8YNL006W DCN1Q12395 269 aa3.98□□□□□ -1.77
LST8YNL006W YCR075W-AQ3E830 75 aa3.98□□□□□ -1.77
LST8YNL006W MIX23P38162 196 aa3.97□□□□□ -1.77
LST8YNL006W DIA1P54005 336 aa3.97□□□□□ -1.77
LST8YNL006W MRPS9P38120 278 aa3.96□□□□□ -1.78
LST8YNL006W MOG1P47123 218 aa3.96□□□□□ -1.78
LST8YNL006W UPS3Q04006 179 aa3.96□□□□□ -1.78
LST8YNL006W SNU23Q12368 194 aaPredicted RBP3.96□□□□□ -1.78
LST8YNL006W VMA21P41806 77 aa3.95□□□□□ -1.78
LST8YNL006W THG1P53215 237 aaKnown RBP3.95□□□□□ -1.78
LST8YNL006W GPI19Q04082 140 aa3.95□□□□□ -1.78
LST8YNL006W ARC18Q05933 178 aaKnown RBP3.95□□□□□ -1.78
LST8YNL006W DGA1Q08650 418 aa3.95□□□□□ -1.78
LST8YNL006W CSM4Q08955 156 aa3.95□□□□□ -1.78
LST8YNL006W RPL42AP0CX27 106 aaKnown RBP3.94□□□□□ -1.78
LST8YNL006W RPL42BP0CX28 106 aaKnown RBP3.94□□□□□ -1.78
LST8YNL006W YKR032WP36127 104 aa3.94□□□□□ -1.78
LST8YNL006W YCH1P42937 148 aa3.94□□□□□ -1.78
LST8YNL006W YGR240C-AQ3E786 66 aa3.94□□□□□ -1.78
LST8YNL006W YNR034W-AQ3E841 98 aa3.94□□□□□ -1.78
LST8YNL006W YLL066W-BQ8TGJ7 56 aa3.94□□□□□ -1.78
LST8YNL006W ADH3P07246 375 aaKnown RBP3.93□□□□□ -1.78
LST8YNL006W CNB1P25296 175 aa3.93□□□□□ -1.78
LST8YNL006W ZRT1P32804 376 aa3.93□□□□□ -1.78
LST8YNL006W ATG8P38182 117 aaRIP-Chip data3.93□□□□□ -1.78not detected
LST8YNL006W YHR140WP38842 239 aa3.93□□□□□ -1.78
LST8YNL006W IRC22P40006 225 aa3.93□□□□□ -1.78
LST8YNL006W MGA1P53050 456 aa3.93□□□□□ -1.78
LST8YNL006W SDS23P53172 527 aa3.93□□□□□ -1.78
LST8YNL006W DPP1Q05521 289 aa3.93□□□□□ -1.78
LST8YNL006W YLR118CQ12354 227 aa3.93□□□□□ -1.78
LST8YNL006W KTI12P34253 313 aaKnown RBP3.92□□□□□ -1.78
LST8YNL006W PET8P38921 284 aa3.92□□□□□ -1.78
LST8YNL006W SUR2P38992 349 aa3.92□□□□□ -1.78
LST8YNL006W DAN1P47178 298 aa3.92□□□□□ -1.78
LST8YNL006W PBA1Q05778 276 aa3.92□□□□□ -1.78
LST8YNL006W RPL27AP0C2H6 136 aaKnown RBP3.91□□□□□ -1.78
LST8YNL006W HMRA1P0CY11 126 aa3.91□□□□□ -1.78
LST8YNL006W NHP6AP11632 93 aaKnown RBP3.91□□□□□ -1.78
LST8YNL006W HSP10P38910 106 aa3.91□□□□□ -1.78
LST8YNL006W ERG28P40030 148 aa3.91□□□□□ -1.78
LST8YNL006W GAT4P40569 121 aa3.91□□□□□ -1.78
LST8YNL006W APS2Q00381 147 aa3.91□□□□□ -1.78
LST8YNL006W YOP1Q12402 180 aa3.91□□□□□ -1.78
LST8YNL006W RPL23AP0CX41 137 aaKnown RBP3.9□□□□□ -1.79
LST8YNL006W RPL23BP0CX42 137 aaKnown RBP3.9□□□□□ -1.79
LST8YNL006W YBR013CP38215 129 aa3.9□□□□□ -1.79
LST8YNL006W PAU7P39545 55 aa3.9□□□□□ -1.79
LST8YNL006W PAU5P43575 122 aa3.9□□□□□ -1.79
LST8YNL006W YPL080CQ02826 108 aa3.9□□□□□ -1.79
LST8YNL006W YKL183C-AQ3E765 70 aa3.9□□□□□ -1.79
LST8YNL006W RRT15Q3E811 62 aa3.9□□□□□ -1.79
LST8YNL006W RPL27BP0C2H7 136 aaKnown RBP3.89□□□□□ -1.79
LST8YNL006W UBC5P15732 148 aa3.89□□□□□ -1.79
LST8YNL006W PAU15P40585 124 aa3.89□□□□□ -1.79
LST8YNL006W SPC1P46965 94 aa3.89□□□□□ -1.79
LST8YNL006W YGL088WP53151 121 aa3.89□□□□□ -1.79
LST8YNL006W BET5Q03630 159 aa3.89□□□□□ -1.79
LST8YNL006W TVP18Q04767 167 aa3.89□□□□□ -1.79
LST8YNL006W FSF1Q12029 327 aaKnown RBP3.89□□□□□ -1.79
LST8YNL006W YCR024C-BQ3E7Z8 88 aa3.89□□□□□ -1.79
LST8YNL006W SEC4P07560 215 aaKnown RBP3.88□□□□□ -1.79
LST8YNL006W NSE4P43124 402 aa3.88□□□□□ -1.79
LST8YNL006W GIS2P53849 153 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
LST8YNL006W RPL33AP05744 107 aaKnown RBP3.87□□□□□ -1.79
LST8YNL006W YBR121C-AP0C5L4 52 aa3.87□□□□□ -1.79
LST8YNL006W ANB1P19211 157 aa3.87□□□□□ -1.79
LST8YNL006W TEM1P38987 245 aa3.87□□□□□ -1.79
LST8YNL006W YNL200CP40165 246 aaKnown RBP3.87□□□□□ -1.79
LST8YNL006W RPL33BP41056 107 aaKnown RBP3.87□□□□□ -1.79
LST8YNL006W DCV1P43595 202 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 90.3 ms