RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W TIM8P57744 87 aa0.43□□□□□ -2.34
DDR48YMR173W SPC24Q04477 213 aa0.43□□□□□ -2.34
DDR48YMR173W YGL041C-BQ3E750 60 aa0.43□□□□□ -2.34
DDR48YMR173W SLO1Q3E784 85 aa0.43□□□□□ -2.34
DDR48YMR173W YLR361C-AQ3E795 98 aa0.43□□□□□ -2.34
DDR48YMR173W LAA1P39526 2014 aa0.43□□□□□ -2.34
DDR48YMR173W TRS20P38334 175 aa0.42□□□□□ -2.34
DDR48YMR173W VMA7P39111 118 aa0.42□□□□□ -2.34
DDR48YMR173W YEA6P39953 335 aa0.42□□□□□ -2.34
DDR48YMR173W CYB5P40312 120 aa0.42□□□□□ -2.34
DDR48YMR173W ICS3P47034 131 aa0.42□□□□□ -2.34
DDR48YMR173W YLR194CQ05777 254 aa0.42□□□□□ -2.34
DDR48YMR173W YRF1-3P0CX14 1859 aa0.41□□□□□ -2.34
DDR48YMR173W YRF1-7P0CX15 1859 aa0.41□□□□□ -2.34
DDR48YMR173W RAD50P12753 1312 aa0.41□□□□□ -2.34
DDR48YMR173W RPB11P38902 120 aa0.41□□□□□ -2.34
DDR48YMR173W TDA2P40045 126 aa0.41□□□□□ -2.34
DDR48YMR173W YIL014C-AQ02598 104 aa0.41□□□□□ -2.34
DDR48YMR173W OCA6Q12454 224 aa0.41□□□□□ -2.34
DDR48YMR173W YLR285C-AQ3E771 56 aa0.41□□□□□ -2.34
DDR48YMR173W YGR240C-AQ3E786 66 aa0.41□□□□□ -2.34
DDR48YMR173W TRM732Q03496 1420 aa0.4□□□□□ -2.34
DDR48YMR173W ACP1P32463 125 aa0.4□□□□□ -2.35
DDR48YMR173W AIM11P87275 137 aa0.4□□□□□ -2.35
DDR48YMR173W YLR363W-AQ3E747 85 aa0.4□□□□□ -2.35
DDR48YMR173W GAT4P40569 121 aa0.39□□□□□ -2.35
DDR48YMR173W YFR035CP43608 114 aa0.39□□□□□ -2.35
DDR48YMR173W VPS55P47111 140 aa0.39□□□□□ -2.35
DDR48YMR173W YPL261CQ08976 102 aa0.39□□□□□ -2.35
DDR48YMR173W PCC1Q3E833 88 aa0.39□□□□□ -2.35
DDR48YMR173W OST5Q92316 86 aa0.39□□□□□ -2.35
DDR48YMR173W MYO2P19524 1574 aaKnown RBP0.38□□□□□ -2.35
DDR48YMR173W SNN1P48232 102 aa0.38□□□□□ -2.35
DDR48YMR173W RPL22BP56628 122 aaKnown RBP0.38□□□□□ -2.35
DDR48YMR173W LCL1Q02786 101 aa0.38□□□□□ -2.35
DDR48YMR173W DAD1Q12248 94 aa0.38□□□□□ -2.35
DDR48YMR173W YLR099W-AQ3E798 87 aa0.38□□□□□ -2.35
DDR48YMR173W YOR376W-AQ3E805 51 aa0.38□□□□□ -2.35
DDR48YMR173W YJL197C-AP0C5P0 93 aa0.37□□□□□ -2.35
DDR48YMR173W HMRA2P0CY13 119 aa0.37□□□□□ -2.35
DDR48YMR173W COX23P38824 151 aa0.37□□□□□ -2.35
DDR48YMR173W YHR130CP38834 111 aa0.37□□□□□ -2.35
DDR48YMR173W YHR173CP38864 112 aa0.37□□□□□ -2.35
DDR48YMR173W RPS29BP41058 56 aaKnown RBP0.37□□□□□ -2.35
DDR48YMR173W PAU12P53343 120 aa0.37□□□□□ -2.35
DDR48YMR173W APS2Q00381 147 aa0.37□□□□□ -2.35
DDR48YMR173W YLR118CQ12354 227 aa0.37□□□□□ -2.35
DDR48YMR173W ECM5Q03214 1411 aa0.37□□□□□ -2.35
DDR48YMR173W TY1B-HO13535 1793 aa0.37□□□□□ -2.35
DDR48YMR173W YCR099CP25657 155 aa0.36□□□□□ -2.35
DDR48YMR173W GTT1P40582 234 aa0.36□□□□□ -2.35
DDR48YMR173W YDR010CQ12426 110 aa0.36□□□□□ -2.35
DDR48YMR173W WIP1Q2V2P8 89 aa0.36□□□□□ -2.35
DDR48YMR173W YBR072C-AQ3E794 53 aa0.36□□□□□ -2.35
DDR48YMR173W PAM16P42949 149 aa0.35□□□□□ -2.35
DDR48YMR173W RTR2Q12378 196 aa0.35□□□□□ -2.35
DDR48YMR173W YOL164W-AQ3E7A5 60 aa0.35□□□□□ -2.35
DDR48YMR173W YPK9Q12697 1472 aa0.35□□□□□ -2.35
DDR48YMR173W BNI1P41832 1953 aa0.34□□□□□ -2.35
DDR48YMR173W AUA1P32450 94 aa0.34□□□□□ -2.36
DDR48YMR173W SRB6P32570 121 aa0.34□□□□□ -2.36
DDR48YMR173W YER187WP40102 141 aa0.34□□□□□ -2.36
DDR48YMR173W YLR042CQ07990 161 aa0.34□□□□□ -2.36
DDR48YMR173W YOR097CQ12274 175 aaPredicted RBP0.34□□□□□ -2.36
DDR48YMR173W ADK1P07170 222 aaKnown RBP0.33□□□□□ -2.36
DDR48YMR173W PAU19P0CE85 124 aa0.33□□□□□ -2.36
DDR48YMR173W PAU3P25610 124 aa0.33□□□□□ -2.36
DDR48YMR173W PAU2P32612 120 aa0.33□□□□□ -2.36
DDR48YMR173W PAU24P38155 120 aa0.33□□□□□ -2.36
DDR48YMR173W YAR029WP39549 74 aa0.33□□□□□ -2.36
DDR48YMR173W YGR164WP53291 111 aa0.33□□□□□ -2.36
DDR48YMR173W LSM6Q06406 86 aaKnown RBP0.33□□□□□ -2.36
DDR48YMR173W YLR365WQ7LIF2 110 aa0.33□□□□□ -2.36
DDR48YMR173W FAS2P19097 1887 aaKnown RBP0.33□□□□□ -2.36
DDR48YMR173W DNA2P38859 1522 aa0.33□□□□□ -2.36
DDR48YMR173W BLM10P43583 2143 aa0.32□□□□□ -2.36
DDR48YMR173W URA2P07259 2214 aaKnown RBP0.32□□□□□ -2.36
DDR48YMR173W VMA21P41806 77 aa0.32□□□□□ -2.36
DDR48YMR173W RUB1Q03919 77 aa0.32□□□□□ -2.36
DDR48YMR173W SNF2P22082 1703 aa0.32□□□□□ -2.36
DDR48YMR173W TY4B-HP0C2J7 1802 aa0.31□□□□□ -2.36
DDR48YMR173W YHR138CP38841 114 aaPredicted RBP0.31□□□□□ -2.36
DDR48YMR173W YIR020CP40575 100 aa0.31□□□□□ -2.36
DDR48YMR173W IMP2P46972 177 aa0.31□□□□□ -2.36
DDR48YMR173W YOL118CQ08259 102 aa0.31□□□□□ -2.36
DDR48YMR173W YCL048W-AQ2V2Q2 79 aa0.31□□□□□ -2.36
DDR48YMR173W YRF1-6P53819 1859 aa0.31□□□□□ -2.36
DDR48YMR173W MYO1P08964 1928 aa0.3□□□□□ -2.36
DDR48YMR173W SHU1P38751 150 aa0.3□□□□□ -2.36
DDR48YMR173W YIL086CP40503 102 aa0.3□□□□□ -2.36
DDR48YMR173W MRPS12P53732 153 aa0.3□□□□□ -2.36
DDR48YMR173W SEC16P48415 2195 aaKnown RBP0.3□□□□□ -2.36
DDR48YMR173W SEC7P11075 2009 aaKnown RBP0.3□□□□□ -2.36
DDR48YMR173W YOR304C-AO14468 76 aa0.29□□□□□ -2.36
DDR48YMR173W GCV3P39726 170 aaPredicted RBP0.29□□□□□ -2.36
DDR48YMR173W PAU15P40585 124 aa0.29□□□□□ -2.36
DDR48YMR173W HUR1P45820 110 aa0.29□□□□□ -2.36
DDR48YMR173W SWC7Q06707 132 aa0.29□□□□□ -2.36
DDR48YMR173W YIR021W-AQ3E739 70 aa0.29□□□□□ -2.36
DDR48YMR173W URB1P34241 1764 aaKnown RBP0.29□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms