RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C YKR041WP36134 250 aa2.57□□□□□ -2
VPS33YLR396C ATP19P81451 68 aa2.57□□□□□ -2
VPS33YLR396C MRX11Q03079 207 aa2.57□□□□□ -2
VPS33YLR396C YDR102CQ03864 110 aa2.57□□□□□ -2
VPS33YLR396C RAV2Q03956 351 aa2.57□□□□□ -2
VPS33YLR396C HPA2Q06592 156 aa2.57□□□□□ -2
VPS33YLR396C VPS68Q12016 184 aa2.57□□□□□ -2
VPS33YLR396C FCY1Q12178 158 aa2.57□□□□□ -2
VPS33YLR396C RPL30P14120 105 aaKnown RBP2.56□□□□□ -2
VPS33YLR396C APS1P35181 156 aa2.56□□□□□ -2
VPS33YLR396C CCS1P40202 249 aaKnown RBP2.56□□□□□ -2
VPS33YLR396C YPL073CP40323 161 aa2.56□□□□□ -2
VPS33YLR396C CWP2P43497 92 aa2.56□□□□□ -2
VPS33YLR396C YIP3P53633 176 aa2.56□□□□□ -2
VPS33YLR396C SPO24Q3E752 67 aa2.56□□□□□ -2
VPS33YLR396C YAL063C-AQ3E791 96 aa2.56□□□□□ -2
VPS33YLR396C RPS14AP06367 137 aaKnown RBP2.56□□□□□ -2
VPS33YLR396C CSH1P38287 376 aa2.56□□□□□ -2
VPS33YLR396C PET8P38921 284 aa2.56□□□□□ -2
VPS33YLR396C RPS14BP39516 138 aaKnown RBP2.56□□□□□ -2
VPS33YLR396C YER181CP40097 107 aa2.56□□□□□ -2
VPS33YLR396C LST8P41318 303 aa2.56□□□□□ -2
VPS33YLR396C YFR045WP43617 309 aa2.56□□□□□ -2
VPS33YLR396C USB1Q12208 290 aaKnown RBP2.56□□□□□ -2
VPS33YLR396C HTL1Q9URQ5 78 aa2.56□□□□□ -2
VPS33YLR396C MRPL31P14063 131 aaPredicted RBP2.55□□□□□ -2
VPS33YLR396C YPS1P32329 569 aa2.55□□□□□ -2
VPS33YLR396C VMA11P32842 164 aa2.55□□□□□ -2
VPS33YLR396C YEL067CP39978 195 aa2.55□□□□□ -2
VPS33YLR396C OSW5P40219 148 aa2.55□□□□□ -2
VPS33YLR396C YIL059CP40520 121 aa2.55□□□□□ -2
VPS33YLR396C TOM7P53507 60 aa2.55□□□□□ -2
VPS33YLR396C YDR042CQ03205 200 aa2.55□□□□□ -2
VPS33YLR396C YHP1Q04116 353 aa2.55□□□□□ -2
VPS33YLR396C YDR115WQ04598 105 aa2.55□□□□□ -2
VPS33YLR396C IRC19Q07843 230 aa2.55□□□□□ -2
VPS33YLR396C YPS3Q12303 508 aa2.55□□□□□ -2
VPS33YLR396C MPD1Q12404 318 aaKnown RBP2.55□□□□□ -2
VPS33YLR396C ENV10Q99382 181 aa2.55□□□□□ -2
VPS33YLR396C RPL27BP0C2H7 136 aaKnown RBP2.54□□□□□ -2
VPS33YLR396C MID2P36027 376 aa2.54□□□□□ -2
VPS33YLR396C YHR173CP38864 112 aa2.54□□□□□ -2
VPS33YLR396C YER085CP40058 173 aa2.54□□□□□ -2
VPS33YLR396C YMR103CQ04436 120 aa2.54□□□□□ -2
VPS33YLR396C RAF1Q06891 181 aa2.54□□□□□ -2
VPS33YLR396C YRA1Q12159 226 aaKnown RBP2.54□□□□□ -2
VPS33YLR396C RFM1Q12192 310 aa2.54□□□□□ -2
VPS33YLR396C YDR119W-AQ2V2P9 66 aa2.54□□□□□ -2
VPS33YLR396C BOL1Q3E793 110 aa2.54□□□□□ -2
VPS33YLR396C YFL041W-AQ3E817 63 aa2.54□□□□□ -2
VPS33YLR396C PAU7P39545 55 aa2.54□□□□□ -2
VPS33YLR396C PEX22P39718 180 aa2.54□□□□□ -2
VPS33YLR396C UBC7Q02159 165 aa2.54□□□□□ -2
VPS33YLR396C YOR097CQ12274 175 aaPredicted RBP2.54□□□□□ -2
VPS33YLR396C YHR214C-EQ8TGK0 99 aa2.54□□□□□ -2
VPS33YLR396C CYR1P08678 2026 aaKnown RBP2.53□□□□□ -2
VPS33YLR396C UBC5P15732 148 aa2.53□□□□□ -2
VPS33YLR396C HSP12P22943 109 aaKnown RBP2.53□□□□□ -2
VPS33YLR396C KNH1P50112 268 aa2.53□□□□□ -2
VPS33YLR396C FIT2Q08906 153 aa2.53□□□□□ -2
VPS33YLR396C SEC16P48415 2195 aaKnown RBP2.53□□□□□ -2
VPS33YLR396C MDM35O60200 86 aa2.53□□□□□ -2.01
VPS33YLR396C RAD6P06104 172 aa2.53□□□□□ -2.01
VPS33YLR396C YDL022C-AP0C5L6 82 aa2.53□□□□□ -2.01
VPS33YLR396C TOM40P23644 387 aaKnown RBP2.53□□□□□ -2.01
VPS33YLR396C YCR085WP25650 117 aa2.53□□□□□ -2.01
VPS33YLR396C IMP1P28627 190 aa2.53□□□□□ -2.01
VPS33YLR396C HSP150P32478 413 aa2.53□□□□□ -2.01
VPS33YLR396C YKR032WP36127 104 aa2.53□□□□□ -2.01
VPS33YLR396C NRG2P38082 220 aa2.53□□□□□ -2.01
VPS33YLR396C TIF34P40217 347 aaKnown RBP2.53□□□□□ -2.01
VPS33YLR396C BLM10P43583 2143 aa2.53□□□□□ -2.01
VPS33YLR396C UBC13P52490 153 aa2.53□□□□□ -2.01
VPS33YLR396C YNR077CP53758 84 aa2.53□□□□□ -2.01
VPS33YLR396C FCF1Q05498 189 aaPredicted RBP2.53□□□□□ -2.01
VPS33YLR396C LSM6Q06406 86 aaKnown RBP2.53□□□□□ -2.01
VPS33YLR396C YDR029WQ12111 104 aa2.53□□□□□ -2.01
VPS33YLR396C BEM2P39960 2167 aaKnown RBP2.52□□□□□ -2.01
VPS33YLR396C ECM12O13529 151 aa2.52□□□□□ -2.01
VPS33YLR396C YSF3P0C074 85 aaPredicted RBP2.52□□□□□ -2.01
VPS33YLR396C RPL27AP0C2H6 136 aaKnown RBP2.52□□□□□ -2.01
VPS33YLR396C YBR121C-AP0C5L4 52 aa2.52□□□□□ -2.01
VPS33YLR396C ROX3P25046 220 aa2.52□□□□□ -2.01
VPS33YLR396C SMP1P38128 452 aa2.52□□□□□ -2.01
VPS33YLR396C ERG28P40030 148 aa2.52□□□□□ -2.01
VPS33YLR396C VPS55P47111 140 aa2.52□□□□□ -2.01
VPS33YLR396C HST4P53688 370 aa2.52□□□□□ -2.01
VPS33YLR396C RRG8Q06109 277 aa2.52□□□□□ -2.01
VPS33YLR396C ACC1Q00955 2233 aaKnown RBP2.51□□□□□ -2.01
VPS33YLR396C YAL064W-BO13512 126 aa2.51□□□□□ -2.01
VPS33YLR396C DSE2P38844 325 aa2.51□□□□□ -2.01
VPS33YLR396C SKI6P46948 246 aaPredicted RBP2.51□□□□□ -2.01
VPS33YLR396C CIS3P47001 227 aa2.51□□□□□ -2.01
VPS33YLR396C RDL2Q08742 149 aaKnown RBP2.51□□□□□ -2.01
VPS33YLR396C YGL258W-AQ3E740 77 aa2.51□□□□□ -2.01
VPS33YLR396C YOL085CQ99345 113 aa2.51□□□□□ -2.01
VPS33YLR396C POL2P21951 2222 aaKnown RBP2.51□□□□□ -2.01
VPS33YLR396C VPS63O13549 108 aa2.51□□□□□ -2.01
VPS33YLR396C RPS28BP0C0X0 67 aaKnown RBP2.51□□□□□ -2.01
VPS33YLR396C YHR140WP38842 239 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms