RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W SPG3Q04398 127 aaPredicted RBP3.53□□□□□ -1.84
AVT1YJR001W YMR175W-AQ3E766 64 aa3.53□□□□□ -1.84
AVT1YJR001W YFL041W-AQ3E817 63 aa3.53□□□□□ -1.84
AVT1YJR001W YEL028WP39989 153 aa3.52□□□□□ -1.85
AVT1YJR001W SKI6P46948 246 aaPredicted RBP3.52□□□□□ -1.85
AVT1YJR001W MIC27P50945 234 aa3.52□□□□□ -1.85
AVT1YJR001W NDD1Q08887 554 aa3.52□□□□□ -1.85
AVT1YJR001W YFR032C-BQ8TGU2 87 aa3.52□□□□□ -1.85
AVT1YJR001W YCL021W-AQ96VH3 125 aa3.52□□□□□ -1.85
AVT1YJR001W HHF1P02309 103 aaKnown RBP3.51□□□□□ -1.85
AVT1YJR001W NHP2P32495 156 aaPredicted RBP3.51□□□□□ -1.85
AVT1YJR001W SWD3P38123 315 aa3.51□□□□□ -1.85
AVT1YJR001W YFR035CP43608 114 aa3.51□□□□□ -1.85
AVT1YJR001W YDR042CQ03205 200 aa3.51□□□□□ -1.85
AVT1YJR001W MIX14Q04341 121 aa3.51□□□□□ -1.85
AVT1YJR001W YPR011CQ12251 326 aa3.51□□□□□ -1.85
AVT1YJR001W YAL063C-AQ3E791 96 aa3.51□□□□□ -1.85
AVT1YJR001W RPS8AP0CX39 200 aaKnown RBP3.51□□□□□ -1.85
AVT1YJR001W RPS8BP0CX40 200 aaKnown RBP3.51□□□□□ -1.85
AVT1YJR001W OM14P38325 134 aa3.51□□□□□ -1.85
AVT1YJR001W FYV4P38783 130 aaPredicted RBP3.51□□□□□ -1.85
AVT1YJR001W HTD2P38790 280 aaKnown RBP3.51□□□□□ -1.85
AVT1YJR001W BNS1P50084 137 aa3.51□□□□□ -1.85
AVT1YJR001W LPP1Q04396 274 aa3.51□□□□□ -1.85
AVT1YJR001W ELP6Q04868 273 aa3.51□□□□□ -1.85
AVT1YJR001W ATG41Q12048 136 aa3.51□□□□□ -1.85
AVT1YJR001W EMC6Q12431 108 aa3.51□□□□□ -1.85
AVT1YJR001W NAG1Q8TGN9 163 aa3.51□□□□□ -1.85
AVT1YJR001W CYR1P08678 2026 aaKnown RBP3.51□□□□□ -1.85
AVT1YJR001W BET1P22804 142 aa3.5□□□□□ -1.85
AVT1YJR001W SPG1P50088 95 aa3.5□□□□□ -1.85
AVT1YJR001W RRT7Q07829 113 aa3.5□□□□□ -1.85
AVT1YJR001W YOR385WQ08909 290 aa3.5□□□□□ -1.85
AVT1YJR001W YMR030W-AQ3E760 96 aa3.5□□□□□ -1.85
AVT1YJR001W YLR365WQ7LIF2 110 aa3.5□□□□□ -1.85
AVT1YJR001W RPL42AP0CX27 106 aaKnown RBP3.49□□□□□ -1.85
AVT1YJR001W RPL42BP0CX28 106 aaKnown RBP3.49□□□□□ -1.85
AVT1YJR001W URA5P13298 226 aaKnown RBP3.49□□□□□ -1.85
AVT1YJR001W SNF11P38956 169 aa3.49□□□□□ -1.85
AVT1YJR001W YJR085CP47131 105 aaKnown RBP3.49□□□□□ -1.85
AVT1YJR001W SWT21P53873 357 aaPredicted RBP3.49□□□□□ -1.85
AVT1YJR001W TVP15Q03860 143 aa3.49□□□□□ -1.85
AVT1YJR001W YLR296WQ05898 108 aa3.49□□□□□ -1.85
AVT1YJR001W NIP7Q08962 181 aaKnown RBP3.49□□□□□ -1.85
AVT1YJR001W RRT15Q3E811 62 aa3.49□□□□□ -1.85
AVT1YJR001W UMP1P38293 148 aa3.49□□□□□ -1.85
AVT1YJR001W YHL042WP38729 150 aa3.49□□□□□ -1.85
AVT1YJR001W EMI1Q04406 187 aa3.49□□□□□ -1.85
AVT1YJR001W RIM9Q04734 239 aa3.49□□□□□ -1.85
AVT1YJR001W YMR254CQ04838 102 aa3.49□□□□□ -1.85
AVT1YJR001W SYM1Q06563 197 aa3.49□□□□□ -1.85
AVT1YJR001W TIM22Q12328 207 aa3.49□□□□□ -1.85
AVT1YJR001W YPR053CQ6Q5F3 151 aa3.49□□□□□ -1.85
AVT1YJR001W SEC11P15367 167 aa3.48□□□□□ -1.85
AVT1YJR001W ERG2P32352 222 aa3.48□□□□□ -1.85
AVT1YJR001W HOT13P36078 116 aa3.48□□□□□ -1.85
AVT1YJR001W TDA2P40045 126 aa3.48□□□□□ -1.85
AVT1YJR001W YNL200CP40165 246 aaKnown RBP3.48□□□□□ -1.85
AVT1YJR001W PGU1P47180 361 aa3.48□□□□□ -1.85
AVT1YJR001W COX12Q01519 83 aa3.48□□□□□ -1.85
AVT1YJR001W HAL1Q01766 294 aa3.48□□□□□ -1.85
AVT1YJR001W AYT1Q12226 474 aa3.48□□□□□ -1.85
AVT1YJR001W COX19Q3E731 98 aa3.48□□□□□ -1.85
AVT1YJR001W YPL038W-AQ3E7B4 63 aa3.48□□□□□ -1.85
AVT1YJR001W YML100W-AQ8TGT0 57 aa3.48□□□□□ -1.85
AVT1YJR001W ODC2Q99297 307 aa3.48□□□□□ -1.85
AVT1YJR001W DDR48P18899 430 aaKnown RBP3.47□□□□□ -1.85
AVT1YJR001W YAL064WP39711 94 aa3.47□□□□□ -1.85
AVT1YJR001W RRT13P40042 185 aa3.47□□□□□ -1.85
AVT1YJR001W YGL262WP53054 175 aa3.47□□□□□ -1.85
AVT1YJR001W ASK1P35734 292 aa3.47□□□□□ -1.85
AVT1YJR001W YNL208WP40159 199 aaKnown RBP3.47□□□□□ -1.85
AVT1YJR001W NCA3P46955 337 aa3.47□□□□□ -1.85
AVT1YJR001W YNR064CP53750 290 aa3.47□□□□□ -1.85
AVT1YJR001W ATO3Q12359 275 aa3.47□□□□□ -1.85
AVT1YJR001W YHR213WP0CI67 198 aa3.46□□□□□ -1.86
AVT1YJR001W MSA2P36157 363 aa3.46□□□□□ -1.86
AVT1YJR001W YER135CP40082 130 aa3.46□□□□□ -1.86
AVT1YJR001W YJL028WP47062 111 aa3.46□□□□□ -1.86
AVT1YJR001W HPA2Q06592 156 aa3.46□□□□□ -1.86
AVT1YJR001W YDR381C-AQ3E6R5 114 aa3.46□□□□□ -1.86
AVT1YJR001W YOR020W-AQ3E824 90 aa3.46□□□□□ -1.86
AVT1YJR001W SCS22Q6Q595 175 aa3.46□□□□□ -1.86
AVT1YJR001W VPS13Q07878 3144 aa3.46□□□□□ -1.86
AVT1YJR001W RPB9P27999 122 aa3.45□□□□□ -1.86
AVT1YJR001W FLO5P38894 1075 aa3.45□□□□□ -1.86
AVT1YJR001W YNL217WP40152 326 aa3.45□□□□□ -1.86
AVT1YJR001W RPR2P40571 144 aa3.45□□□□□ -1.86
AVT1YJR001W YFL019CP43576 117 aa3.45□□□□□ -1.86
AVT1YJR001W CRH1P53301 507 aa3.45□□□□□ -1.86
AVT1YJR001W YOR105WQ08504 108 aa3.45□□□□□ -1.86
AVT1YJR001W YPL247CQ12523 523 aa3.45□□□□□ -1.86
AVT1YJR001W YKL023C-AQ2V2P3 75 aa3.45□□□□□ -1.86
AVT1YJR001W YKR045CP36138 183 aa3.44□□□□□ -1.86
AVT1YJR001W HUR1P45820 110 aa3.44□□□□□ -1.86
AVT1YJR001W BOL2P53082 120 aa3.44□□□□□ -1.86
AVT1YJR001W YOL014WQ08110 124 aa3.44□□□□□ -1.86
AVT1YJR001W YEL045CP32616 141 aa3.44□□□□□ -1.86
AVT1YJR001W YKL044WP36092 106 aa3.44□□□□□ -1.86
AVT1YJR001W HSP10P38910 106 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms