RNA–Protein interactions for RNA: YIL019W

FAF1, Transcript of Protein required for pre-rRNA processing, yeast

Gene FAF1, Length 1,041 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAF1	YIL019W	YMR007W	Q03675	126 aa		3.19	□□□□□ -1.9
FAF1	YIL019W	YKL068W-A	Q3E826	78 aa		3.19	□□□□□ -1.9
FAF1	YIL019W	PDR11	P40550	1411 aa		3.19	□□□□□ -1.9
FAF1	YIL019W	KRE5	P22023	1365 aa		3.18	□□□□□ -1.9
FAF1	YIL019W	RPL36B	O14455	100 aa	Known RBP	3.18	□□□□□ -1.9
FAF1	YIL019W	RPL36A	P05745	100 aa	Predicted RBP	3.18	□□□□□ -1.9
FAF1	YIL019W	PFY1	P07274	126 aa		3.18	□□□□□ -1.9
FAF1	YIL019W	AIM4	P38305	123 aa	Predicted RBP	3.18	□□□□□ -1.9
FAF1	YIL019W	COA4	Q05809	96 aa		3.18	□□□□□ -1.9
FAF1	YIL019W	YCR099C	P25657	155 aa		3.17	□□□□□ -1.9
FAF1	YIL019W	YEA6	P39953	335 aa		3.17	□□□□□ -1.9
FAF1	YIL019W	TDA2	P40045	126 aa		3.17	□□□□□ -1.9
FAF1	YIL019W	PAM16	P42949	149 aa		3.17	□□□□□ -1.9
FAF1	YIL019W	YNL122C	P53921	115 aa	Predicted RBP	3.16	□□□□□ -1.9
FAF1	YIL019W	IRC21	Q04772	201 aa		3.16	□□□□□ -1.9
FAF1	YIL019W	HUA1	P40325	198 aa		3.15	□□□□□ -1.91
FAF1	YIL019W	MON2	P48563	1636 aa	Predicted RBP	3.15	□□□□□ -1.91
FAF1	YIL019W	UBC5	P15732	148 aa		3.14	□□□□□ -1.91
FAF1	YIL019W	YCR001W	P25347	104 aa		3.14	□□□□□ -1.91
FAF1	YIL019W	NHP10	Q03435	203 aa		3.14	□□□□□ -1.91
FAF1	YIL019W	YOL013W-A	P0C272	63 aa	Predicted RBP	3.13	□□□□□ -1.91
FAF1	YIL019W	YGR164W	P53291	111 aa		3.13	□□□□□ -1.91
FAF1	YIL019W	GSC2	P40989	1895 aa		3.13	□□□□□ -1.91
FAF1	YIL019W	GEA2	P39993	1459 aa	Known RBP	3.12	□□□□□ -1.91
FAF1	YIL019W	YIL102C	P40488	101 aa		3.12	□□□□□ -1.91
FAF1	YIL019W	LCL2	Q08045	131 aa		3.12	□□□□□ -1.91
FAF1	YIL019W	MED11	Q99278	115 aa		3.12	□□□□□ -1.91
FAF1	YIL019W	CAT8	P39113	1433 aa		3.11	□□□□□ -1.91
FAF1	YIL019W	YHR130C	P38834	111 aa		3.11	□□□□□ -1.91
FAF1	YIL019W	YMR103C	Q04436	120 aa		3.11	□□□□□ -1.91
FAF1	YIL019W	YLR194C	Q05777	254 aa		3.11	□□□□□ -1.91
FAF1	YIL019W	HPA2	Q06592	156 aa		3.11	□□□□□ -1.91
FAF1	YIL019W	YRF1-3	P0CX14	1859 aa		3.1	□□□□□ -1.91
FAF1	YIL019W	YRF1-7	P0CX15	1859 aa		3.1	□□□□□ -1.91
FAF1	YIL019W	YRF1-6	P53819	1859 aa		3.1	□□□□□ -1.91
FAF1	YIL019W	EMP24	P32803	203 aa	Known RBP	3.1	□□□□□ -1.91
FAF1	YIL019W	PAU12	P53343	120 aa		3.1	□□□□□ -1.91
FAF1	YIL019W	YCR075W-A	Q3E830	75 aa		3.1	□□□□□ -1.91
FAF1	YIL019W	ESC1	Q03661	1658 aa	Known RBP	3.1	□□□□□ -1.91
FAF1	YIL019W	YIL014C-A	Q02598	104 aa		3.09	□□□□□ -1.91
FAF1	YIL019W	YMR090W	Q04304	227 aa	Known RBP	3.09	□□□□□ -1.91
FAF1	YIL019W	GEA1	P47102	1408 aa	Predicted RBP	3.09	□□□□□ -1.92
FAF1	YIL019W	SCP1	Q08873	200 aa		3.08	□□□□□ -1.92
FAF1	YIL019W	YPL261C	Q08976	102 aa		3.08	□□□□□ -1.92
FAF1	YIL019W	RSF2	P46974	1380 aa		3.08	□□□□□ -1.92
FAF1	YIL019W	TCB3	Q03640	1545 aa	Known RBP	3.08	□□□□□ -1.92
FAF1	YIL019W	YSF3	P0C074	85 aa	Predicted RBP	3.07	□□□□□ -1.92
FAF1	YIL019W	YJL197C-A	P0C5P0	93 aa		3.07	□□□□□ -1.92
FAF1	YIL019W	YJL009W	P47078	108 aa		3.07	□□□□□ -1.92
FAF1	YIL019W	YGL194C-A	Q2V2P6	80 aa		3.07	□□□□□ -1.92
FAF1	YIL019W	SNU13	P39990	126 aa	Known RBP	3.06	□□□□□ -1.92
FAF1	YIL019W	SLH1	P53327	1967 aa	Known RBP	3.06	□□□□□ -1.92
FAF1	YIL019W	TY1B-DR4	Q07793	1604 aa		3.06	□□□□□ -1.92
FAF1	YIL019W	YOR072W	Q08486	104 aa		3.06	□□□□□ -1.92
FAF1	YIL019W	OST5	Q92316	86 aa		3.06	□□□□□ -1.92
FAF1	YIL019W	ROM2	P51862	1356 aa	Known RBP	3.05	□□□□□ -1.92
FAF1	YIL019W	YER187W	P40102	141 aa		3.04	□□□□□ -1.92
FAF1	YIL019W	LTE1	P07866	1435 aa		3.03	□□□□□ -1.92
FAF1	YIL019W	COA6	Q3E846	104 aa		3.03	□□□□□ -1.92
FAF1	YIL019W	YLR365W	Q7LIF2	110 aa		3.03	□□□□□ -1.92
FAF1	YIL019W	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.03	□□□□□ -1.93
FAF1	YIL019W	RPS22A	P0C0W1	130 aa	Known RBP	3.02	□□□□□ -1.93
FAF1	YIL019W	MGR2	Q02889	113 aa		3.02	□□□□□ -1.93
FAF1	YIL019W	RPS22B	Q3E7Y3	130 aa	Known RBP	3.02	□□□□□ -1.93
FAF1	YIL019W	PDR10	P51533	1564 aa		3.02	□□□□□ -1.93
FAF1	YIL019W	LYS2	P07702	1392 aa		3.01	□□□□□ -1.93
FAF1	YIL019W	UBC4	P15731	148 aa		3.01	□□□□□ -1.93
FAF1	YIL019W	YIL163C	P40448	117 aa		3.01	□□□□□ -1.93
FAF1	YIL019W	GTT1	P40582	234 aa		3.01	□□□□□ -1.93
FAF1	YIL019W	SWC7	Q06707	132 aa		3.01	□□□□□ -1.93
FAF1	YIL019W	SWR1	Q05471	1514 aa		3.01	□□□□□ -1.93
FAF1	YIL019W	FIT3	Q08907	204 aa		3	□□□□□ -1.93
FAF1	YIL019W	YDR029W	Q12111	104 aa		3	□□□□□ -1.93
FAF1	YIL019W	PCC1	Q3E833	88 aa		3	□□□□□ -1.93
FAF1	YIL019W	TY1B-PR2	P0C2J0	1756 aa		3	□□□□□ -1.93
FAF1	YIL019W	KOG1	P38873	1557 aa		3	□□□□□ -1.93
FAF1	YIL019W	YBR013C	P38215	129 aa		2.99	□□□□□ -1.93
FAF1	YIL019W	VMA21	P41806	77 aa		2.99	□□□□□ -1.93
FAF1	YIL019W	MIC27	P50945	234 aa		2.99	□□□□□ -1.93
FAF1	YIL019W	DAD1	Q12248	94 aa		2.99	□□□□□ -1.93
FAF1	YIL019W	YOS1	Q3E834	85 aa		2.99	□□□□□ -1.93
FAF1	YIL019W	RPL37A	P49166	88 aa	Known RBP	2.98	□□□□□ -1.93
FAF1	YIL019W	KSH1	Q8TGJ3	72 aa		2.98	□□□□□ -1.93
FAF1	YIL019W	MIC10	Q96VH5	97 aa		2.98	□□□□□ -1.93
FAF1	YIL019W	EMC5	P40540	141 aa		2.97	□□□□□ -1.93
FAF1	YIL019W	MSL1	P40567	111 aa	Predicted RBP	2.97	□□□□□ -1.93
FAF1	YIL019W	HUR1	P45820	110 aa		2.97	□□□□□ -1.93
FAF1	YIL019W	RPL22B	P56628	122 aa	Known RBP	2.97	□□□□□ -1.93
FAF1	YIL019W	DNA2	P38859	1522 aa		2.97	□□□□□ -1.93
FAF1	YIL019W	PAU2	P32612	120 aa		2.96	□□□□□ -1.94
FAF1	YIL019W	SRX1	P36077	127 aa		2.96	□□□□□ -1.94
FAF1	YIL019W	COX23	P38824	151 aa		2.96	□□□□□ -1.94
FAF1	YIL019W	RPL22A	P05749	121 aa	Known RBP	2.95	□□□□□ -1.94
FAF1	YIL019W	HMRA1	P0CY11	126 aa		2.95	□□□□□ -1.94
FAF1	YIL019W	PAU24	P38155	120 aa		2.95	□□□□□ -1.94
FAF1	YIL019W	SNN1	P48232	102 aa		2.95	□□□□□ -1.94
FAF1	YIL019W	SPT6	P23615	1451 aa	Known RBP	2.95	□□□□□ -1.94
FAF1	YIL019W	BNI1	P41832	1953 aa		2.94	□□□□□ -1.94
FAF1	YIL019W	SRB6	P32570	121 aa		2.94	□□□□□ -1.94
FAF1	YIL019W	POR2	P40478	281 aa		2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 239 ms