RNA–Protein interactions for RNA: YHR051W

COX6, Transcript of Subunit VI of cytochrome c oxidase (Complex IV), yeast

Gene COX6, Length 447 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COX6	YHR051W	MRPL31	P14063	131 aa	Predicted RBP	0.66	□□□□□ -2.3
COX6	YHR051W	YMR321C	Q04898	105 aa		0.66	□□□□□ -2.3
COX6	YHR051W	HPA2	Q06592	156 aa		0.66	□□□□□ -2.3
COX6	YHR051W	YLR307C-A	Q3E825	87 aa		0.66	□□□□□ -2.3
COX6	YHR051W	YLR157W-E	P0CF00	54 aa		0.65	□□□□□ -2.31
COX6	YHR051W	GPI19	Q04082	140 aa		0.65	□□□□□ -2.31
COX6	YHR051W	YLR118C	Q12354	227 aa		0.65	□□□□□ -2.31
COX6	YHR051W	SLO1	Q3E784	85 aa		0.65	□□□□□ -2.31
COX6	YHR051W	EMP24	P32803	203 aa	Known RBP	0.63	□□□□□ -2.31
COX6	YHR051W	SRX1	P36077	127 aa		0.63	□□□□□ -2.31
COX6	YHR051W	SNF11	P38956	169 aa		0.63	□□□□□ -2.31
COX6	YHR051W	ICS3	P47034	131 aa		0.63	□□□□□ -2.31
COX6	YHR051W	AIM11	P87275	137 aa		0.63	□□□□□ -2.31
COX6	YHR051W	YIL014C-A	Q02598	104 aa		0.63	□□□□□ -2.31
COX6	YHR051W	YGR240C-A	Q3E786	66 aa		0.63	□□□□□ -2.31
COX6	YHR051W	YLR099W-A	Q3E798	87 aa		0.63	□□□□□ -2.31
COX6	YHR051W	ENV10	Q99382	181 aa		0.63	□□□□□ -2.31
COX6	YHR051W	YPK9	Q12697	1472 aa		0.62	□□□□□ -2.31
COX6	YHR051W	RPL22A	P05749	121 aa	Known RBP	0.62	□□□□□ -2.31
COX6	YHR051W	VMA7	P39111	118 aa		0.62	□□□□□ -2.31
COX6	YHR051W	SPC24	Q04477	213 aa		0.62	□□□□□ -2.31
COX6	YHR051W	URB1	P34241	1764 aa	Known RBP	0.62	□□□□□ -2.31
COX6	YHR051W	YFR035C	P43608	114 aa		0.61	□□□□□ -2.31
COX6	YHR051W	OCA6	Q12454	224 aa		0.61	□□□□□ -2.31
COX6	YHR051W	DNA2	P38859	1522 aa		0.6	□□□□□ -2.31
COX6	YHR051W	YHR130C	P38834	111 aa		0.6	□□□□□ -2.31
COX6	YHR051W	TDA2	P40045	126 aa		0.6	□□□□□ -2.31
COX6	YHR051W	POR2	P40478	281 aa		0.6	□□□□□ -2.31
COX6	YHR051W	YJR128W	P47162	119 aa		0.6	□□□□□ -2.31
COX6	YHR051W	PAU12	P53343	120 aa		0.6	□□□□□ -2.31
COX6	YHR051W	YPL261C	Q08976	102 aa		0.6	□□□□□ -2.31
COX6	YHR051W	YGL041C-B	Q3E750	60 aa		0.6	□□□□□ -2.31
COX6	YHR051W	OST5	Q92316	86 aa		0.6	□□□□□ -2.31
COX6	YHR051W	RPB11	P38902	120 aa		0.59	□□□□□ -2.31
COX6	YHR051W	FRQ1	Q06389	190 aa		0.59	□□□□□ -2.31
COX6	YHR051W	YOR097C	Q12274	175 aa	Predicted RBP	0.59	□□□□□ -2.31
COX6	YHR051W	YRF1-6	P53819	1859 aa		0.57	□□□□□ -2.32
COX6	YHR051W	YCR099C	P25657	155 aa		0.57	□□□□□ -2.32
COX6	YHR051W	COX23	P38824	151 aa		0.57	□□□□□ -2.32
COX6	YHR051W	YAR029W	P39549	74 aa		0.57	□□□□□ -2.32
COX6	YHR051W	YER187W	P40102	141 aa		0.57	□□□□□ -2.32
COX6	YHR051W	YLR285C-A	Q3E771	56 aa		0.57	□□□□□ -2.32
COX6	YHR051W	PCC1	Q3E833	88 aa		0.57	□□□□□ -2.32
COX6	YHR051W	URA2	P07259	2214 aa	Known RBP	0.57	□□□□□ -2.32
COX6	YHR051W	CYB5	P40312	120 aa		0.56	□□□□□ -2.32
COX6	YHR051W	YIR020C	P40575	100 aa		0.56	□□□□□ -2.32
COX6	YHR051W	LCL1	Q02786	101 aa		0.56	□□□□□ -2.32
COX6	YHR051W	WIP1	Q2V2P8	89 aa		0.56	□□□□□ -2.32
COX6	YHR051W	SEC16	P48415	2195 aa	Known RBP	0.56	□□□□□ -2.32
COX6	YHR051W	RPO41	P13433	1351 aa	Known RBP	0.56	□□□□□ -2.32
COX6	YHR051W	YEA6	P39953	335 aa		0.55	□□□□□ -2.32
COX6	YHR051W	VPS55	P47111	140 aa		0.55	□□□□□ -2.32
COX6	YHR051W	MRPS12	P53732	153 aa		0.55	□□□□□ -2.32
COX6	YHR051W	RPL22B	P56628	122 aa	Known RBP	0.55	□□□□□ -2.32
COX6	YHR051W	APS2	Q00381	147 aa		0.55	□□□□□ -2.32
COX6	YHR051W	ARL3	Q02804	198 aa		0.55	□□□□□ -2.32
COX6	YHR051W	SNN1	P48232	102 aa		0.54	□□□□□ -2.32
COX6	YHR051W	YLR042C	Q07990	161 aa		0.54	□□□□□ -2.32
COX6	YHR051W	DAD1	Q12248	94 aa		0.54	□□□□□ -2.32
COX6	YHR051W	SNF2	P22082	1703 aa		0.54	□□□□□ -2.32
COX6	YHR051W	ECM5	Q03214	1411 aa		0.54	□□□□□ -2.32
COX6	YHR051W	ADK1	P07170	222 aa	Known RBP	0.53	□□□□□ -2.32
COX6	YHR051W	AUA1	P32450	94 aa		0.53	□□□□□ -2.32
COX6	YHR051W	PAU2	P32612	120 aa		0.53	□□□□□ -2.32
COX6	YHR051W	YIR021W-A	Q3E739	70 aa		0.53	□□□□□ -2.32
COX6	YHR051W	YLR363W-A	Q3E747	85 aa		0.53	□□□□□ -2.32
COX6	YHR051W	PAU24	P38155	120 aa		0.52	□□□□□ -2.33
COX6	YHR051W	PAM16	P42949	149 aa		0.52	□□□□□ -2.33
COX6	YHR051W	RTR2	Q12378	196 aa		0.52	□□□□□ -2.33
COX6	YHR051W	YLR365W	Q7LIF2	110 aa		0.52	□□□□□ -2.33
COX6	YHR051W	SEC7	P11075	2009 aa	Known RBP	0.52	□□□□□ -2.33
COX6	YHR051W	HMRA2	P0CY13	119 aa		0.51	□□□□□ -2.33
COX6	YHR051W	SPP41	P38904	1435 aa		0.51	□□□□□ -2.33
COX6	YHR051W	GTT1	P40582	234 aa		0.51	□□□□□ -2.33
COX6	YHR051W	TY4B-H	P0C2J7	1802 aa		0.5	□□□□□ -2.33
COX6	YHR051W	YDR010C	Q12426	110 aa		0.49	□□□□□ -2.33
COX6	YHR051W	PAU19	P0CE85	124 aa		0.48	□□□□□ -2.33
COX6	YHR051W	PAU3	P25610	124 aa		0.48	□□□□□ -2.33
COX6	YHR051W	YCL048W-A	Q2V2Q2	79 aa		0.48	□□□□□ -2.33
COX6	YHR051W	YLR419W	Q06698	1435 aa	Known RBP	0.47	□□□□□ -2.33
COX6	YHR051W	BNI1	P41832	1953 aa		0.47	□□□□□ -2.33
COX6	YHR051W	YER039C-A	P0CD97	72 aa		0.47	□□□□□ -2.33
COX6	YHR051W	BLM10	P43583	2143 aa		0.46	□□□□□ -2.34
COX6	YHR051W	HUR1	P45820	110 aa		0.46	□□□□□ -2.34
COX6	YHR051W	YLR255C	O13574	117 aa		0.45	□□□□□ -2.34
COX6	YHR051W	RPS29B	P41058	56 aa	Known RBP	0.45	□□□□□ -2.34
COX6	YHR051W	MYO1	P08964	1928 aa		0.44	□□□□□ -2.34
COX6	YHR051W	YOR304C-A	O14468	76 aa		0.44	□□□□□ -2.34
COX6	YHR051W	BUD23	P25627	275 aa	Predicted RBP	0.44	□□□□□ -2.34
COX6	YHR051W	YHR138C	P38841	114 aa	Predicted RBP	0.44	□□□□□ -2.34
COX6	YHR051W	YHR173C	P38864	112 aa		0.44	□□□□□ -2.34
COX6	YHR051W	VMA21	P41806	77 aa		0.44	□□□□□ -2.34
COX6	YHR051W	IMP2	P46972	177 aa		0.44	□□□□□ -2.34
COX6	YHR051W	LSM6	Q06406	86 aa	Known RBP	0.44	□□□□□ -2.34
COX6	YHR051W	BRR2	P32639	2163 aa	Known RBP	0.44	□□□□□ -2.34
COX6	YHR051W	GCV3	P39726	170 aa	Predicted RBP	0.43	□□□□□ -2.34
COX6	YHR051W	YIL086C	P40503	102 aa		0.43	□□□□□ -2.34
COX6	YHR051W	YGR164W	P53291	111 aa		0.43	□□□□□ -2.34
COX6	YHR051W	YDR210W	Q03482	75 aa		0.43	□□□□□ -2.34
COX6	YHR051W	SWC7	Q06707	132 aa		0.43	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 103.6 ms