RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W YER187WP40102 141 aa2.63□□□□□ -1.99
UBC6YER100W TSC11P40061 1430 aa2.62□□□□□ -1.99
UBC6YER100W PCC1Q3E833 88 aa2.62□□□□□ -1.99
UBC6YER100W YGR164WP53291 111 aa2.61□□□□□ -1.99
UBC6YER100W ACC1Q00955 2233 aaKnown RBP2.6□□□□□ -1.99
UBC6YER100W YEA6P39953 335 aa2.6□□□□□ -1.99
UBC6YER100W GTT1P40582 234 aa2.6□□□□□ -1.99
UBC6YER100W SNN1P48232 102 aa2.6□□□□□ -1.99
UBC6YER100W RPL22BP56628 122 aaKnown RBP2.6□□□□□ -1.99
UBC6YER100W YMR103CQ04436 120 aa2.6□□□□□ -1.99
UBC6YER100W ZEO1Q08245 113 aa2.6□□□□□ -1.99
UBC6YER100W CCW12Q12127 133 aa2.6□□□□□ -1.99
UBC6YER100W YCR101CP25607 182 aa2.59□□□□□ -1.99
UBC6YER100W YAR064WP39563 99 aa2.59□□□□□ -1.99
UBC6YER100W UBR2Q07963 1872 aa2.58□□□□□ -2
UBC6YER100W HAP2P06774 265 aa2.58□□□□□ -2
UBC6YER100W YSF3P0C074 85 aaPredicted RBP2.58□□□□□ -2
UBC6YER100W YJL197C-AP0C5P0 93 aa2.58□□□□□ -2
UBC6YER100W CDC39P25655 2108 aaKnown RBP2.58□□□□□ -2
UBC6YER100W PAU2P32612 120 aa2.58□□□□□ -2
UBC6YER100W SRX1P36077 127 aa2.58□□□□□ -2
UBC6YER100W YBR090CP38253 122 aa2.58□□□□□ -2
UBC6YER100W VMA21P41806 77 aa2.57□□□□□ -2
UBC6YER100W YMR007WQ03675 126 aa2.57□□□□□ -2
UBC6YER100W RPL22AP05749 121 aaKnown RBP2.56□□□□□ -2
UBC6YER100W PAU24P38155 120 aa2.56□□□□□ -2
UBC6YER100W COX23P38824 151 aa2.56□□□□□ -2
UBC6YER100W CYB5P40312 120 aa2.56□□□□□ -2
UBC6YER100W YIL163CP40448 117 aa2.56□□□□□ -2
UBC6YER100W YNL122CP53921 115 aaPredicted RBP2.56□□□□□ -2
UBC6YER100W YMR090WQ04304 227 aaKnown RBP2.56□□□□□ -2
UBC6YER100W SWC7Q06707 132 aa2.56□□□□□ -2
UBC6YER100W PAU19P0CE85 124 aa2.55□□□□□ -2
UBC6YER100W YCR001WP25347 104 aa2.55□□□□□ -2
UBC6YER100W PAU3P25610 124 aa2.55□□□□□ -2
UBC6YER100W HUR1P45820 110 aa2.55□□□□□ -2
UBC6YER100W YJL009WP47078 108 aa2.55□□□□□ -2
UBC6YER100W LCL2Q08045 131 aa2.55□□□□□ -2
UBC6YER100W YOR072WQ08486 104 aa2.55□□□□□ -2
UBC6YER100W YIL102CP40488 101 aa2.54□□□□□ -2
UBC6YER100W YLR363W-AQ3E747 85 aa2.54□□□□□ -2
UBC6YER100W YLR285C-AQ3E771 56 aa2.54□□□□□ -2
UBC6YER100W ENV10Q99382 181 aa2.54□□□□□ -2
UBC6YER100W YOL013W-AP0C272 63 aaPredicted RBP2.53□□□□□ -2
UBC6YER100W HMRA2P0CY13 119 aa2.53□□□□□ -2
UBC6YER100W UBC5P15732 148 aa2.53□□□□□ -2
UBC6YER100W BUD23P25627 275 aaPredicted RBP2.53□□□□□ -2
UBC6YER100W MIC27P50945 234 aa2.53□□□□□ -2
UBC6YER100W KRE5P22023 1365 aa2.52□□□□□ -2.01
UBC6YER100W BEM2P39960 2167 aaKnown RBP2.52□□□□□ -2.01
UBC6YER100W YBR013CP38215 129 aa2.52□□□□□ -2.01
UBC6YER100W POR2P40478 281 aa2.52□□□□□ -2.01
UBC6YER100W MIC10Q96VH5 97 aa2.52□□□□□ -2.01
UBC6YER100W BUD4P47136 1447 aa2.51□□□□□ -2.01
UBC6YER100W RPS22AP0C0W1 130 aaKnown RBP2.51□□□□□ -2.01
UBC6YER100W RPS22BQ3E7Y3 130 aaKnown RBP2.51□□□□□ -2.01
UBC6YER100W YOS1Q3E834 85 aa2.51□□□□□ -2.01
UBC6YER100W COA6Q3E846 104 aa2.51□□□□□ -2.01
UBC6YER100W LYS2P07702 1392 aa2.5□□□□□ -2.01
UBC6YER100W YIR020CP40575 100 aa2.49□□□□□ -2.01
UBC6YER100W TOP2P06786 1428 aaKnown RBP2.49□□□□□ -2.01
UBC6YER100W ROM2P51862 1356 aaKnown RBP2.49□□□□□ -2.01
UBC6YER100W UBC4P15731 148 aa2.47□□□□□ -2.01
UBC6YER100W PAU16P35994 123 aa2.47□□□□□ -2.01
UBC6YER100W PAU15P40585 124 aa2.47□□□□□ -2.01
UBC6YER100W MGR2Q02889 113 aa2.47□□□□□ -2.01
UBC6YER100W PDR11P40550 1411 aa2.46□□□□□ -2.02
UBC6YER100W SRB6P32570 121 aa2.46□□□□□ -2.02
UBC6YER100W MVB12P42939 101 aa2.46□□□□□ -2.02
UBC6YER100W YGL041C-BQ3E750 60 aa2.46□□□□□ -2.02
UBC6YER100W DNA2P38859 1522 aa2.46□□□□□ -2.02
UBC6YER100W YOR289WQ12012 251 aaPredicted RBP2.44□□□□□ -2.02
UBC6YER100W GSC2P40989 1895 aa2.43□□□□□ -2.02
UBC6YER100W HUA1P40325 198 aa2.43□□□□□ -2.02
UBC6YER100W FIT3Q08907 204 aa2.43□□□□□ -2.02
UBC6YER100W MRPL31P14063 131 aaPredicted RBP2.42□□□□□ -2.02
UBC6YER100W LSM6Q06406 86 aaKnown RBP2.42□□□□□ -2.02
UBC6YER100W GEA1P47102 1408 aaPredicted RBP2.42□□□□□ -2.02
UBC6YER100W GEA2P39993 1459 aaKnown RBP2.41□□□□□ -2.02
UBC6YER100W YHR138CP38841 114 aaPredicted RBP2.41□□□□□ -2.02
UBC6YER100W HHY1P39982 102 aa2.41□□□□□ -2.02
UBC6YER100W ICS3P47034 131 aa2.41□□□□□ -2.02
UBC6YER100W VPS55P47111 140 aa2.41□□□□□ -2.02
UBC6YER100W YGR240C-AQ3E786 66 aa2.41□□□□□ -2.02
UBC6YER100W YMR321CQ04898 105 aa2.4□□□□□ -2.03
UBC6YER100W HUG1Q6Q5K6 68 aa2.4□□□□□ -2.03
UBC6YER100W KSH1Q8TGJ3 72 aa2.4□□□□□ -2.03
UBC6YER100W YCL001W-BQ96VH2 84 aa2.4□□□□□ -2.03
UBC6YER100W SKI3P17883 1432 aaKnown RBP2.39□□□□□ -2.03
UBC6YER100W CAT8P39113 1433 aa2.38□□□□□ -2.03
UBC6YER100W RSM19P53733 91 aaPredicted RBP2.38□□□□□ -2.03
UBC6YER100W MIX14Q04341 121 aa2.37□□□□□ -2.03
UBC6YER100W TY3B-IQ7LHG5 1498 aaKnown RBP2.37□□□□□ -2.03
UBC6YER100W TY1B-HO13535 1793 aa2.36□□□□□ -2.03
UBC6YER100W YOL118CQ08259 102 aa2.36□□□□□ -2.03
UBC6YER100W YCL048W-AQ2V2Q2 79 aa2.36□□□□□ -2.03
UBC6YER100W YHR213W-BQ8TGK1 99 aa2.36□□□□□ -2.03
UBC6YER100W REV3P14284 1504 aa2.36□□□□□ -2.03
UBC6YER100W YLR419WQ06698 1435 aaKnown RBP2.35□□□□□ -2.03
UBC6YER100W EMC5P40540 141 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms