RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C YIL163CP40448 117 aa1.29□□□□□ -2.2
TCA17YEL048C YPL261CQ08976 102 aa1.29□□□□□ -2.2
TCA17YEL048C YOR097CQ12274 175 aaPredicted RBP1.29□□□□□ -2.2
TCA17YEL048C RPO41P13433 1351 aaKnown RBP1.29□□□□□ -2.2
TCA17YEL048C UBR1P19812 1950 aa1.28□□□□□ -2.2
TCA17YEL048C YOR304C-AO14468 76 aa1.28□□□□□ -2.2
TCA17YEL048C RPL22AP05749 121 aaKnown RBP1.28□□□□□ -2.2
TCA17YEL048C MRPL31P14063 131 aaPredicted RBP1.28□□□□□ -2.2
TCA17YEL048C YIL014C-AQ02598 104 aa1.28□□□□□ -2.2
TCA17YEL048C YLR042CQ07990 161 aa1.28□□□□□ -2.2
TCA17YEL048C OST5Q92316 86 aa1.28□□□□□ -2.2
TCA17YEL048C ENV10Q99382 181 aa1.28□□□□□ -2.2
TCA17YEL048C SRX1P36077 127 aa1.27□□□□□ -2.21
TCA17YEL048C PAM16P42949 149 aa1.27□□□□□ -2.21
TCA17YEL048C YMR321CQ04898 105 aa1.27□□□□□ -2.21
TCA17YEL048C DAD1Q12248 94 aa1.27□□□□□ -2.21
TCA17YEL048C ADK1P07170 222 aaKnown RBP1.26□□□□□ -2.21
TCA17YEL048C EMP24P32803 203 aaKnown RBP1.26□□□□□ -2.21
TCA17YEL048C YAR029WP39549 74 aa1.26□□□□□ -2.21
TCA17YEL048C YFR035CP43608 114 aa1.26□□□□□ -2.21
TCA17YEL048C ARL3Q02804 198 aa1.26□□□□□ -2.21
TCA17YEL048C YGL041C-BQ3E750 60 aa1.26□□□□□ -2.21
TCA17YEL048C PCC1Q3E833 88 aa1.26□□□□□ -2.21
TCA17YEL048C RIF1P29539 1916 aa1.25□□□□□ -2.21
TCA17YEL048C YJL197C-AP0C5P0 93 aa1.25□□□□□ -2.21
TCA17YEL048C YHR130CP38834 111 aa1.25□□□□□ -2.21
TCA17YEL048C CYB5P40312 120 aa1.25□□□□□ -2.21
TCA17YEL048C ICS3P47034 131 aa1.25□□□□□ -2.21
TCA17YEL048C YLR363W-AQ3E747 85 aa1.25□□□□□ -2.21
TCA17YEL048C YER187WP40102 141 aa1.24□□□□□ -2.21
TCA17YEL048C SNN1P48232 102 aa1.24□□□□□ -2.21
TCA17YEL048C PAU12P53343 120 aa1.24□□□□□ -2.21
TCA17YEL048C RPL22BP56628 122 aaKnown RBP1.24□□□□□ -2.21
TCA17YEL048C POR2P40478 281 aa1.23□□□□□ -2.21
TCA17YEL048C GTT1P40582 234 aa1.23□□□□□ -2.21
TCA17YEL048C OCA6Q12454 224 aa1.23□□□□□ -2.21
TCA17YEL048C YGR240C-AQ3E786 66 aa1.23□□□□□ -2.21
TCA17YEL048C ECM5Q03214 1411 aa1.23□□□□□ -2.21
TCA17YEL048C CDC39P25655 2108 aaKnown RBP1.22□□□□□ -2.21
TCA17YEL048C RUB1Q03919 77 aa1.22□□□□□ -2.21
TCA17YEL048C YLR285C-AQ3E771 56 aa1.22□□□□□ -2.21
TCA17YEL048C YLR365WQ7LIF2 110 aa1.22□□□□□ -2.21
TCA17YEL048C SLH1P53327 1967 aaKnown RBP1.21□□□□□ -2.22
TCA17YEL048C RPL43AP0CX25 92 aaKnown RBP1.21□□□□□ -2.22
TCA17YEL048C RPL43BP0CX26 92 aa1.21□□□□□ -2.22
TCA17YEL048C COX23P38824 151 aa1.21□□□□□ -2.22
TCA17YEL048C SPP41P38904 1435 aa1.2□□□□□ -2.22
TCA17YEL048C HFA1P32874 2273 aa1.19□□□□□ -2.22
TCA17YEL048C VMA21P41806 77 aa1.19□□□□□ -2.22
TCA17YEL048C YOR034C-AQ3E735 80 aa1.19□□□□□ -2.22
TCA17YEL048C HMRA2P0CY13 119 aa1.18□□□□□ -2.22
TCA17YEL048C YJR128WP47162 119 aa1.18□□□□□ -2.22
TCA17YEL048C SWC7Q06707 132 aa1.18□□□□□ -2.22
TCA17YEL048C PAU24P38155 120 aa1.17□□□□□ -2.22
TCA17YEL048C VPS55P47111 140 aa1.17□□□□□ -2.22
TCA17YEL048C YER039C-AP0CD97 72 aa1.16□□□□□ -2.22
TCA17YEL048C PAU19P0CE85 124 aa1.16□□□□□ -2.22
TCA17YEL048C PAU3P25610 124 aa1.16□□□□□ -2.22
TCA17YEL048C PAU2P32612 120 aa1.16□□□□□ -2.22
TCA17YEL048C HUR1P45820 110 aa1.16□□□□□ -2.22
TCA17YEL048C SRB6P32570 121 aa1.15□□□□□ -2.23
TCA17YEL048C LHP1P33399 275 aaKnown RBP1.15□□□□□ -2.23
TCA17YEL048C YIR020CP40575 100 aa1.15□□□□□ -2.23
TCA17YEL048C YGR164WP53291 111 aa1.15□□□□□ -2.23
TCA17YEL048C YPK9Q12697 1472 aa1.15□□□□□ -2.23
TCA17YEL048C YEA6P39953 335 aa1.14□□□□□ -2.23
TCA17YEL048C GNA1P43577 159 aaPredicted RBP1.14□□□□□ -2.23
TCA17YEL048C YCL048W-AQ2V2Q2 79 aa1.14□□□□□ -2.23
TCA17YEL048C YLR307C-AQ3E825 87 aa1.14□□□□□ -2.23
TCA17YEL048C YLR157W-EP0CF00 54 aa1.13□□□□□ -2.23
TCA17YEL048C YER137CP40083 148 aaKnown RBP1.13□□□□□ -2.23
TCA17YEL048C RPS12P48589 143 aaKnown RBP1.13□□□□□ -2.23
TCA17YEL048C LCL1Q02786 101 aa1.13□□□□□ -2.23
TCA17YEL048C LSM6Q06406 86 aaKnown RBP1.13□□□□□ -2.23
TCA17YEL048C DNA2P38859 1522 aa1.13□□□□□ -2.23
TCA17YEL048C YHR138CP38841 114 aaPredicted RBP1.12□□□□□ -2.23
TCA17YEL048C RGI1P40043 161 aaPredicted RBP1.12□□□□□ -2.23
TCA17YEL048C BUD23P25627 275 aaPredicted RBP1.1□□□□□ -2.23
TCA17YEL048C PAU15P40585 124 aa1.1□□□□□ -2.23
TCA17YEL048C YOL118CQ08259 102 aa1.1□□□□□ -2.23
TCA17YEL048C YOS1Q3E834 85 aa1.1□□□□□ -2.23
TCA17YEL048C PAU16P35994 123 aa1.09□□□□□ -2.23
TCA17YEL048C YMR090WQ04304 227 aaKnown RBP1.09□□□□□ -2.23
TCA17YEL048C YMR103CQ04436 120 aa1.09□□□□□ -2.23
TCA17YEL048C MRPS12P53732 153 aa1.08□□□□□ -2.24
TCA17YEL048C TY4B-JP47024 1803 aa1.08□□□□□ -2.24
TCA17YEL048C MDS3P53094 1487 aa1.07□□□□□ -2.24
TCA17YEL048C IMP2P46972 177 aa1.07□□□□□ -2.24
TCA17YEL048C YBR090CP38253 122 aa1.06□□□□□ -2.24
TCA17YEL048C MIC10Q96VH5 97 aa1.06□□□□□ -2.24
TCA17YEL048C LYS2P07702 1392 aa1.06□□□□□ -2.24
TCA17YEL048C FYV7Q12247 151 aa1.05□□□□□ -2.24
TCA17YEL048C TSC11P40061 1430 aa1.05□□□□□ -2.24
TCA17YEL048C YCR101CP25607 182 aa1.04□□□□□ -2.24
TCA17YEL048C YHR173CP38864 112 aa1.04□□□□□ -2.24
TCA17YEL048C YBR072C-AQ3E794 53 aa1.04□□□□□ -2.24
TCA17YEL048C YLR419WQ06698 1435 aaKnown RBP1.04□□□□□ -2.24
TCA17YEL048C UBC4P15731 148 aa1.03□□□□□ -2.24
TCA17YEL048C YPL038W-AQ3E7B4 63 aa1.03□□□□□ -2.24
TCA17YEL048C GSC2P40989 1895 aa1.03□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 101.6 ms