RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	AIM34	Q03673	198 aa		3.01	□□□□□ -1.93
SIR2	YDL042C	YLR361C-A	Q3E795	98 aa		3.01	□□□□□ -1.93
SIR2	YDL042C	HYM1	P32464	399 aa		3	□□□□□ -1.93
SIR2	YDL042C	YKL102C	P34249	101 aa		3	□□□□□ -1.93
SIR2	YDL042C	ECM31	P38122	312 aa		3	□□□□□ -1.93
SIR2	YDL042C	FCY1	Q12178	158 aa		3	□□□□□ -1.93
SIR2	YDL042C	ROX3	P25046	220 aa		2.99	□□□□□ -1.93
SIR2	YDL042C	YKR045C	P36138	183 aa		2.99	□□□□□ -1.93
SIR2	YDL042C	DYN2	Q02647	92 aa		2.99	□□□□□ -1.93
SIR2	YDL042C	DGA1	Q08650	418 aa		2.99	□□□□□ -1.93
SIR2	YDL042C	HUG1	Q6Q5K6	68 aa		2.99	□□□□□ -1.93
SIR2	YDL042C	YLR236C	A0A023PZG4	107 aa		2.98	□□□□□ -1.93
SIR2	YDL042C	YCR023C	P25351	611 aa		2.98	□□□□□ -1.93
SIR2	YDL042C	SKI6	P46948	246 aa	Predicted RBP	2.98	□□□□□ -1.93
SIR2	YDL042C	ARO8	P53090	500 aa	Known RBP	2.98	□□□□□ -1.93
SIR2	YDL042C	POP3	P53833	195 aa	Predicted RBP	2.98	□□□□□ -1.93
SIR2	YDL042C	THI74	Q04083	370 aa		2.98	□□□□□ -1.93
SIR2	YDL042C	ANT1	Q06497	328 aa		2.98	□□□□□ -1.93
SIR2	YDL042C	SCP1	Q08873	200 aa		2.98	□□□□□ -1.93
SIR2	YDL042C	WIP1	Q2V2P8	89 aa		2.98	□□□□□ -1.93
SIR2	YDL042C	FIP1	P45976	327 aa		2.98	□□□□□ -1.93
SIR2	YDL042C	PKR1	Q03880	122 aa	Known RBP	2.98	□□□□□ -1.93
SIR2	YDL042C	YLR162W	Q06235	118 aa		2.98	□□□□□ -1.93
SIR2	YDL042C	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.98	□□□□□ -1.93
SIR2	YDL042C	SPS2	P08459	502 aa		2.97	□□□□□ -1.93
SIR2	YDL042C	PHO85	P17157	305 aa		2.97	□□□□□ -1.93
SIR2	YDL042C	YEA4	P40004	342 aa		2.97	□□□□□ -1.93
SIR2	YDL042C	KNH1	P50112	268 aa		2.97	□□□□□ -1.93
SIR2	YDL042C	UBC12	P52491	188 aa		2.97	□□□□□ -1.93
SIR2	YDL042C	HRD1	Q08109	551 aa		2.97	□□□□□ -1.93
SIR2	YDL042C	PAN3	P36102	679 aa	Predicted RBP	2.96	□□□□□ -1.94
SIR2	YDL042C	YOS1	Q3E834	85 aa		2.96	□□□□□ -1.94
SIR2	YDL042C	POR1	P04840	283 aa	Known RBP	2.95	□□□□□ -1.94
SIR2	YDL042C	SLM6	P38343	150 aa		2.95	□□□□□ -1.94
SIR2	YDL042C	YGR035W-A	Q45U48	73 aa		2.95	□□□□□ -1.94
SIR2	YDL042C	MPC3	P53311	146 aa		2.95	□□□□□ -1.94
SIR2	YDL042C	PLP1	Q04004	230 aa		2.95	□□□□□ -1.94
SIR2	YDL042C	CUE4	Q04201	117 aa	Predicted RBP	2.95	□□□□□ -1.94
SIR2	YDL042C	YBR242W	P38331	238 aa		2.94	□□□□□ -1.94
SIR2	YDL042C	VPS55	P47111	140 aa		2.94	□□□□□ -1.94
SIR2	YDL042C	UBC7	Q02159	165 aa		2.94	□□□□□ -1.94
SIR2	YDL042C	VPS71	Q03433	280 aa		2.94	□□□□□ -1.94
SIR2	YDL042C	FRQ1	Q06389	190 aa		2.94	□□□□□ -1.94
SIR2	YDL042C	STF2	P16965	84 aa		2.93	□□□□□ -1.94
SIR2	YDL042C	MRS4	P23500	304 aa		2.93	□□□□□ -1.94
SIR2	YDL042C	YGL010W	P25338	174 aa		2.93	□□□□□ -1.94
SIR2	YDL042C	YHR138C	P38841	114 aa	Predicted RBP	2.93	□□□□□ -1.94
SIR2	YDL042C	YER134C	P40081	178 aa		2.93	□□□□□ -1.94
SIR2	YDL042C	EST3	Q03096	181 aa		2.93	□□□□□ -1.94
SIR2	YDL042C	RAV2	Q03956	351 aa		2.93	□□□□□ -1.94
SIR2	YDL042C	HOR7	Q05827	59 aa		2.93	□□□□□ -1.94
SIR2	YDL042C	RAD28	Q12021	506 aa		2.93	□□□□□ -1.94
SIR2	YDL042C	SPO13	P23624	291 aa		2.92	□□□□□ -1.94
SIR2	YDL042C	MRP17	P28778	131 aa		2.92	□□□□□ -1.94
SIR2	YDL042C	LST8	P41318	303 aa		2.92	□□□□□ -1.94
SIR2	YDL042C	YOL014W	Q08110	124 aa		2.92	□□□□□ -1.94
SIR2	YDL042C	YGL258W-A	Q3E740	77 aa		2.92	□□□□□ -1.94
SIR2	YDL042C	VPS28	Q02767	242 aa		2.92	□□□□□ -1.94
SIR2	YDL042C	ARL3	Q02804	198 aa		2.92	□□□□□ -1.94
SIR2	YDL042C	SLO1	Q3E784	85 aa		2.92	□□□□□ -1.94
SIR2	YDL042C	YML100W-A	Q8TGT0	57 aa		2.92	□□□□□ -1.94
SIR2	YDL042C	MDN1	Q12019	4910 aa	Known RBP	2.91	□□□□□ -1.94
SIR2	YDL042C	YAR023C	D6VPM8	179 aa		2.91	□□□□□ -1.94
SIR2	YDL042C	PBI2	P0CT04	75 aa	Known RBP	2.91	□□□□□ -1.94
SIR2	YDL042C	YHR212W-A	P0CX91	67 aa		2.91	□□□□□ -1.94
SIR2	YDL042C	RPL13B	P40212	199 aa	Known RBP	2.91	□□□□□ -1.94
SIR2	YDL042C	RFC2	P40348	353 aa		2.91	□□□□□ -1.94
SIR2	YDL042C	YJR015W	P47090	510 aa		2.91	□□□□□ -1.94
SIR2	YDL042C	YHP1	Q04116	353 aa		2.91	□□□□□ -1.94
SIR2	YDL042C	SHH4	Q06236	168 aa		2.91	□□□□□ -1.94
SIR2	YDL042C	IRC23	Q08416	157 aa		2.91	□□□□□ -1.94
SIR2	YDL042C	RPL13A	Q12690	199 aa	Predicted RBP	2.91	□□□□□ -1.94
SIR2	YDL042C	COA2	Q3E823	68 aa		2.91	□□□□□ -1.94
SIR2	YDL042C	YOR304C-A	O14468	76 aa		2.9	□□□□□ -1.95
SIR2	YDL042C	SEC11	P15367	167 aa		2.9	□□□□□ -1.95
SIR2	YDL042C	MRPL38	P35996	138 aa	Predicted RBP	2.9	□□□□□ -1.95
SIR2	YDL042C	YPT31	P38555	223 aa	Known RBP	2.9	□□□□□ -1.95
SIR2	YDL042C	SDH7	Q04401	133 aa		2.9	□□□□□ -1.95
SIR2	YDL042C	YMR320W	Q04897	101 aa		2.9	□□□□□ -1.95
SIR2	YDL042C	GSP1	P32835	219 aa	Known RBP	2.89	□□□□□ -1.95
SIR2	YDL042C	GSP2	P32836	220 aa	Known RBP	2.89	□□□□□ -1.95
SIR2	YDL042C	GLC8	P41818	229 aa		2.89	□□□□□ -1.95
SIR2	YDL042C	TDA4	P47153	279 aa		2.89	□□□□□ -1.95
SIR2	YDL042C	UBI4	P0CG63	381 aa	Known RBP	2.88	□□□□□ -1.95
SIR2	YDL042C	NSA2	P40078	261 aa	Known RBP	2.88	□□□□□ -1.95
SIR2	YDL042C	RUB1	Q03919	77 aa		2.88	□□□□□ -1.95
SIR2	YDL042C	RRT7	Q07829	113 aa		2.88	□□□□□ -1.95
SIR2	YDL042C	PRM3	Q08931	133 aa		2.88	□□□□□ -1.95
SIR2	YDL042C	RPL2A	P0CX45	254 aa	Known RBP	2.88	□□□□□ -1.95
SIR2	YDL042C	RPL2B	P0CX46	254 aa	Known RBP	2.88	□□□□□ -1.95
SIR2	YDL042C	FPR2	P32472	135 aa		2.88	□□□□□ -1.95
SIR2	YDL042C	UGX2	P32772	223 aa		2.88	□□□□□ -1.95
SIR2	YDL042C	YEA6	P39953	335 aa		2.88	□□□□□ -1.95
SIR2	YDL042C	YMR295C	Q03559	197 aa		2.88	□□□□□ -1.95
SIR2	YDL042C	YMR082C	Q04276	118 aa		2.88	□□□□□ -1.95
SIR2	YDL042C	YPR013C	Q12145	317 aa		2.88	□□□□□ -1.95
SIR2	YDL042C	POC4	Q12245	148 aa	Predicted RBP	2.88	□□□□□ -1.95
SIR2	YDL042C	FYV7	Q12247	151 aa		2.88	□□□□□ -1.95
SIR2	YDL042C	ATP14	Q12349	124 aa		2.88	□□□□□ -1.95
SIR2	YDL042C	CSH1	P38287	376 aa		2.87	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms