RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C TOR2P32600 2474 aaKnown RBP1.24□□□□□ -2.21
SRD1YCR018C CUP1-1P0CX80 61 aa1.24□□□□□ -2.21
SRD1YCR018C CUP1-2P0CX81 61 aa1.24□□□□□ -2.21
SRD1YCR018C SRP21P32342 167 aa1.24□□□□□ -2.21
SRD1YCR018C YAR064WP39563 99 aa1.24□□□□□ -2.21
SRD1YCR018C IRC19Q07843 230 aa1.24□□□□□ -2.21
SRD1YCR018C LDB18Q07887 179 aa1.24□□□□□ -2.21
SRD1YCR018C RIF1P29539 1916 aa1.24□□□□□ -2.21
SRD1YCR018C NUM1Q00402 2748 aa1.24□□□□□ -2.21
SRD1YCR018C YBR056W-AI2HB52 66 aa1.23□□□□□ -2.21
SRD1YCR018C DDR48P18899 430 aaKnown RBP1.23□□□□□ -2.21
SRD1YCR018C YCR099CP25657 155 aa1.23□□□□□ -2.21
SRD1YCR018C CYC2P38909 366 aa1.23□□□□□ -2.21
SRD1YCR018C GPI2P46961 280 aa1.23□□□□□ -2.21
SRD1YCR018C YDC1Q02896 317 aa1.23□□□□□ -2.21
SRD1YCR018C YPR153WQ06537 140 aa1.23□□□□□ -2.21
SRD1YCR018C CMC4Q3E7A9 73 aa1.23□□□□□ -2.21
SRD1YCR018C IRA2P19158 3079 aa1.22□□□□□ -2.21
SRD1YCR018C HSP12P22943 109 aaKnown RBP1.22□□□□□ -2.21
SRD1YCR018C HYP2P23301 157 aaKnown RBP1.22□□□□□ -2.21
SRD1YCR018C IPT1P38954 527 aa1.22□□□□□ -2.21
SRD1YCR018C YIL102CP40488 101 aa1.22□□□□□ -2.21
SRD1YCR018C GLC8P41818 229 aa1.22□□□□□ -2.21
SRD1YCR018C LSM1P47017 172 aaKnown RBP1.22□□□□□ -2.21
SRD1YCR018C YDR366CP87287 132 aa1.22□□□□□ -2.21
SRD1YCR018C YIL046W-AQ3E7Z4 54 aa1.22□□□□□ -2.21
SRD1YCR018C SCS22Q6Q595 175 aa1.22□□□□□ -2.21
SRD1YCR018C FMP27Q06179 2628 aa1.22□□□□□ -2.21
SRD1YCR018C IRA1P18963 3092 aa1.21□□□□□ -2.21
SRD1YCR018C YBR027CP38220 110 aa1.21□□□□□ -2.22
SRD1YCR018C CSN9Q03981 162 aa1.21□□□□□ -2.22
SRD1YCR018C LAA1P39526 2014 aa1.2□□□□□ -2.22
SRD1YCR018C SUI1P32911 108 aaKnown RBP1.2□□□□□ -2.22
SRD1YCR018C GIM4P40005 111 aaKnown RBP1.2□□□□□ -2.22
SRD1YCR018C SMX2P40204 77 aaKnown RBP1.2□□□□□ -2.22
SRD1YCR018C GTT2Q12390 233 aa1.2□□□□□ -2.22
SRD1YCR018C RBL2P48606 106 aaKnown RBP1.19□□□□□ -2.22
SRD1YCR018C HHO1P53551 258 aa1.19□□□□□ -2.22
SRD1YCR018C RPL22BP56628 122 aaKnown RBP1.19□□□□□ -2.22
SRD1YCR018C GPI11Q06636 219 aa1.19□□□□□ -2.22
SRD1YCR018C LCL2Q08045 131 aa1.19□□□□□ -2.22
SRD1YCR018C CCW12Q12127 133 aa1.19□□□□□ -2.22
SRD1YCR018C TRA1P38811 3744 aa1.18□□□□□ -2.22
SRD1YCR018C NHP6AP11632 93 aaKnown RBP1.18□□□□□ -2.22
SRD1YCR018C YIL086CP40503 102 aa1.18□□□□□ -2.22
SRD1YCR018C VMA10P48836 114 aaKnown RBP1.18□□□□□ -2.22
SRD1YCR018C RPL37BP51402 88 aaKnown RBP1.18□□□□□ -2.22
SRD1YCR018C COF1Q03048 143 aaKnown RBP1.18□□□□□ -2.22
SRD1YCR018C NHP10Q03435 203 aa1.18□□□□□ -2.22
SRD1YCR018C YMR320WQ04897 101 aa1.18□□□□□ -2.22
SRD1YCR018C HUT1Q12520 339 aa1.18□□□□□ -2.22
SRD1YCR018C YKL068W-AQ3E826 78 aa1.18□□□□□ -2.22
SRD1YCR018C TOR1P35169 2470 aa1.18□□□□□ -2.22
SRD1YCR018C SLH1P53327 1967 aaKnown RBP1.17□□□□□ -2.22
SRD1YCR018C YBR032WP38223 100 aa1.17□□□□□ -2.22
SRD1YCR018C PHB1P40961 287 aa1.17□□□□□ -2.22
SRD1YCR018C SPG1P50088 95 aa1.17□□□□□ -2.22
SRD1YCR018C YGR039WP53225 103 aa1.17□□□□□ -2.22
SRD1YCR018C SED1Q01589 338 aa1.17□□□□□ -2.22
SRD1YCR018C CSF1Q12150 2958 aa1.17□□□□□ -2.22
SRD1YCR018C NMT1P14743 455 aa1.16□□□□□ -2.22
SRD1YCR018C RPS1AP33442 255 aaKnown RBP1.16□□□□□ -2.22
SRD1YCR018C RPS27AP35997 82 aaKnown RBP1.16□□□□□ -2.22
SRD1YCR018C RPS27BP38711 82 aa1.16□□□□□ -2.22
SRD1YCR018C YGR201CP42936 225 aa1.16□□□□□ -2.22
SRD1YCR018C RAF1Q06891 181 aa1.16□□□□□ -2.22
SRD1YCR018C YKL018C-AQ3E7A7 99 aa1.16□□□□□ -2.22
SRD1YCR018C RPL43AP0CX25 92 aaKnown RBP1.15□□□□□ -2.23
SRD1YCR018C RPL43BP0CX26 92 aa1.15□□□□□ -2.23
SRD1YCR018C RPS1BP23248 255 aaKnown RBP1.15□□□□□ -2.23
SRD1YCR018C YCR001WP25347 104 aa1.15□□□□□ -2.23
SRD1YCR018C RPC19P28000 142 aaKnown RBP1.15□□□□□ -2.23
SRD1YCR018C UGX2P32772 223 aa1.15□□□□□ -2.23
SRD1YCR018C SRL3P36167 246 aa1.15□□□□□ -2.23
SRD1YCR018C DIE2P50076 525 aa1.15□□□□□ -2.23
SRD1YCR018C YNL122CP53921 115 aaPredicted RBP1.15□□□□□ -2.23
SRD1YCR018C TMA23Q03525 211 aa1.15□□□□□ -2.23
SRD1YCR018C YOL131WQ08270 108 aa1.15□□□□□ -2.23
SRD1YCR018C SPC3Q12133 184 aa1.15□□□□□ -2.23
SRD1YCR018C UBR1P19812 1950 aa1.14□□□□□ -2.23
SRD1YCR018C FMP49A0A023PZB3 126 aa1.14□□□□□ -2.23
SRD1YCR018C COX5BP00425 151 aa1.14□□□□□ -2.23
SRD1YCR018C YSF3P0C074 85 aaPredicted RBP1.14□□□□□ -2.23
SRD1YCR018C FYV5P25585 152 aa1.14□□□□□ -2.23
SRD1YCR018C LHP1P33399 275 aaKnown RBP1.14□□□□□ -2.23
SRD1YCR018C RGI1P40043 161 aaPredicted RBP1.14□□□□□ -2.23
SRD1YCR018C HPM1P40481 377 aa1.14□□□□□ -2.23
SRD1YCR018C LSM8P47093 109 aaKnown RBP1.14□□□□□ -2.23
SRD1YCR018C SOM1Q05676 74 aa1.14□□□□□ -2.23
SRD1YCR018C GCN1P33892 2672 aaKnown RBP1.14□□□□□ -2.23
SRD1YCR018C RPL33AP05744 107 aaKnown RBP1.13□□□□□ -2.23
SRD1YCR018C ATG8P38182 117 aaRIP-Chip data1.13□□□□□ -2.23not detected
SRD1YCR018C YCL001W-AP87012 153 aa1.13□□□□□ -2.23
SRD1YCR018C MIX14Q04341 121 aa1.13□□□□□ -2.23
SRD1YCR018C YOR072WQ08486 104 aa1.13□□□□□ -2.23
SRD1YCR018C YOL013W-AP0C272 63 aaPredicted RBP1.12□□□□□ -2.23
SRD1YCR018C YHR140WP38842 239 aa1.12□□□□□ -2.23
SRD1YCR018C RPS12P48589 143 aaKnown RBP1.12□□□□□ -2.23
SRD1YCR018C NCE101Q02820 53 aa1.12□□□□□ -2.23
SRD1YCR018C AIM36Q03798 255 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms