RNA–Protein interactions for RNA: YBR081C

SPT7, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeast

Gene SPT7, Length 3,999 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT7	YBR081C	ENV10	Q99382	181 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	Q0297	Q9ZZV8	51 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	YKR070W	P36151	352 aa	Known RBP	0.88	□□□□□ -2.27
SPT7	YBR081C	ATG8	P38182	117 aa	RIP-Chip data	0.88	□□□□□ -2.27	not detected
SPT7	YBR081C	RRT13	P40042	185 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	DFG10	P40526	253 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	YAR1	P46683	200 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	DSK2	P48510	373 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	YDR042C	Q03205	200 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	PBA1	Q05778	276 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	YPL257W	Q08974	193 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	FOL3	Q12676	427 aa	Predicted RBP	0.88	□□□□□ -2.27
SPT7	YBR081C	YPL229W	Q99395	206 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	MRPL44	P19956	98 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	NTF2	P33331	125 aa	Known RBP	0.88	□□□□□ -2.27
SPT7	YBR081C	TIR2	P33890	251 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	APS1	P35181	156 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	RPA43	P46669	326 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	KNH1	P50112	268 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	SAE3	P89114	91 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	BET5	Q03630	159 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	FCY1	Q12178	158 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	ISD11	Q6Q560	94 aa		0.88	□□□□□ -2.27
SPT7	YBR081C	SEC4	P07560	215 aa	Known RBP	0.87	□□□□□ -2.27
SPT7	YBR081C	MRPL31	P14063	131 aa	Predicted RBP	0.87	□□□□□ -2.27
SPT7	YBR081C	YCR025C	P25352	136 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	AGA2	P32781	87 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	KTI12	P34253	313 aa	Known RBP	0.87	□□□□□ -2.27
SPT7	YBR081C	COX14	P39103	70 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	CDC40	P40968	455 aa	Predicted RBP	0.87	□□□□□ -2.27
SPT7	YBR081C	YFR045W	P43617	309 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	TAD2	P47058	250 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	SNN1	P48232	102 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	ERV25	P54837	211 aa	Known RBP	0.87	□□□□□ -2.27
SPT7	YBR081C	MRPS8	Q03799	155 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	CSM4	Q08955	156 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	YMR122W-A	Q3E842	84 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	YMR105W-A	Q8TGS8	64 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	MBF1	O14467	151 aa	Known RBP	0.87	□□□□□ -2.27
SPT7	YBR081C	RPL29	P05747	59 aa	Predicted RBP	0.87	□□□□□ -2.27
SPT7	YBR081C	FUN14	P18411	198 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	YCR085W	P25650	117 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	ECM14	P38836	430 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	MTC6	P38849	526 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	CIN5	P40917	295 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	YFR054C	P43622	192 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	IMP2	P46972	177 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	TOS8	P53147	276 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	YNL190W	P53872	204 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	YMR253C	Q04835	414 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	YOR008C-A	Q3E7B9	74 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	IGO2	Q9P305	131 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	YHR213W	P0CI67	198 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	HYP2	P23301	157 aa	Known RBP	0.87	□□□□□ -2.27
SPT7	YBR081C	YCR023C	P25351	611 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	YCL042W	P25572	119 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	RPL16B	P26785	198 aa	Known RBP	0.87	□□□□□ -2.27
SPT7	YBR081C	RNP1	P32385	249 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	KRE9	P39005	276 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	YIL012W	P40551	113 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	MSL1	P40567	111 aa	Predicted RBP	0.87	□□□□□ -2.27
SPT7	YBR081C	YFR057W	P43625	151 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	YJR111C	P47148	283 aa	Known RBP	0.87	□□□□□ -2.27
SPT7	YBR081C	COX12	Q01519	83 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	GRX5	Q02784	150 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	VPS71	Q03433	280 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	FCF1	Q05498	189 aa	Predicted RBP	0.87	□□□□□ -2.27
SPT7	YBR081C	YLR307C-A	Q3E825	87 aa		0.87	□□□□□ -2.27
SPT7	YBR081C	RAD6	P06104	172 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	CPR1	P14832	162 aa	Known RBP	0.86	□□□□□ -2.27
SPT7	YBR081C	CUP2	P15315	225 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	ANB1	P19211	157 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	COX10	P21592	462 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	PRE5	P40302	234 aa	Known RBP	0.86	□□□□□ -2.27
SPT7	YBR081C	VMA21	P41806	77 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	PAM16	P42949	149 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	YFL051C	P43552	160 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	WWM1	P43582	211 aa	Known RBP	0.86	□□□□□ -2.27
SPT7	YBR081C	YJL027C	P47063	138 aa	Predicted RBP	0.86	□□□□□ -2.27
SPT7	YBR081C	YLR296W	Q05898	108 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	COA2	Q3E823	68 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	AGA1	P32323	725 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	YHR130C	P38834	111 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	WSC2	P53832	503 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	RRT7	Q07829	113 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	YCL048W-A	Q2V2Q2	79 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	YOS1	Q3E834	85 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	RTC6	O14464	93 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	GSP1	P32835	219 aa	Known RBP	0.86	□□□□□ -2.27
SPT7	YBR081C	GSP2	P32836	220 aa	Known RBP	0.86	□□□□□ -2.27
SPT7	YBR081C	VMA11	P32842	164 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	MRPL28	P36527	147 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	SVP26	P38869	228 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	YPL073C	P40323	161 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	BNS1	P50084	137 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	DAD4	P69851	72 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	YMR244W	Q04018	355 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	CCH1	P50077	2039 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	YPR117W	Q06116	2489 aa		0.86	□□□□□ -2.27
SPT7	YBR081C	SOD1	P00445	154 aa	Known RBP	0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms