RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	MBB1	P39534	108 aa		3.25	□□□□□ -1.89
PIM1	YBL022C	YER181C	P40097	107 aa		3.25	□□□□□ -1.89
PIM1	YBL022C	SKI6	P46948	246 aa	Predicted RBP	3.25	□□□□□ -1.89
PIM1	YBL022C	GLT1	Q12680	2145 aa	Known RBP	3.25	□□□□□ -1.89
PIM1	YBL022C	RPL30	P14120	105 aa	Known RBP	3.25	□□□□□ -1.89
PIM1	YBL022C	ABF2	Q02486	183 aa		3.25	□□□□□ -1.89
PIM1	YBL022C	YHM2	Q04013	314 aa		3.25	□□□□□ -1.89
PIM1	YBL022C	IRA2	P19158	3079 aa		3.24	□□□□□ -1.89
PIM1	YBL022C	RPL2A	P0CX45	254 aa	Known RBP	3.24	□□□□□ -1.89
PIM1	YBL022C	RPL2B	P0CX46	254 aa	Known RBP	3.24	□□□□□ -1.89
PIM1	YBL022C	YGR039W	P53225	103 aa		3.24	□□□□□ -1.89
PIM1	YBL022C	ECO1	P43605	281 aa		3.24	□□□□□ -1.89
PIM1	YBL022C	FIP1	P45976	327 aa		3.24	□□□□□ -1.89
PIM1	YBL022C	IMP2	P46972	177 aa		3.24	□□□□□ -1.89
PIM1	YBL022C	YHP1	Q04116	353 aa		3.24	□□□□□ -1.89
PIM1	YBL022C	IGO2	Q9P305	131 aa		3.24	□□□□□ -1.89
PIM1	YBL022C	YHR139C-A	O13536	103 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	PFY1	P07274	126 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	HSP150	P32478	413 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	YMR141C	P40211	102 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	OST1	P41543	476 aa	Known RBP	3.23	□□□□□ -1.89
PIM1	YBL022C	APS1	P35181	156 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	LIP2	Q06005	328 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	RXT3	Q07458	294 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	ECM12	O13529	151 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	VPS63	O13549	108 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	YHL042W	P38729	150 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	PAU7	P39545	55 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	CSF1	Q12150	2958 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	TDA8	Q6B2U8	126 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	Q0182	Q9ZZW1	134 aa		3.23	□□□□□ -1.89
PIM1	YBL022C	YIL059C	P40520	121 aa		3.22	□□□□□ -1.89
PIM1	YBL022C	TOS6	P48560	102 aa		3.22	□□□□□ -1.89
PIM1	YBL022C	NIP7	Q08962	181 aa	Known RBP	3.22	□□□□□ -1.89
PIM1	YBL022C	NCE102	Q12207	173 aa	RIP-Chip data	3.22	□□□□□ -1.89	not detected
PIM1	YBL022C	KSH1	Q8TGJ3	72 aa		3.22	□□□□□ -1.89
PIM1	YBL022C	RPS26A	P39938	119 aa	Known RBP	3.22	□□□□□ -1.89
PIM1	YBL022C	YIA6	P40556	373 aa		3.22	□□□□□ -1.89
PIM1	YBL022C	YDR102C	Q03864	110 aa		3.22	□□□□□ -1.89
PIM1	YBL022C	RPB10	P22139	70 aa		3.22	□□□□□ -1.89
PIM1	YBL022C	YIL046W-A	Q3E7Z4	54 aa		3.22	□□□□□ -1.89
PIM1	YBL022C	HTL1	Q9URQ5	78 aa		3.22	□□□□□ -1.89
PIM1	YBL022C	RPS2	P25443	254 aa	Known RBP	3.21	□□□□□ -1.9
PIM1	YBL022C	PCL2	P25693	308 aa		3.21	□□□□□ -1.9
PIM1	YBL022C	YNL217W	P40152	326 aa		3.21	□□□□□ -1.9
PIM1	YBL022C	AIM11	P87275	137 aa		3.21	□□□□□ -1.9
PIM1	YBL022C	FPR1	P20081	114 aa	Known RBP	3.21	□□□□□ -1.9
PIM1	YBL022C	YNL194C	P40169	301 aa		3.21	□□□□□ -1.9
PIM1	YBL022C	MRPL19	P53875	158 aa		3.21	□□□□□ -1.9
PIM1	YBL022C	IRC19	Q07843	230 aa		3.21	□□□□□ -1.9
PIM1	YBL022C	YDR029W	Q12111	104 aa		3.21	□□□□□ -1.9
PIM1	YBL022C	MSA2	P36157	363 aa		3.21	□□□□□ -1.9
PIM1	YBL022C	YHL018W	P38744	120 aa	Predicted RBP	3.21	□□□□□ -1.9
PIM1	YBL022C	GAT4	P40569	121 aa		3.21	□□□□□ -1.9
PIM1	YBL022C	NCA3	P46955	337 aa		3.21	□□□□□ -1.9
PIM1	YBL022C	TDA7	P53882	636 aa	Predicted RBP	3.21	□□□□□ -1.9
PIM1	YBL022C	IRC25	Q07951	179 aa		3.21	□□□□□ -1.9
PIM1	YBL022C	RDL2	Q08742	149 aa	Known RBP	3.21	□□□□□ -1.9
PIM1	YBL022C	RPL42A	P0CX27	106 aa	Known RBP	3.2	□□□□□ -1.9
PIM1	YBL022C	RPL42B	P0CX28	106 aa	Known RBP	3.2	□□□□□ -1.9
PIM1	YBL022C	YCR050C	P25630	102 aa		3.2	□□□□□ -1.9
PIM1	YBL022C	SPC29	P33419	253 aa		3.2	□□□□□ -1.9
PIM1	YBL022C	YGR219W	P53307	113 aa		3.2	□□□□□ -1.9
PIM1	YBL022C	NUM1	Q00402	2748 aa		3.2	□□□□□ -1.9
PIM1	YBL022C	CDC39	P25655	2108 aa	Known RBP	3.2	□□□□□ -1.9
PIM1	YBL022C	MDM35	O60200	86 aa		3.2	□□□□□ -1.9
PIM1	YBL022C	RPS27A	P35997	82 aa	Known RBP	3.2	□□□□□ -1.9
PIM1	YBL022C	RPS27B	P38711	82 aa		3.2	□□□□□ -1.9
PIM1	YBL022C	TIM10	P87108	93 aa		3.2	□□□□□ -1.9
PIM1	YBL022C	UBC4	P15731	148 aa		3.19	□□□□□ -1.9
PIM1	YBL022C	YKR045C	P36138	183 aa		3.19	□□□□□ -1.9
PIM1	YBL022C	GPI19	Q04082	140 aa		3.19	□□□□□ -1.9
PIM1	YBL022C	HHF1	P02309	103 aa	Known RBP	3.18	□□□□□ -1.9
PIM1	YBL022C	TIR2	P33890	251 aa		3.18	□□□□□ -1.9
PIM1	YBL022C	LTP1	P40347	161 aa		3.18	□□□□□ -1.9
PIM1	YBL022C	YFL015C	P43578	164 aa		3.18	□□□□□ -1.9
PIM1	YBL022C	YMR254C	Q04838	102 aa		3.18	□□□□□ -1.9
PIM1	YBL022C	YDL009C	Q12210	107 aa		3.18	□□□□□ -1.9
PIM1	YBL022C	YJL027C	P47063	138 aa	Predicted RBP	3.18	□□□□□ -1.9
PIM1	YBL022C	NAG1	Q8TGN9	163 aa		3.18	□□□□□ -1.9
PIM1	YBL022C	AIM19	P40502	157 aa		3.18	□□□□□ -1.9
PIM1	YBL022C	KNH1	P50112	268 aa		3.18	□□□□□ -1.9
PIM1	YBL022C	YOR029W	Q12243	111 aa		3.18	□□□□□ -1.9
PIM1	YBL022C	YFL051C	P43552	160 aa		3.17	□□□□□ -1.9
PIM1	YBL022C	UBC13	P52490	153 aa		3.17	□□□□□ -1.9
PIM1	YBL022C	MST27	P53176	234 aa		3.17	□□□□□ -1.9
PIM1	YBL022C	KTI11	Q3E840	82 aa		3.17	□□□□□ -1.9
PIM1	YBL022C	SIM1	P40472	476 aa		3.17	□□□□□ -1.9
PIM1	YBL022C	SAP30	P38429	201 aa		3.16	□□□□□ -1.9
PIM1	YBL022C	SWS2	P53937	143 aa		3.16	□□□□□ -1.9
PIM1	YBL022C	PPT2	Q12036	173 aa		3.16	□□□□□ -1.9
PIM1	YBL022C	YDR524C-B	Q3E6R4	66 aa		3.16	□□□□□ -1.9
PIM1	YBL022C	YLR342W-A	Q3E810	57 aa		3.16	□□□□□ -1.9
PIM1	YBL022C	RAD6	P06104	172 aa		3.16	□□□□□ -1.9
PIM1	YBL022C	YPL261C	Q08976	102 aa		3.16	□□□□□ -1.9
PIM1	YBL022C	HSP12	P22943	109 aa	Known RBP	3.16	□□□□□ -1.9
PIM1	YBL022C	VHS2	P40463	436 aa		3.16	□□□□□ -1.9
PIM1	YBL022C	YNL046W	P53956	172 aa		3.16	□□□□□ -1.9
PIM1	YBL022C	RTG1	P32607	177 aa		3.15	□□□□□ -1.9
PIM1	YBL022C	DSE2	P38844	325 aa		3.15	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms