RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 YLR194CQ05777 254 aa2.55□□□□□ -2
NME1NME1 SNF11P38956 169 aa2.54□□□□□ -2
NME1NME1 YMR321CQ04898 105 aa2.53□□□□□ -2
NME1NME1 YJL197C-AP0C5P0 93 aa2.51□□□□□ -2.01
NME1NME1 SPC24Q04477 213 aa2.5□□□□□ -2.01
NME1NME1 YOR034C-AQ3E735 80 aa2.5□□□□□ -2.01
NME1NME1 RPB11P38902 120 aa2.47□□□□□ -2.01
NME1NME1 FRQ1Q06389 190 aa2.47□□□□□ -2.01
NME1NME1 RPL22AP05749 121 aaKnown RBP2.46□□□□□ -2.02
NME1NME1 EMP24P32803 203 aaKnown RBP2.46□□□□□ -2.02
NME1NME1 YIL014C-AQ02598 104 aa2.46□□□□□ -2.02
NME1NME1 SRX1P36077 127 aa2.45□□□□□ -2.02
NME1NME1 ENV10Q99382 181 aa2.45□□□□□ -2.02
NME1NME1 ICS3P47034 131 aa2.44□□□□□ -2.02
NME1NME1 YRF1-3P0CX14 1859 aa2.43□□□□□ -2.02
NME1NME1 YRF1-7P0CX15 1859 aa2.43□□□□□ -2.02
NME1NME1 YFR035CP43608 114 aa2.43□□□□□ -2.02
NME1NME1 YLR307C-AQ3E825 87 aa2.43□□□□□ -2.02
NME1NME1 TDA2P40045 126 aa2.42□□□□□ -2.02
NME1NME1 APS2Q00381 147 aa2.4□□□□□ -2.03
NME1NME1 YPL261CQ08976 102 aa2.4□□□□□ -2.03
NME1NME1 WIP1Q2V2P8 89 aa2.4□□□□□ -2.03
NME1NME1 OST5Q92316 86 aa2.4□□□□□ -2.03
NME1NME1 LAA1P39526 2014 aa2.39□□□□□ -2.03
NME1NME1 YLR157W-EP0CF00 54 aa2.38□□□□□ -2.03
NME1NME1 PAU12P53343 120 aa2.38□□□□□ -2.03
NME1NME1 YOR097CQ12274 175 aaPredicted RBP2.38□□□□□ -2.03
NME1NME1 OCA6Q12454 224 aa2.38□□□□□ -2.03
NME1NME1 YGR240C-AQ3E786 66 aa2.38□□□□□ -2.03
NME1NME1 YCR099CP25657 155 aa2.37□□□□□ -2.03
NME1NME1 YHR130CP38834 111 aa2.36□□□□□ -2.03
NME1NME1 POR2P40478 281 aa2.36□□□□□ -2.03
NME1NME1 YGL041C-BQ3E750 60 aa2.36□□□□□ -2.03
NME1NME1 YJR128WP47162 119 aa2.33□□□□□ -2.04
NME1NME1 PCC1Q3E833 88 aa2.32□□□□□ -2.04
NME1NME1 TY1B-HO13535 1793 aa2.31□□□□□ -2.04
NME1NME1 CYB5P40312 120 aa2.31□□□□□ -2.04
NME1NME1 YLR285C-AQ3E771 56 aa2.3□□□□□ -2.04
NME1NME1 COX23P38824 151 aa2.29□□□□□ -2.04
NME1NME1 YAR029WP39549 74 aa2.29□□□□□ -2.04
NME1NME1 YER187WP40102 141 aa2.29□□□□□ -2.04
NME1NME1 RPL22BP56628 122 aaKnown RBP2.29□□□□□ -2.04
NME1NME1 YLR042CQ07990 161 aa2.27□□□□□ -2.05
NME1NME1 YIR021W-AQ3E739 70 aa2.26□□□□□ -2.05
NME1NME1 RPO41P13433 1351 aaKnown RBP2.25□□□□□ -2.05
NME1NME1 PAM16P42949 149 aa2.25□□□□□ -2.05
NME1NME1 DAD1Q12248 94 aa2.25□□□□□ -2.05
NME1NME1 YPK9Q12697 1472 aa2.25□□□□□ -2.05
NME1NME1 SNN1P48232 102 aa2.23□□□□□ -2.05
NME1NME1 YLR363W-AQ3E747 85 aa2.23□□□□□ -2.05
NME1NME1 LCL1Q02786 101 aa2.22□□□□□ -2.05
NME1NME1 RTR2Q12378 196 aa2.22□□□□□ -2.05
NME1NME1 ARL3Q02804 198 aa2.21□□□□□ -2.06
NME1NME1 ADK1P07170 222 aaKnown RBP2.2□□□□□ -2.06
NME1NME1 YIR020CP40575 100 aa2.2□□□□□ -2.06
NME1NME1 PRP8P33334 2413 aaKnown RBP2.2□□□□□ -2.06
NME1NME1 DNA2P38859 1522 aa2.19□□□□□ -2.06
NME1NME1 YEA6P39953 335 aa2.18□□□□□ -2.06
NME1NME1 GTT1P40582 234 aa2.18□□□□□ -2.06
NME1NME1 YLR365WQ7LIF2 110 aa2.18□□□□□ -2.06
NME1NME1 VPS55P47111 140 aa2.17□□□□□ -2.06
NME1NME1 PAU24P38155 120 aa2.16□□□□□ -2.06
NME1NME1 PAU2P32612 120 aa2.15□□□□□ -2.07
NME1NME1 URA2P07259 2214 aaKnown RBP2.14□□□□□ -2.07
NME1NME1 HMRA2P0CY13 119 aa2.12□□□□□ -2.07
NME1NME1 MRPS12P53732 153 aa2.1□□□□□ -2.07
NME1NME1 ECM5Q03214 1411 aa2.09□□□□□ -2.07
NME1NME1 YOR304C-AO14468 76 aa2.07□□□□□ -2.08
NME1NME1 PAU19P0CE85 124 aa2.06□□□□□ -2.08
NME1NME1 PAU3P25610 124 aa2.06□□□□□ -2.08
NME1NME1 SPP41P38904 1435 aa2.06□□□□□ -2.08
NME1NME1 SEC16P48415 2195 aaKnown RBP2.03□□□□□ -2.08
NME1NME1 YCL048W-AQ2V2Q2 79 aa2.01□□□□□ -2.09
NME1NME1 YER039C-AP0CD97 72 aa2□□□□□ -2.09
NME1NME1 AUA1P32450 94 aa2□□□□□ -2.09
NME1NME1 HUR1P45820 110 aa1.99□□□□□ -2.09
NME1NME1 URB1P34241 1764 aaKnown RBP1.98□□□□□ -2.09
NME1NME1 VMA21P41806 77 aa1.96□□□□□ -2.1
NME1NME1 LSM6Q06406 86 aaKnown RBP1.95□□□□□ -2.1
NME1NME1 SWC7Q06707 132 aa1.95□□□□□ -2.1
NME1NME1 YRF1-6P53819 1859 aa1.94□□□□□ -2.1
NME1NME1 YGR164WP53291 111 aa1.94□□□□□ -2.1
NME1NME1 RUB1Q03919 77 aa1.93□□□□□ -2.1
NME1NME1 YDR010CQ12426 110 aa1.91□□□□□ -2.1
NME1NME1 SEC7P11075 2009 aaKnown RBP1.91□□□□□ -2.1
NME1NME1 YHR138CP38841 114 aaPredicted RBP1.89□□□□□ -2.11
NME1NME1 BUD23P25627 275 aaPredicted RBP1.87□□□□□ -2.11
NME1NME1 YLR419WQ06698 1435 aaKnown RBP1.87□□□□□ -2.11
NME1NME1 YOL118CQ08259 102 aa1.87□□□□□ -2.11
NME1NME1 PAU16P35994 123 aa1.86□□□□□ -2.11
NME1NME1 PAU15P40585 124 aa1.86□□□□□ -2.11
NME1NME1 IMP2P46972 177 aa1.85□□□□□ -2.11
NME1NME1 YBR072C-AQ3E794 53 aa1.85□□□□□ -2.11
NME1NME1 YHR173CP38864 112 aa1.84□□□□□ -2.11
NME1NME1 GNA1P43577 159 aaPredicted RBP1.83□□□□□ -2.12
NME1NME1 BNI1P41832 1953 aa1.82□□□□□ -2.12
NME1NME1 SNF2P22082 1703 aa1.81□□□□□ -2.12
NME1NME1 CCW14O13547 238 aa1.81□□□□□ -2.12
NME1NME1 YLR255CO13574 117 aa1.81□□□□□ -2.12
NME1NME1 LHP1P33399 275 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms