RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W YHR022CP38763 256 aa1.5□□□□□ -2.17
VPS16YPL045W CUE4Q04201 117 aaPredicted RBP1.5□□□□□ -2.17
VPS16YPL045W YPR013CQ12145 317 aa1.5□□□□□ -2.17
VPS16YPL045W GTT2Q12390 233 aa1.5□□□□□ -2.17
VPS16YPL045W FMP27Q06179 2628 aa1.5□□□□□ -2.17
VPS16YPL045W ACC1Q00955 2233 aaKnown RBP1.5□□□□□ -2.17
VPS16YPL045W BRR2P32639 2163 aaKnown RBP1.5□□□□□ -2.17
VPS16YPL045W SEC11P15367 167 aa1.5□□□□□ -2.17
VPS16YPL045W SHB17P36136 271 aaKnown RBP1.5□□□□□ -2.17
VPS16YPL045W SMX2P40204 77 aaKnown RBP1.5□□□□□ -2.17
VPS16YPL045W POP3P53833 195 aaPredicted RBP1.5□□□□□ -2.17
VPS16YPL045W DAD3P69850 94 aa1.5□□□□□ -2.17
VPS16YPL045W LIP1Q03579 150 aa1.5□□□□□ -2.17
VPS16YPL045W HRT1Q08273 121 aa1.5□□□□□ -2.17
VPS16YPL045W ATP14Q12349 124 aa1.5□□□□□ -2.17
VPS16YPL045W TOR2P32600 2474 aaKnown RBP1.49□□□□□ -2.17
VPS16YPL045W YOL162WP0CF19 215 aa1.49□□□□□ -2.17
VPS16YPL045W HSP12P22943 109 aaKnown RBP1.49□□□□□ -2.17
VPS16YPL045W MRS4P23500 304 aa1.49□□□□□ -2.17
VPS16YPL045W ETR1P38071 380 aa1.49□□□□□ -2.17
VPS16YPL045W TRS20P38334 175 aa1.49□□□□□ -2.17
VPS16YPL045W RPS20P38701 121 aaKnown RBP1.49□□□□□ -2.17
VPS16YPL045W AYR1P40471 297 aa1.49□□□□□ -2.17
VPS16YPL045W KNH1P50112 268 aa1.49□□□□□ -2.17
VPS16YPL045W EMC4P53073 190 aa1.49□□□□□ -2.17
VPS16YPL045W CYT2Q00873 224 aa1.49□□□□□ -2.17
VPS16YPL045W EST3Q03096 181 aa1.49□□□□□ -2.17
VPS16YPL045W MIX17Q03667 156 aa1.49□□□□□ -2.17
VPS16YPL045W ANT1Q06497 328 aa1.49□□□□□ -2.17
VPS16YPL045W SPC3Q12133 184 aa1.49□□□□□ -2.17
VPS16YPL045W YOR015WQ12169 119 aa1.49□□□□□ -2.17
VPS16YPL045W WIP1Q2V2P8 89 aa1.49□□□□□ -2.17
VPS16YPL045W SEN1Q00416 2231 aaKnown RBP1.49□□□□□ -2.17
VPS16YPL045W SEN2P16658 377 aa1.49□□□□□ -2.17
VPS16YPL045W SRX1P36077 127 aa1.49□□□□□ -2.17
VPS16YPL045W VMA10P48836 114 aaKnown RBP1.49□□□□□ -2.17
VPS16YPL045W YNR064CP53750 290 aa1.49□□□□□ -2.17
VPS16YPL045W DML1Q03652 475 aa1.49□□□□□ -2.17
VPS16YPL045W HFA1P32874 2273 aa1.48□□□□□ -2.17
VPS16YPL045W MDM35O60200 86 aa1.48□□□□□ -2.17
VPS16YPL045W DDR48P18899 430 aaKnown RBP1.48□□□□□ -2.17
VPS16YPL045W YCR099CP25657 155 aa1.48□□□□□ -2.17
VPS16YPL045W YPT31P38555 223 aaKnown RBP1.48□□□□□ -2.17
VPS16YPL045W YHR140WP38842 239 aa1.48□□□□□ -2.17
VPS16YPL045W ERG25P53045 309 aa1.48□□□□□ -2.17
VPS16YPL045W YPR174CQ06616 221 aaPredicted RBP1.48□□□□□ -2.17
VPS16YPL045W ATG10Q07879 167 aa1.48□□□□□ -2.17
VPS16YPL045W YMR030W-AQ3E760 96 aa1.48□□□□□ -2.17
VPS16YPL045W SLO1Q3E784 85 aa1.48□□□□□ -2.17
VPS16YPL045W YKL068W-AQ3E826 78 aa1.48□□□□□ -2.17
VPS16YPL045W TFC1P32367 649 aa1.48□□□□□ -2.17
VPS16YPL045W SUI1P32911 108 aaKnown RBP1.48□□□□□ -2.17
VPS16YPL045W PEP8P40335 379 aa1.48□□□□□ -2.17
VPS16YPL045W PAC10P48363 199 aa1.48□□□□□ -2.17
VPS16YPL045W THG1P53215 237 aaKnown RBP1.48□□□□□ -2.17
VPS16YPL045W SAY1P53324 424 aa1.48□□□□□ -2.17
VPS16YPL045W YNL019CP53975 284 aa1.48□□□□□ -2.17
VPS16YPL045W DAD4P69851 72 aa1.48□□□□□ -2.17
VPS16YPL045W BUD25P85052 153 aa1.48□□□□□ -2.17
VPS16YPL045W NHP10Q03435 203 aa1.48□□□□□ -2.17
VPS16YPL045W UPS3Q04006 179 aa1.48□□□□□ -2.17
VPS16YPL045W CNL1Q06333 122 aa1.48□□□□□ -2.17
VPS16YPL045W ATG41Q12048 136 aa1.48□□□□□ -2.17
VPS16YPL045W FCY1Q12178 158 aa1.48□□□□□ -2.17
VPS16YPL045W FAS1P07149 2051 aaKnown RBP1.47□□□□□ -2.17
VPS16YPL045W AHT1P29589 182 aa1.47□□□□□ -2.17
VPS16YPL045W GSP2P32836 220 aaKnown RBP1.47□□□□□ -2.17
VPS16YPL045W YBR032WP38223 100 aa1.47□□□□□ -2.17
VPS16YPL045W APS3P47064 194 aa1.47□□□□□ -2.17
VPS16YPL045W GRX5Q02784 150 aa1.47□□□□□ -2.17
VPS16YPL045W YHP1Q04116 353 aa1.47□□□□□ -2.17
VPS16YPL045W UPS1Q05776 175 aa1.47□□□□□ -2.17
VPS16YPL045W PRP11Q07350 266 aaPredicted RBP1.47□□□□□ -2.17
VPS16YPL045W HYM1P32464 399 aa1.47□□□□□ -2.17
VPS16YPL045W RPS1AP33442 255 aaKnown RBP1.47□□□□□ -2.17
VPS16YPL045W YHL018WP38744 120 aaPredicted RBP1.47□□□□□ -2.17
VPS16YPL045W DSE2P38844 325 aa1.47□□□□□ -2.17
VPS16YPL045W NSE4P43124 402 aa1.47□□□□□ -2.17
VPS16YPL045W GEP7P53171 287 aa1.47□□□□□ -2.17
VPS16YPL045W RRT7Q07829 113 aa1.47□□□□□ -2.17
VPS16YPL045W YNL277W-AQ3E7Z0 62 aa1.47□□□□□ -2.17
VPS16YPL045W FMP49A0A023PZB3 126 aa1.46□□□□□ -2.18
VPS16YPL045W COX8P04039 78 aa1.46□□□□□ -2.18
VPS16YPL045W NMT1P14743 455 aa1.46□□□□□ -2.18
VPS16YPL045W MRP49P32388 137 aa1.46□□□□□ -2.18
VPS16YPL045W RPL14AP36105 138 aaKnown RBP1.46□□□□□ -2.18
VPS16YPL045W RPL14BP38754 138 aaKnown RBP1.46□□□□□ -2.18
VPS16YPL045W DAN1P47178 298 aa1.46□□□□□ -2.18
VPS16YPL045W FRQ1Q06389 190 aa1.46□□□□□ -2.18
VPS16YPL045W RPL40AP0CH08 128 aaKnown RBP1.45□□□□□ -2.18
VPS16YPL045W RPL40BP0CH09 128 aaKnown RBP1.45□□□□□ -2.18
VPS16YPL045W INO4P13902 151 aa1.45□□□□□ -2.18
VPS16YPL045W NOP1P15646 327 aaKnown RBP1.45□□□□□ -2.18
VPS16YPL045W MDH2P22133 377 aa1.45□□□□□ -2.18
VPS16YPL045W SDH7Q04401 133 aa1.45□□□□□ -2.18
VPS16YPL045W YDL241WQ07738 123 aa1.45□□□□□ -2.18
VPS16YPL045W CSI2Q08054 341 aa1.45□□□□□ -2.18
VPS16YPL045W UIP4Q08926 304 aa1.45□□□□□ -2.18
VPS16YPL045W Q0144Q9ZZW2 109 aa1.45□□□□□ -2.18
VPS16YPL045W UTR5P32630 166 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 85.1 ms