RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C PIR1Q03178 341 aa3.03□□□□□ -1.92
CIT1YNR001C YMR082CQ04276 118 aa3.03□□□□□ -1.92
CIT1YNR001C HRI1Q05905 244 aaKnown RBP3.03□□□□□ -1.92
CIT1YNR001C YOR186WQ08560 144 aa3.03□□□□□ -1.92
CIT1YNR001C SRL1Q08673 210 aa3.03□□□□□ -1.92
CIT1YNR001C YPL162CQ12042 273 aa3.03□□□□□ -1.92
CIT1YNR001C USB1Q12208 290 aaKnown RBP3.03□□□□□ -1.92
CIT1YNR001C WIP1Q2V2P8 89 aa3.03□□□□□ -1.92
CIT1YNR001C YCL021W-AQ96VH3 125 aa3.03□□□□□ -1.92
CIT1YNR001C STT4P37297 1900 aa3.03□□□□□ -1.92
CIT1YNR001C YOR304C-AO14468 76 aa3.02□□□□□ -1.93
CIT1YNR001C MRS1P07266 363 aa3.02□□□□□ -1.93
CIT1YNR001C DDI2P0CH63 225 aa3.02□□□□□ -1.93
CIT1YNR001C DDI3P0CH64 225 aa3.02□□□□□ -1.93
CIT1YNR001C HMRA1P0CY11 126 aa3.02□□□□□ -1.93
CIT1YNR001C SPT15P13393 240 aaKnown RBP3.02□□□□□ -1.93
CIT1YNR001C SPO13P23624 291 aa3.02□□□□□ -1.93
CIT1YNR001C YCR025CP25352 136 aa3.02□□□□□ -1.93
CIT1YNR001C DOG2P38773 246 aa3.02□□□□□ -1.93
CIT1YNR001C BAT1P38891 393 aaKnown RBP3.02□□□□□ -1.93
CIT1YNR001C TIM17P39515 158 aa3.02□□□□□ -1.93
CIT1YNR001C MSL1P40567 111 aaPredicted RBP3.02□□□□□ -1.93
CIT1YNR001C GPI2P46961 280 aa3.02□□□□□ -1.93
CIT1YNR001C ELC1Q03071 99 aa3.02□□□□□ -1.93
CIT1YNR001C SHH3Q04487 196 aa3.02□□□□□ -1.93
CIT1YNR001C NMA1Q06178 401 aaKnown RBP3.02□□□□□ -1.93
CIT1YNR001C NAT3Q06504 195 aa3.02□□□□□ -1.93
CIT1YNR001C IRC19Q07843 230 aa3.02□□□□□ -1.93
CIT1YNR001C NDD1Q08887 554 aa3.02□□□□□ -1.93
CIT1YNR001C VPS68Q12016 184 aa3.02□□□□□ -1.93
CIT1YNR001C FSF1Q12029 327 aaKnown RBP3.02□□□□□ -1.93
CIT1YNR001C PPT2Q12036 173 aa3.02□□□□□ -1.93
CIT1YNR001C PEX4P29340 183 aa3.02□□□□□ -1.93
CIT1YNR001C ERG2P32352 222 aa3.02□□□□□ -1.93
CIT1YNR001C GSP1P32835 219 aaKnown RBP3.02□□□□□ -1.93
CIT1YNR001C YHR138CP38841 114 aaPredicted RBP3.02□□□□□ -1.93
CIT1YNR001C YER076CP40049 302 aa3.02□□□□□ -1.93
CIT1YNR001C YNL046WP53956 172 aa3.02□□□□□ -1.93
CIT1YNR001C INP1Q03694 420 aa3.02□□□□□ -1.93
CIT1YNR001C RIM9Q04734 239 aa3.02□□□□□ -1.93
CIT1YNR001C RFU1Q08003 200 aa3.02□□□□□ -1.93
CIT1YNR001C CUP2P15315 225 aa3.01□□□□□ -1.93
CIT1YNR001C YBR220CP38318 560 aa3.01□□□□□ -1.93
CIT1YNR001C TEM1P38987 245 aa3.01□□□□□ -1.93
CIT1YNR001C PEX17P40155 199 aa3.01□□□□□ -1.93
CIT1YNR001C MOB1P40484 314 aa3.01□□□□□ -1.93
CIT1YNR001C EMC4P53073 190 aa3.01□□□□□ -1.93
CIT1YNR001C SWT21P53873 357 aaPredicted RBP3.01□□□□□ -1.93
CIT1YNR001C UPS3Q04006 179 aa3.01□□□□□ -1.93
CIT1YNR001C BEM2P39960 2167 aaKnown RBP3□□□□□ -1.93
CIT1YNR001C POR1P04840 283 aaKnown RBP3□□□□□ -1.93
CIT1YNR001C MRS4P23500 304 aa3□□□□□ -1.93
CIT1YNR001C YHR180WP38868 163 aa3□□□□□ -1.93
CIT1YNR001C BDH1P39714 382 aa3□□□□□ -1.93
CIT1YNR001C EDC2P40023 145 aaPredicted RBP3□□□□□ -1.93
CIT1YNR001C MRPL49P40858 161 aaPredicted RBP3□□□□□ -1.93
CIT1YNR001C IGD1P43598 195 aa3□□□□□ -1.93
CIT1YNR001C CAB4P53332 305 aa3□□□□□ -1.93
CIT1YNR001C GRH1Q04410 372 aaKnown RBP3□□□□□ -1.93
CIT1YNR001C SCW10Q04951 389 aa3□□□□□ -1.93
CIT1YNR001C YPR174CQ06616 221 aaPredicted RBP3□□□□□ -1.93
CIT1YNR001C CSI2Q08054 341 aa3□□□□□ -1.93
CIT1YNR001C YPL264CQ08980 353 aa3□□□□□ -1.93
CIT1YNR001C MCP1Q12106 302 aa3□□□□□ -1.93
CIT1YNR001C YPS3Q12303 508 aa3□□□□□ -1.93
CIT1YNR001C PRR2Q12310 699 aa3□□□□□ -1.93
CIT1YNR001C YER078W-AQ3E7A2 54 aa3□□□□□ -1.93
CIT1YNR001C YLR365WQ7LIF2 110 aa3□□□□□ -1.93
CIT1YNR001C YPR170W-BP0C5R9 85 aa2.99□□□□□ -1.93
CIT1YNR001C TIR1P10863 254 aa2.99□□□□□ -1.93
CIT1YNR001C HSP12P22943 109 aaKnown RBP2.99□□□□□ -1.93
CIT1YNR001C YKR070WP36151 352 aaKnown RBP2.99□□□□□ -1.93
CIT1YNR001C PAU7P39545 55 aa2.99□□□□□ -1.93
CIT1YNR001C YGL230CP53074 147 aa2.99□□□□□ -1.93
CIT1YNR001C GIS2P53849 153 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
CIT1YNR001C BUD25P85052 153 aa2.99□□□□□ -1.93
CIT1YNR001C YOR376WQ08900 122 aa2.99□□□□□ -1.93
CIT1YNR001C YDL157CQ12082 118 aa2.99□□□□□ -1.93
CIT1YNR001C RPL30P14120 105 aaKnown RBP2.98□□□□□ -1.93
CIT1YNR001C SCO1P23833 295 aa2.98□□□□□ -1.93
CIT1YNR001C YKR041WP36134 250 aa2.98□□□□□ -1.93
CIT1YNR001C ATX1P38636 73 aa2.98□□□□□ -1.93
CIT1YNR001C MIG3P39943 394 aa2.98□□□□□ -1.93
CIT1YNR001C NCE101Q02820 53 aa2.98□□□□□ -1.93
CIT1YNR001C YMR244WQ04018 355 aa2.98□□□□□ -1.93
CIT1YNR001C TSA2Q04120 196 aa2.98□□□□□ -1.93
CIT1YNR001C SDH7Q04401 133 aa2.98□□□□□ -1.93
CIT1YNR001C API2Q04413 109 aa2.98□□□□□ -1.93
CIT1YNR001C YMR317WQ04893 1140 aa2.98□□□□□ -1.93
CIT1YNR001C YOL160WQ08321 113 aa2.98□□□□□ -1.93
CIT1YNR001C MSA1Q08471 629 aa2.98□□□□□ -1.93
CIT1YNR001C YIL102C-AQ2V2P5 75 aa2.98□□□□□ -1.93
CIT1YNR001C NOP1P15646 327 aaKnown RBP2.97□□□□□ -1.93
CIT1YNR001C AHT1P29589 182 aa2.97□□□□□ -1.93
CIT1YNR001C YKL044WP36092 106 aa2.97□□□□□ -1.93
CIT1YNR001C OM14P38325 134 aa2.97□□□□□ -1.93
CIT1YNR001C SNU13P39990 126 aaKnown RBP2.97□□□□□ -1.93
CIT1YNR001C CCS1P40202 249 aaKnown RBP2.97□□□□□ -1.93
CIT1YNR001C REE1P40893 198 aa2.97□□□□□ -1.93
CIT1YNR001C YNL184CP53876 108 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms