RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W VMA16P23968 213 aa3.01□□□□□ -1.93
USA1YML029W NTF2P33331 125 aaKnown RBP3.01□□□□□ -1.93
USA1YML029W YPT10P38146 199 aa3.01□□□□□ -1.93
USA1YML029W ATG8P38182 117 aaRIP-Chip data3.01□□□□□ -1.93not detected
USA1YML029W LSM2P38203 95 aaKnown RBP3.01□□□□□ -1.93
USA1YML029W YHR173CP38864 112 aa3.01□□□□□ -1.93
USA1YML029W YIP3P53633 176 aa3.01□□□□□ -1.93
USA1YML029W FIT2Q08906 153 aa3.01□□□□□ -1.93
USA1YML029W GLE2P40066 365 aa3.01□□□□□ -1.93
USA1YML029W VMA21P41806 77 aa3.01□□□□□ -1.93
USA1YML029W ALG13P53178 202 aa3.01□□□□□ -1.93
USA1YML029W YLR118CQ12354 227 aa3.01□□□□□ -1.93
USA1YML029W UGX2P32772 223 aa3□□□□□ -1.93
USA1YML029W SNU13P39990 126 aaKnown RBP3□□□□□ -1.93
USA1YML029W ERG28P40030 148 aa3□□□□□ -1.93
USA1YML029W GPI2P46961 280 aa3□□□□□ -1.93
USA1YML029W YDR274CP87283 123 aa3□□□□□ -1.93
USA1YML029W YPL080CQ02826 108 aa3□□□□□ -1.93
USA1YML029W ZEO1Q08245 113 aa3□□□□□ -1.93
USA1YML029W CCW12Q12127 133 aa3□□□□□ -1.93
USA1YML029W CPT1P17898 393 aa3□□□□□ -1.93
USA1YML029W MIG1P27705 504 aa3□□□□□ -1.93
USA1YML029W TIR2P33890 251 aa3□□□□□ -1.93
USA1YML029W SPI1P40092 148 aa3□□□□□ -1.93
USA1YML029W YIL163CP40448 117 aa3□□□□□ -1.93
USA1YML029W PAU15P40585 124 aa3□□□□□ -1.93
USA1YML029W AIM24P47127 394 aa3□□□□□ -1.93
USA1YML029W DAN1P47178 298 aa3□□□□□ -1.93
USA1YML029W DAD3P69850 94 aa3□□□□□ -1.93
USA1YML029W YMR181CQ03231 154 aa3□□□□□ -1.93
USA1YML029W IZH1Q03419 316 aa3□□□□□ -1.93
USA1YML029W YER175W-AQ8TGU4 54 aa3□□□□□ -1.93
USA1YML029W RPL12AP0CX53 165 aaKnown RBP2.99□□□□□ -1.93
USA1YML029W RPL12BP0CX54 165 aa2.99□□□□□ -1.93
USA1YML029W TIR1P10863 254 aa2.99□□□□□ -1.93
USA1YML029W RPB3P16370 318 aaKnown RBP2.99□□□□□ -1.93
USA1YML029W SRP21P32342 167 aa2.99□□□□□ -1.93
USA1YML029W HSP10P38910 106 aa2.99□□□□□ -1.93
USA1YML029W YAR1P46683 200 aa2.99□□□□□ -1.93
USA1YML029W HIT1P46973 164 aa2.99□□□□□ -1.93
USA1YML029W MOG1P47123 218 aa2.99□□□□□ -1.93
USA1YML029W MGA1P53050 456 aa2.99□□□□□ -1.93
USA1YML029W ATP19P81451 68 aa2.99□□□□□ -1.93
USA1YML029W FMP49A0A023PZB3 126 aa2.99□□□□□ -1.93
USA1YML029W YGR149WP48236 432 aa2.99□□□□□ -1.93
USA1YML029W TOM7P53507 60 aa2.99□□□□□ -1.93
USA1YML029W RAV2Q03956 351 aa2.99□□□□□ -1.93
USA1YML029W UPS3Q04006 179 aa2.99□□□□□ -1.93
USA1YML029W YLR281CQ05863 155 aa2.99□□□□□ -1.93
USA1YML029W ATP16Q12165 160 aa2.99□□□□□ -1.93
USA1YML029W YLR342W-AQ3E810 57 aa2.99□□□□□ -1.93
USA1YML029W NHP6AP11632 93 aaKnown RBP2.98□□□□□ -1.93
USA1YML029W NSE4P43124 402 aa2.98□□□□□ -1.93
USA1YML029W YNL184CP53876 108 aa2.98□□□□□ -1.93
USA1YML029W NAT3Q06504 195 aa2.98□□□□□ -1.93
USA1YML029W SNU23Q12368 194 aaPredicted RBP2.98□□□□□ -1.93
USA1YML029W YOP1Q12402 180 aa2.98□□□□□ -1.93
USA1YML029W POF1P25576 258 aa2.98□□□□□ -1.93
USA1YML029W SRP14P38985 146 aa2.98□□□□□ -1.93
USA1YML029W MBB1P39534 108 aa2.98□□□□□ -1.93
USA1YML029W HUA1P40325 198 aa2.98□□□□□ -1.93
USA1YML029W GTT1P40582 234 aa2.98□□□□□ -1.93
USA1YML029W UBC11P52492 156 aa2.98□□□□□ -1.93
USA1YML029W SMT3Q12306 101 aaKnown RBP2.98□□□□□ -1.93
USA1YML029W YLR122CQ12312 125 aa2.98□□□□□ -1.93
USA1YML029W DCN1Q12395 269 aa2.98□□□□□ -1.93
USA1YML029W YFR057WP43625 151 aa2.97□□□□□ -1.93
USA1YML029W APS2Q00381 147 aa2.97□□□□□ -1.93
USA1YML029W GRH1Q04410 372 aaKnown RBP2.97□□□□□ -1.93
USA1YML029W YPR013CQ12145 317 aa2.97□□□□□ -1.93
USA1YML029W AIM29P36154 155 aa2.97□□□□□ -1.93
USA1YML029W YBR013CP38215 129 aa2.97□□□□□ -1.93
USA1YML029W UIP3P39547 235 aa2.97□□□□□ -1.93
USA1YML029W MRPL49P40858 161 aaPredicted RBP2.97□□□□□ -1.93
USA1YML029W YCH1P42937 148 aa2.97□□□□□ -1.93
USA1YML029W YOL160WQ08321 113 aa2.97□□□□□ -1.93
USA1YML029W ECM33P38248 429 aaKnown RBP2.96□□□□□ -1.93
USA1YML029W YBR090CP38253 122 aa2.96□□□□□ -1.93
USA1YML029W VHS2P40463 436 aa2.96□□□□□ -1.93
USA1YML029W PAU5P43575 122 aa2.96□□□□□ -1.93
USA1YML029W LCB3P47013 409 aa2.96□□□□□ -1.93
USA1YML029W VPS71Q03433 280 aa2.96□□□□□ -1.93
USA1YML029W YOR105WQ08504 108 aa2.96□□□□□ -1.93
USA1YML029W RPL31BP0C2H9 113 aaKnown RBP2.96□□□□□ -1.94
USA1YML029W RPS11AP0CX47 156 aaKnown RBP2.96□□□□□ -1.94
USA1YML029W RPS11BP0CX48 156 aaKnown RBP2.96□□□□□ -1.94
USA1YML029W YGL010WP25338 174 aa2.96□□□□□ -1.94
USA1YML029W QRI5P32344 111 aa2.96□□□□□ -1.94
USA1YML029W SEC72P39742 193 aaKnown RBP2.96□□□□□ -1.94
USA1YML029W YGR026WP53217 278 aa2.96□□□□□ -1.94
USA1YML029W CAX4P53223 239 aa2.96□□□□□ -1.94
USA1YML029W MRPS8Q03799 155 aa2.96□□□□□ -1.94
USA1YML029W HMRA1P0CY11 126 aa2.95□□□□□ -1.94
USA1YML029W YMR244WQ04018 355 aa2.95□□□□□ -1.94
USA1YML029W UTP20P35194 2493 aaKnown RBP2.95□□□□□ -1.94
USA1YML029W VAR1P02381 398 aa2.95□□□□□ -1.94
USA1YML029W PAU19P0CE85 124 aa2.95□□□□□ -1.94
USA1YML029W PAU21P0CE86 164 aa2.95□□□□□ -1.94
USA1YML029W PAU22P0CE87 164 aa2.95□□□□□ -1.94
USA1YML029W RPL2AP0CX45 254 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms