RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C TDA4P47153 279 aa1.39□□□□□ -2.19
VPS35YJL154C BUD25P85052 153 aa1.39□□□□□ -2.19
VPS35YJL154C YCL001W-AP87012 153 aa1.39□□□□□ -2.19
VPS35YJL154C MCP1Q12106 302 aa1.39□□□□□ -2.19
VPS35YJL154C YPR014CQ6B0W2 109 aa1.39□□□□□ -2.19
VPS35YJL154C ATP5P09457 212 aa1.39□□□□□ -2.19
VPS35YJL154C RPL43AP0CX25 92 aaKnown RBP1.39□□□□□ -2.19
VPS35YJL154C RPL43BP0CX26 92 aa1.39□□□□□ -2.19
VPS35YJL154C TOM40P23644 387 aaKnown RBP1.39□□□□□ -2.19
VPS35YJL154C YJL218WP40892 196 aaKnown RBP1.39□□□□□ -2.19
VPS35YJL154C GEP7P53171 287 aa1.39□□□□□ -2.19
VPS35YJL154C SAY1P53324 424 aa1.39□□□□□ -2.19
VPS35YJL154C ELC1Q03071 99 aa1.39□□□□□ -2.19
VPS35YJL154C SML1Q04964 104 aa1.39□□□□□ -2.19
VPS35YJL154C TDA8Q6B2U8 126 aa1.39□□□□□ -2.19
VPS35YJL154C YFR032C-BQ8TGU2 87 aa1.39□□□□□ -2.19
VPS35YJL154C HTL1Q9URQ5 78 aa1.39□□□□□ -2.19
VPS35YJL154C FKS1P38631 1876 aaKnown RBP1.39□□□□□ -2.19
VPS35YJL154C UBC5P15732 148 aa1.39□□□□□ -2.19
VPS35YJL154C UTP30P36144 274 aaKnown RBP1.39□□□□□ -2.19
VPS35YJL154C GAA1P39012 614 aa1.39□□□□□ -2.19
VPS35YJL154C YAR068WP39564 161 aa1.39□□□□□ -2.19
VPS35YJL154C FIS1P40515 155 aa1.39□□□□□ -2.19
VPS35YJL154C DOC1P53068 250 aa1.39□□□□□ -2.19
VPS35YJL154C SGA1P08019 549 aa1.38□□□□□ -2.19
VPS35YJL154C SCM4P32564 187 aa1.38□□□□□ -2.19
VPS35YJL154C YAR029WP39549 74 aa1.38□□□□□ -2.19
VPS35YJL154C AVT2P39981 480 aa1.38□□□□□ -2.19
VPS35YJL154C ARC15P40518 154 aaRIP-Chip data1.38□□□□□ -2.19not detected
VPS35YJL154C UPS1Q05776 175 aa1.38□□□□□ -2.19
VPS35YJL154C UIP4Q08926 304 aa1.38□□□□□ -2.19
VPS35YJL154C YPL162CQ12042 273 aa1.38□□□□□ -2.19
VPS35YJL154C ATO3Q12359 275 aa1.38□□□□□ -2.19
VPS35YJL154C YLR412C-AQ3E742 68 aa1.38□□□□□ -2.19
VPS35YJL154C MRPL44P19956 98 aa1.38□□□□□ -2.19
VPS35YJL154C SPC25P40014 221 aa1.38□□□□□ -2.19
VPS35YJL154C MPM1P40364 252 aa1.38□□□□□ -2.19
VPS35YJL154C CUP9P41817 306 aa1.38□□□□□ -2.19
VPS35YJL154C PAM16P42949 149 aa1.38□□□□□ -2.19
VPS35YJL154C GNA1P43577 159 aaPredicted RBP1.38□□□□□ -2.19
VPS35YJL154C LPP1Q04396 274 aa1.38□□□□□ -2.19
VPS35YJL154C YMR103CQ04436 120 aa1.38□□□□□ -2.19
VPS35YJL154C ATG10Q07879 167 aa1.38□□□□□ -2.19
VPS35YJL154C RAD28Q12021 506 aa1.38□□□□□ -2.19
VPS35YJL154C RPB3P16370 318 aaKnown RBP1.37□□□□□ -2.19
VPS35YJL154C HSP12P22943 109 aaKnown RBP1.37□□□□□ -2.19
VPS35YJL154C MRS4P23500 304 aa1.37□□□□□ -2.19
VPS35YJL154C YCL042WP25572 119 aa1.37□□□□□ -2.19
VPS35YJL154C AHT1P29589 182 aa1.37□□□□□ -2.19
VPS35YJL154C MSA2P36157 363 aa1.37□□□□□ -2.19
VPS35YJL154C PHS1P40857 217 aa1.37□□□□□ -2.19
VPS35YJL154C BAT2P47176 376 aaKnown RBP1.37□□□□□ -2.19
VPS35YJL154C YGR026WP53217 278 aa1.37□□□□□ -2.19
VPS35YJL154C GAS3Q03655 524 aa1.37□□□□□ -2.19
VPS35YJL154C MSB2P32334 1306 aa1.37□□□□□ -2.19
VPS35YJL154C VMA11P32842 164 aa1.37□□□□□ -2.19
VPS35YJL154C NSG1P38837 291 aa1.37□□□□□ -2.19
VPS35YJL154C CCS1P40202 249 aaKnown RBP1.37□□□□□ -2.19
VPS35YJL154C YMR252CQ04814 134 aa1.37□□□□□ -2.19
VPS35YJL154C YOR268CQ08734 132 aa1.37□□□□□ -2.19
VPS35YJL154C NIP7Q08962 181 aaKnown RBP1.37□□□□□ -2.19
VPS35YJL154C YOR020W-AQ3E824 90 aa1.37□□□□□ -2.19
VPS35YJL154C FYV4P38783 130 aaPredicted RBP1.36□□□□□ -2.19
VPS35YJL154C GAT4P40569 121 aa1.36□□□□□ -2.19
VPS35YJL154C YFL019CP43576 117 aa1.36□□□□□ -2.19
VPS35YJL154C YGL193CP53097 103 aa1.36□□□□□ -2.19
VPS35YJL154C ERV14P53173 138 aa1.36□□□□□ -2.19
VPS35YJL154C RGM1Q00453 211 aa1.36□□□□□ -2.19
VPS35YJL154C EST3Q03096 181 aa1.36□□□□□ -2.19
VPS35YJL154C SWC7Q06707 132 aa1.36□□□□□ -2.19
VPS35YJL154C RPL13AQ12690 199 aaPredicted RBP1.36□□□□□ -2.19
VPS35YJL154C DDP1Q99321 188 aaKnown RBP1.36□□□□□ -2.19
VPS35YJL154C SRB6P32570 121 aa1.36□□□□□ -2.19
VPS35YJL154C EMP24P32803 203 aaKnown RBP1.36□□□□□ -2.19
VPS35YJL154C SFT2P38166 215 aa1.36□□□□□ -2.19
VPS35YJL154C HTD2P38790 280 aaKnown RBP1.36□□□□□ -2.19
VPS35YJL154C YHR125WP38831 101 aa1.36□□□□□ -2.19
VPS35YJL154C YER134CP40081 178 aa1.36□□□□□ -2.19
VPS35YJL154C RPL13BP40212 199 aaKnown RBP1.36□□□□□ -2.19
VPS35YJL154C RSM10Q03201 203 aa1.36□□□□□ -2.19
VPS35YJL154C YDR102CQ03864 110 aa1.36□□□□□ -2.19
VPS35YJL154C SHH3Q04487 196 aa1.36□□□□□ -2.19
VPS35YJL154C KEI1Q06346 221 aa1.36□□□□□ -2.19
VPS35YJL154C ANT1Q06497 328 aa1.36□□□□□ -2.19
VPS35YJL154C YOL014WQ08110 124 aa1.36□□□□□ -2.19
VPS35YJL154C MED11Q99278 115 aa1.36□□□□□ -2.19
VPS35YJL154C RPL26AP05743 127 aaKnown RBP1.35□□□□□ -2.19
VPS35YJL154C YHR032W-AP0C5N6 59 aa1.35□□□□□ -2.19
VPS35YJL154C DDR48P18899 430 aaKnown RBP1.35□□□□□ -2.19
VPS35YJL154C ATP15P21306 62 aa1.35□□□□□ -2.19
VPS35YJL154C YCR050CP25630 102 aa1.35□□□□□ -2.19
VPS35YJL154C CLB6P32943 380 aa1.35□□□□□ -2.19
VPS35YJL154C HPA3P39979 161 aa1.35□□□□□ -2.19
VPS35YJL154C EMC4P53073 190 aa1.35□□□□□ -2.19
VPS35YJL154C RPL26BP53221 127 aaKnown RBP1.35□□□□□ -2.19
VPS35YJL154C YPR174CQ06616 221 aaPredicted RBP1.35□□□□□ -2.19
VPS35YJL154C GPI11Q06636 219 aa1.35□□□□□ -2.19
VPS35YJL154C YDR524C-BQ3E6R4 66 aa1.35□□□□□ -2.19
VPS35YJL154C YOR376W-AQ3E805 51 aa1.35□□□□□ -2.19
VPS35YJL154C YML100W-AQ8TGT0 57 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 69.3 ms