RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W RAF1Q06891 181 aa2.11□□□□□ -2.07
PTI1YGR156W RAD28Q12021 506 aa2.11□□□□□ -2.07
PTI1YGR156W YOR214CQ12282 236 aa2.11□□□□□ -2.07
PTI1YGR156W YHR086W-AQ3E746 53 aa2.11□□□□□ -2.07
PTI1YGR156W TMA19P35691 167 aaKnown RBP2.1□□□□□ -2.07
PTI1YGR156W YKR045CP36138 183 aa2.1□□□□□ -2.07
PTI1YGR156W NQM1P53228 333 aaPredicted RBP2.1□□□□□ -2.07
PTI1YGR156W SAY1P53324 424 aa2.1□□□□□ -2.07
PTI1YGR156W YPR202WQ08993 238 aa2.1□□□□□ -2.07
PTI1YGR156W YOR381W-AQ3E804 55 aa2.1□□□□□ -2.07
PTI1YGR156W YBR220CP38318 560 aa2.09□□□□□ -2.07
PTI1YGR156W THG1P53215 237 aaKnown RBP2.09□□□□□ -2.07
PTI1YGR156W MIX14Q04341 121 aa2.09□□□□□ -2.07
PTI1YGR156W MHF1Q3E835 90 aa2.09□□□□□ -2.07
PTI1YGR156W YER135CP40082 130 aa2.08□□□□□ -2.08
PTI1YGR156W DLS1P40366 167 aa2.08□□□□□ -2.08
PTI1YGR156W GLR1P41921 483 aaKnown RBP2.08□□□□□ -2.08
PTI1YGR156W LSM1P47017 172 aaKnown RBP2.08□□□□□ -2.08
PTI1YGR156W YKR005CQ02203 525 aa2.08□□□□□ -2.08
PTI1YGR156W NCE101Q02820 53 aa2.08□□□□□ -2.08
PTI1YGR156W YPR013CQ12145 317 aa2.08□□□□□ -2.08
PTI1YGR156W PST2Q12335 198 aaKnown RBP2.08□□□□□ -2.08
PTI1YGR156W CYR1P08678 2026 aaKnown RBP2.08□□□□□ -2.08
PTI1YGR156W DYN1P36022 4092 aa2.07□□□□□ -2.08
PTI1YGR156W RPL2AP0CX45 254 aaKnown RBP2.07□□□□□ -2.08
PTI1YGR156W RPL2BP0CX46 254 aaKnown RBP2.07□□□□□ -2.08
PTI1YGR156W HSP30P25619 332 aa2.07□□□□□ -2.08
PTI1YGR156W BUB2P26448 306 aaPredicted RBP2.07□□□□□ -2.08
PTI1YGR156W YHL018WP38744 120 aaPredicted RBP2.07□□□□□ -2.08
PTI1YGR156W SBH1P52870 82 aa2.07□□□□□ -2.08
PTI1YGR156W YDR476CQ03362 224 aa2.07□□□□□ -2.08
PTI1YGR156W YLR162WQ06235 118 aa2.07□□□□□ -2.08
PTI1YGR156W PRP11Q07350 266 aaPredicted RBP2.07□□□□□ -2.08
PTI1YGR156W YOR015WQ12169 119 aa2.07□□□□□ -2.08
PTI1YGR156W ACP1P32463 125 aa2.06□□□□□ -2.08
PTI1YGR156W SRP102P36057 244 aaPredicted RBP2.06□□□□□ -2.08
PTI1YGR156W YPL073CP40323 161 aa2.06□□□□□ -2.08
PTI1YGR156W PAC10P48363 199 aa2.06□□□□□ -2.08
PTI1YGR156W YDR102CQ03864 110 aa2.06□□□□□ -2.08
PTI1YGR156W YDR278CQ05612 105 aa2.06□□□□□ -2.08
PTI1YGR156W BLM10P43583 2143 aa2.05□□□□□ -2.08
PTI1YGR156W ATP5P09457 212 aa2.05□□□□□ -2.08
PTI1YGR156W PBI2P0CT04 75 aaKnown RBP2.05□□□□□ -2.08
PTI1YGR156W PET54P10834 293 aa2.05□□□□□ -2.08
PTI1YGR156W RPL30P14120 105 aaKnown RBP2.05□□□□□ -2.08
PTI1YGR156W UPS2P35200 230 aa2.05□□□□□ -2.08
PTI1YGR156W YRA2P36036 203 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
PTI1YGR156W FIP1P45976 327 aa2.05□□□□□ -2.08
PTI1YGR156W SIP18P50263 79 aa2.05□□□□□ -2.08
PTI1YGR156W VPS28Q02767 242 aa2.05□□□□□ -2.08
PTI1YGR156W IRC19Q07843 230 aa2.05□□□□□ -2.08
PTI1YGR156W COX8P04039 78 aa2.04□□□□□ -2.08
PTI1YGR156W RAD6P06104 172 aa2.04□□□□□ -2.08
PTI1YGR156W SFK1P35735 353 aa2.04□□□□□ -2.08
PTI1YGR156W ETR1P38071 380 aa2.04□□□□□ -2.08
PTI1YGR156W YBR219CP38317 127 aa2.04□□□□□ -2.08
PTI1YGR156W IPI1P38803 334 aaPredicted RBP2.04□□□□□ -2.08
PTI1YGR156W YIR020CP40575 100 aa2.04□□□□□ -2.08
PTI1YGR156W DML1Q03652 475 aa2.04□□□□□ -2.08
PTI1YGR156W PKR1Q03880 122 aaKnown RBP2.04□□□□□ -2.08
PTI1YGR156W RIM9Q04734 239 aa2.04□□□□□ -2.08
PTI1YGR156W SYM1Q06563 197 aa2.04□□□□□ -2.08
PTI1YGR156W YMR030W-AQ3E760 96 aa2.04□□□□□ -2.08
PTI1YGR156W HSP150P32478 413 aa2.03□□□□□ -2.08
PTI1YGR156W YER181CP40097 107 aa2.03□□□□□ -2.08
PTI1YGR156W NSE4P43124 402 aa2.03□□□□□ -2.08
PTI1YGR156W YFL051CP43552 160 aa2.03□□□□□ -2.08
PTI1YGR156W RCE1Q03530 315 aa2.03□□□□□ -2.08
PTI1YGR156W CSN9Q03981 162 aa2.03□□□□□ -2.08
PTI1YGR156W YMR320WQ04897 101 aa2.03□□□□□ -2.08
PTI1YGR156W FIT2Q08906 153 aa2.03□□□□□ -2.08
PTI1YGR156W URA2P07259 2214 aaKnown RBP2.03□□□□□ -2.08
PTI1YGR156W CDC39P25655 2108 aaKnown RBP2.02□□□□□ -2.09
PTI1YGR156W SUA7P29055 345 aaPredicted RBP2.02□□□□□ -2.09
PTI1YGR156W GSP2P32836 220 aaKnown RBP2.02□□□□□ -2.09
PTI1YGR156W HPA3P39979 161 aa2.02□□□□□ -2.09
PTI1YGR156W MPM1P40364 252 aa2.02□□□□□ -2.09
PTI1YGR156W FLX1P40464 311 aa2.02□□□□□ -2.09
PTI1YGR156W YHP1Q04116 353 aa2.02□□□□□ -2.09
PTI1YGR156W YDR391CQ04170 232 aa2.02□□□□□ -2.09
PTI1YGR156W CSI2Q08054 341 aa2.02□□□□□ -2.09
PTI1YGR156W YGR035W-AQ45U48 73 aa2.02□□□□□ -2.09
PTI1YGR156W YOL162WP0CF19 215 aa2.01□□□□□ -2.09
PTI1YGR156W YGL010WP25338 174 aa2.01□□□□□ -2.09
PTI1YGR156W RPL13BP40212 199 aaKnown RBP2.01□□□□□ -2.09
PTI1YGR156W HHT1P61830 136 aa2.01□□□□□ -2.09
PTI1YGR156W MET31Q03081 177 aa2.01□□□□□ -2.09
PTI1YGR156W UPS1Q05776 175 aa2.01□□□□□ -2.09
PTI1YGR156W YHR007C-AQ07074 71 aa2.01□□□□□ -2.09
PTI1YGR156W RTR2Q12378 196 aa2.01□□□□□ -2.09
PTI1YGR156W RPL13AQ12690 199 aaPredicted RBP2.01□□□□□ -2.09
PTI1YGR156W RPS1BP23248 255 aaKnown RBP2□□□□□ -2.09
PTI1YGR156W HTD2P38790 280 aaKnown RBP2□□□□□ -2.09
PTI1YGR156W RIO2P40160 425 aaKnown RBP2□□□□□ -2.09
PTI1YGR156W YAE1P47118 141 aaPredicted RBP2□□□□□ -2.09
PTI1YGR156W CCC1P47818 322 aa2□□□□□ -2.09
PTI1YGR156W GEP7P53171 287 aa2□□□□□ -2.09
PTI1YGR156W GRX5Q02784 150 aa2□□□□□ -2.09
PTI1YGR156W YPD1Q07688 167 aa2□□□□□ -2.09
PTI1YGR156W ATG41Q12048 136 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms