RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C SRP14P38985 146 aa2.54□□□□□ -2
CDC40YDR364C LST8P41318 303 aa2.54□□□□□ -2
CDC40YDR364C YJR015WP47090 510 aa2.54□□□□□ -2
CDC40YDR364C MIC27P50945 234 aa2.54□□□□□ -2
CDC40YDR364C MMS2P53152 137 aa2.54□□□□□ -2
CDC40YDR364C PAU4P53427 120 aa2.54□□□□□ -2
CDC40YDR364C MIX17Q03667 156 aa2.54□□□□□ -2
CDC40YDR364C DXO1Q06349 442 aa2.54□□□□□ -2
CDC40YDR364C PAU1P0CE88 120 aa2.53□□□□□ -2
CDC40YDR364C PAU14P0CE89 120 aa2.53□□□□□ -2
CDC40YDR364C PAU6P0CE90 120 aa2.53□□□□□ -2
CDC40YDR364C PAU18P0CE91 120 aa2.53□□□□□ -2
CDC40YDR364C PAU8P0CE92 120 aa2.53□□□□□ -2
CDC40YDR364C PAU11P0CE93 120 aa2.53□□□□□ -2
CDC40YDR364C PHO85P17157 305 aa2.53□□□□□ -2
CDC40YDR364C SEC59P20048 519 aa2.53□□□□□ -2
CDC40YDR364C TOM40P23644 387 aaKnown RBP2.53□□□□□ -2
CDC40YDR364C VMA11P32842 164 aa2.53□□□□□ -2
CDC40YDR364C YBL071CP38185 102 aa2.53□□□□□ -2
CDC40YDR364C DER1P38307 211 aa2.53□□□□□ -2
CDC40YDR364C YPT31P38555 223 aaKnown RBP2.53□□□□□ -2
CDC40YDR364C PAU13P38725 120 aa2.53□□□□□ -2
CDC40YDR364C SUR2P38992 349 aa2.53□□□□□ -2
CDC40YDR364C MOG1P47123 218 aa2.53□□□□□ -2
CDC40YDR364C YGL118CP53132 145 aa2.53□□□□□ -2
CDC40YDR364C BOR1P53838 576 aa2.53□□□□□ -2
CDC40YDR364C PAU10Q03050 120 aa2.53□□□□□ -2
CDC40YDR364C SNO1Q03144 224 aa2.53□□□□□ -2
CDC40YDR364C SHH3Q04487 196 aa2.53□□□□□ -2
CDC40YDR364C AVO2Q04749 426 aa2.53□□□□□ -2
CDC40YDR364C YMR253CQ04835 414 aa2.53□□□□□ -2
CDC40YDR364C MCH1Q07376 486 aa2.53□□□□□ -2
CDC40YDR364C ZEO1Q08245 113 aa2.53□□□□□ -2
CDC40YDR364C PAU20Q08322 120 aa2.53□□□□□ -2
CDC40YDR364C RAD28Q12021 506 aa2.53□□□□□ -2
CDC40YDR364C FCY1Q12178 158 aa2.53□□□□□ -2
CDC40YDR364C PAU9Q3E770 120 aa2.53□□□□□ -2
CDC40YDR364C YBL008W-AQ3E821 79 aa2.53□□□□□ -2
CDC40YDR364C RPL14AP36105 138 aaKnown RBP2.52□□□□□ -2.01
CDC40YDR364C PRY2P36110 329 aa2.52□□□□□ -2.01
CDC40YDR364C RPL14BP38754 138 aaKnown RBP2.52□□□□□ -2.01
CDC40YDR364C EDC2P40023 145 aaPredicted RBP2.52□□□□□ -2.01
CDC40YDR364C PGD1P40356 397 aa2.52□□□□□ -2.01
CDC40YDR364C HHO1P53551 258 aa2.52□□□□□ -2.01
CDC40YDR364C YIP3P53633 176 aa2.52□□□□□ -2.01
CDC40YDR364C SWT21P53873 357 aaPredicted RBP2.52□□□□□ -2.01
CDC40YDR364C YAL063C-AQ3E791 96 aa2.52□□□□□ -2.01
CDC40YDR364C CDC39P25655 2108 aaKnown RBP2.52□□□□□ -2.01
CDC40YDR364C SOD1P00445 154 aaKnown RBP2.51□□□□□ -2.01
CDC40YDR364C FPR2P32472 135 aa2.51□□□□□ -2.01
CDC40YDR364C MRPS9P38120 278 aa2.51□□□□□ -2.01
CDC40YDR364C ATG8P38182 117 aaRIP-Chip data2.51□□□□□ -2.01not detected
CDC40YDR364C RRT1P38192 103 aa2.51□□□□□ -2.01
CDC40YDR364C YAR068WP39564 161 aa2.51□□□□□ -2.01
CDC40YDR364C VMA21P41806 77 aa2.51□□□□□ -2.01
CDC40YDR364C NSE4P43124 402 aa2.51□□□□□ -2.01
CDC40YDR364C OST3P48439 350 aa2.51□□□□□ -2.01
CDC40YDR364C DSK2P48510 373 aa2.51□□□□□ -2.01
CDC40YDR364C SDH7Q04401 133 aa2.51□□□□□ -2.01
CDC40YDR364C YPR145C-AQ2V2P0 78 aa2.51□□□□□ -2.01
CDC40YDR364C SEC16P48415 2195 aaKnown RBP2.51□□□□□ -2.01
CDC40YDR364C CDC7P06243 507 aa2.5□□□□□ -2.01
CDC40YDR364C ADH3P07246 375 aaKnown RBP2.5□□□□□ -2.01
CDC40YDR364C RPS22AP0C0W1 130 aaKnown RBP2.5□□□□□ -2.01
CDC40YDR364C RPB3P16370 318 aaKnown RBP2.5□□□□□ -2.01
CDC40YDR364C HSP12P22943 109 aaKnown RBP2.5□□□□□ -2.01
CDC40YDR364C SUA7P29055 345 aaPredicted RBP2.5□□□□□ -2.01
CDC40YDR364C MRPL38P35996 138 aaPredicted RBP2.5□□□□□ -2.01
CDC40YDR364C YKR045CP36138 183 aa2.5□□□□□ -2.01
CDC40YDR364C TRS20P38334 175 aa2.5□□□□□ -2.01
CDC40YDR364C BDH1P39714 382 aa2.5□□□□□ -2.01
CDC40YDR364C RRT13P40042 185 aa2.5□□□□□ -2.01
CDC40YDR364C PHS1P40857 217 aa2.5□□□□□ -2.01
CDC40YDR364C HST4P53688 370 aa2.5□□□□□ -2.01
CDC40YDR364C RPB9P27999 122 aa2.49□□□□□ -2.01
CDC40YDR364C SMP1P38128 452 aa2.49□□□□□ -2.01
CDC40YDR364C DOG2P38773 246 aa2.49□□□□□ -2.01
CDC40YDR364C DOG1P38774 246 aa2.49□□□□□ -2.01
CDC40YDR364C HSP10P38910 106 aa2.49□□□□□ -2.01
CDC40YDR364C CYB5P40312 120 aa2.49□□□□□ -2.01
CDC40YDR364C GTT1P40582 234 aa2.49□□□□□ -2.01
CDC40YDR364C TOS8P53147 276 aa2.49□□□□□ -2.01
CDC40YDR364C DAD3P69850 94 aa2.49□□□□□ -2.01
CDC40YDR364C NAT3Q06504 195 aa2.49□□□□□ -2.01
CDC40YDR364C IRC23Q08416 157 aa2.49□□□□□ -2.01
CDC40YDR364C MSA1Q08471 629 aa2.49□□□□□ -2.01
CDC40YDR364C FMP49A0A023PZB3 126 aa2.49□□□□□ -2.01
CDC40YDR364C YCL042WP25572 119 aa2.49□□□□□ -2.01
CDC40YDR364C MRPL28P36527 147 aa2.49□□□□□ -2.01
CDC40YDR364C SDH4P37298 181 aa2.49□□□□□ -2.01
CDC40YDR364C SFT2P38166 215 aa2.49□□□□□ -2.01
CDC40YDR364C YBL081WP38180 368 aaKnown RBP2.49□□□□□ -2.01
CDC40YDR364C LSM2P38203 95 aaKnown RBP2.49□□□□□ -2.01
CDC40YDR364C CSH1P38287 376 aa2.49□□□□□ -2.01
CDC40YDR364C AME1P38313 324 aa2.49□□□□□ -2.01
CDC40YDR364C YER188WP40103 239 aa2.49□□□□□ -2.01
CDC40YDR364C YIL163CP40448 117 aa2.49□□□□□ -2.01
CDC40YDR364C PAU15P40585 124 aa2.49□□□□□ -2.01
CDC40YDR364C GPI2P46961 280 aa2.49□□□□□ -2.01
CDC40YDR364C DAN1P47178 298 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms