RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C DYN2Q02647 92 aa3.55□□□□□ -1.84
NUP42YDR192C YDR114CQ04597 100 aa3.55□□□□□ -1.84
NUP42YDR192C YMR253CQ04835 414 aa3.55□□□□□ -1.84
NUP42YDR192C CSI2Q08054 341 aa3.55□□□□□ -1.84
NUP42YDR192C SMT3Q12306 101 aaKnown RBP3.55□□□□□ -1.84
NUP42YDR192C DCN1Q12395 269 aa3.55□□□□□ -1.84
NUP42YDR192C MID2P36027 376 aa3.54□□□□□ -1.84
NUP42YDR192C YKL070WP36087 169 aa3.54□□□□□ -1.84
NUP42YDR192C CUE1P38428 203 aa3.54□□□□□ -1.84
NUP42YDR192C LST8P41318 303 aa3.54□□□□□ -1.84
NUP42YDR192C VMA21P41806 77 aa3.54□□□□□ -1.84
NUP42YDR192C UBC7Q02159 165 aa3.54□□□□□ -1.84
NUP42YDR192C MRX11Q03079 207 aa3.54□□□□□ -1.84
NUP42YDR192C AVO2Q04749 426 aa3.54□□□□□ -1.84
NUP42YDR192C LOA1Q06508 300 aa3.54□□□□□ -1.84
NUP42YDR192C YLR118CQ12354 227 aa3.54□□□□□ -1.84
NUP42YDR192C PAU19P0CE85 124 aa3.53□□□□□ -1.84
NUP42YDR192C PAU21P0CE86 164 aa3.53□□□□□ -1.84
NUP42YDR192C PAU22P0CE87 164 aa3.53□□□□□ -1.84
NUP42YDR192C DDI2P0CH63 225 aa3.53□□□□□ -1.84
NUP42YDR192C DDI3P0CH64 225 aa3.53□□□□□ -1.84
NUP42YDR192C MRPL20P22354 195 aaPredicted RBP3.53□□□□□ -1.84
NUP42YDR192C RNA15P25299 296 aaPredicted RBP3.53□□□□□ -1.84
NUP42YDR192C PAU3P25610 124 aa3.53□□□□□ -1.84
NUP42YDR192C ZRT1P32804 376 aa3.53□□□□□ -1.84
NUP42YDR192C PRS4P38063 326 aaPredicted RBP3.53□□□□□ -1.84
NUP42YDR192C YHR173CP38864 112 aa3.53□□□□□ -1.84
NUP42YDR192C BDH1P39714 382 aa3.53□□□□□ -1.84
NUP42YDR192C LSM4P40070 187 aaKnown RBP3.53□□□□□ -1.84
NUP42YDR192C GPI2P46961 280 aa3.53□□□□□ -1.84
NUP42YDR192C YGL185CP53100 379 aa3.53□□□□□ -1.84
NUP42YDR192C SNO1Q03144 224 aa3.53□□□□□ -1.84
NUP42YDR192C CTR3Q06686 241 aa3.53□□□□□ -1.84
NUP42YDR192C HTB2P02294 131 aa3.52□□□□□ -1.85
NUP42YDR192C SFT2P38166 215 aa3.52□□□□□ -1.85
NUP42YDR192C YER085CP40058 173 aa3.52□□□□□ -1.85
NUP42YDR192C YIL012WP40551 113 aa3.52□□□□□ -1.85
NUP42YDR192C PAU5P43575 122 aa3.52□□□□□ -1.85
NUP42YDR192C HIT1P46973 164 aa3.52□□□□□ -1.85
NUP42YDR192C DAN1P47178 298 aa3.52□□□□□ -1.85
NUP42YDR192C YPL080CQ02826 108 aa3.52□□□□□ -1.85
NUP42YDR192C YMR007WQ03675 126 aa3.52□□□□□ -1.85
NUP42YDR192C YOR105WQ08504 108 aa3.52□□□□□ -1.85
NUP42YDR192C POM33Q12164 279 aa3.52□□□□□ -1.85
NUP42YDR192C POC4Q12245 148 aaPredicted RBP3.52□□□□□ -1.85
NUP42YDR192C UTP23Q12339 254 aaKnown RBP3.52□□□□□ -1.85
NUP42YDR192C MRS1P07266 363 aa3.51□□□□□ -1.85
NUP42YDR192C HMRA1P0CY11 126 aa3.51□□□□□ -1.85
NUP42YDR192C POF1P25576 258 aa3.51□□□□□ -1.85
NUP42YDR192C MRPL38P35996 138 aaPredicted RBP3.51□□□□□ -1.85
NUP42YDR192C SDH4P37298 181 aa3.51□□□□□ -1.85
NUP42YDR192C RPB11P38902 120 aa3.51□□□□□ -1.85
NUP42YDR192C YPR145C-AQ2V2P0 78 aa3.51□□□□□ -1.85
NUP42YDR192C COA6Q3E846 104 aa3.51□□□□□ -1.85
NUP42YDR192C SOD1P00445 154 aaKnown RBP3.5□□□□□ -1.85
NUP42YDR192C NTF2P33331 125 aaKnown RBP3.5□□□□□ -1.85
NUP42YDR192C AME1P38313 324 aa3.5□□□□□ -1.85
NUP42YDR192C POR2P40478 281 aa3.5□□□□□ -1.85
NUP42YDR192C NSE4P43124 402 aa3.5□□□□□ -1.85
NUP42YDR192C CAB4P53332 305 aa3.5□□□□□ -1.85
NUP42YDR192C SWT21P53873 357 aaPredicted RBP3.5□□□□□ -1.85
NUP42YDR192C ATP19P81451 68 aa3.5□□□□□ -1.85
NUP42YDR192C UPS3Q04006 179 aa3.5□□□□□ -1.85
NUP42YDR192C NAT3Q06504 195 aa3.5□□□□□ -1.85
NUP42YDR192C YPL162CQ12042 273 aa3.5□□□□□ -1.85
NUP42YDR192C YOR029WQ12243 111 aa3.5□□□□□ -1.85
NUP42YDR192C YOR097CQ12274 175 aaPredicted RBP3.5□□□□□ -1.85
NUP42YDR192C YMR316C-AI2HB70 103 aa3.49□□□□□ -1.85
NUP42YDR192C MRS4P23500 304 aa3.49□□□□□ -1.85
NUP42YDR192C RPB9P27999 122 aa3.49□□□□□ -1.85
NUP42YDR192C VMA11P32842 164 aa3.49□□□□□ -1.85
NUP42YDR192C SNF11P38956 169 aa3.49□□□□□ -1.85
NUP42YDR192C YER188WP40103 239 aa3.49□□□□□ -1.85
NUP42YDR192C YNL194CP40169 301 aa3.49□□□□□ -1.85
NUP42YDR192C DSK2P48510 373 aa3.49□□□□□ -1.85
NUP42YDR192C YGR026WP53217 278 aa3.49□□□□□ -1.85
NUP42YDR192C CPD1P53314 239 aa3.49□□□□□ -1.85
NUP42YDR192C HST4P53688 370 aa3.49□□□□□ -1.85
NUP42YDR192C SPG4Q04438 115 aa3.49□□□□□ -1.85
NUP42YDR192C PBP4Q07362 185 aaKnown RBP3.49□□□□□ -1.85
NUP42YDR192C PRM3Q08931 133 aa3.49□□□□□ -1.85
NUP42YDR192C DAD1Q12248 94 aa3.49□□□□□ -1.85
NUP42YDR192C ATO3Q12359 275 aa3.49□□□□□ -1.85
NUP42YDR192C RPS22BQ3E7Y3 130 aaKnown RBP3.49□□□□□ -1.85
NUP42YDR192C DYN1P36022 4092 aa3.49□□□□□ -1.85
NUP42YDR192C SAL1D6W196 494 aa3.48□□□□□ -1.85
NUP42YDR192C TIR1P10863 254 aa3.48□□□□□ -1.85
NUP42YDR192C YGL010WP25338 174 aa3.48□□□□□ -1.85
NUP42YDR192C RPL16BP26785 198 aaKnown RBP3.48□□□□□ -1.85
NUP42YDR192C SRP21P32342 167 aa3.48□□□□□ -1.85
NUP42YDR192C QRI5P32344 111 aa3.48□□□□□ -1.85
NUP42YDR192C MIC12P38341 106 aa3.48□□□□□ -1.85
NUP42YDR192C PAU7P39545 55 aa3.48□□□□□ -1.85
NUP42YDR192C LSM8P47093 109 aaKnown RBP3.48□□□□□ -1.85
NUP42YDR192C SDS23P53172 527 aa3.48□□□□□ -1.85
NUP42YDR192C FYV6P53913 173 aa3.48□□□□□ -1.85
NUP42YDR192C YHP1Q04116 353 aa3.48□□□□□ -1.85
NUP42YDR192C GIM5Q04493 163 aa3.48□□□□□ -1.85
NUP42YDR192C FIT2Q08906 153 aa3.48□□□□□ -1.85
NUP42YDR192C CSM4Q08955 156 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 48 ms