RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAT1	YCR077C	MSI1	P13712	422 aa		5.01	□□□□□ -1.61
PAT1	YCR077C	RPL30	P14120	105 aa	Known RBP	5.01	□□□□□ -1.61
PAT1	YCR077C	RPS27A	P35997	82 aa	Known RBP	5.01	□□□□□ -1.61
PAT1	YCR077C	RPS27B	P38711	82 aa		5.01	□□□□□ -1.61
PAT1	YCR077C	CIS3	P47001	227 aa		5.01	□□□□□ -1.61
PAT1	YCR077C	SMT3	Q12306	101 aa	Known RBP	5.01	□□□□□ -1.61
PAT1	YCR077C	POL2	P21951	2222 aa	Known RBP	5.01	□□□□□ -1.61
PAT1	YCR077C	FYV4	P38783	130 aa	Predicted RBP	5.01	□□□□□ -1.61
PAT1	YCR077C	ARP3	P47117	449 aa	Known RBP	5.01	□□□□□ -1.61
PAT1	YCR077C	YGR050C	P53231	118 aa		5.01	□□□□□ -1.61
PAT1	YCR077C	CPD1	P53314	239 aa		5.01	□□□□□ -1.61
PAT1	YCR077C	SUN4	P53616	420 aa		5.01	□□□□□ -1.61
PAT1	YCR077C	YDR102C	Q03864	110 aa		5.01	□□□□□ -1.61
PAT1	YCR077C	HPF1	Q05164	967 aa		5.01	□□□□□ -1.61
PAT1	YCR077C	YOR186W	Q08560	144 aa		5.01	□□□□□ -1.61
PAT1	YCR077C	YHR214C-E	Q8TGK0	99 aa		5.01	□□□□□ -1.61
PAT1	YCR077C	ECM12	O13529	151 aa		5	□□□□□ -1.61
PAT1	YCR077C	SOD1	P00445	154 aa	Known RBP	5	□□□□□ -1.61
PAT1	YCR077C	PAM17	P36147	197 aa		5	□□□□□ -1.61
PAT1	YCR077C	HSK3	P69852	69 aa		5	□□□□□ -1.61
PAT1	YCR077C	YOL118C	Q08259	102 aa		5	□□□□□ -1.61
PAT1	YCR077C	YOR292C	Q08743	309 aa		5	□□□□□ -1.61
PAT1	YCR077C	FMP27	Q06179	2628 aa		5	□□□□□ -1.61
PAT1	YCR077C	DFG10	P40526	253 aa		5	□□□□□ -1.61
PAT1	YCR077C	HNT2	P49775	206 aa		5	□□□□□ -1.61
PAT1	YCR077C	GEP7	P53171	287 aa		5	□□□□□ -1.61
PAT1	YCR077C	YCR085W	P25650	117 aa		4.99	□□□□□ -1.61
PAT1	YCR077C	YIL163C	P40448	117 aa		4.99	□□□□□ -1.61
PAT1	YCR077C	NIP7	Q08962	181 aa	Known RBP	4.99	□□□□□ -1.61
PAT1	YCR077C	YAL064W-B	O13512	126 aa		4.99	□□□□□ -1.61
PAT1	YCR077C	QRI5	P32344	111 aa		4.99	□□□□□ -1.61
PAT1	YCR077C	REC104	P33323	182 aa		4.99	□□□□□ -1.61
PAT1	YCR077C	MRPS5	P33759	307 aa		4.99	□□□□□ -1.61
PAT1	YCR077C	SRX1	P36077	127 aa		4.99	□□□□□ -1.61
PAT1	YCR077C	YML079W	Q03629	201 aa		4.99	□□□□□ -1.61
PAT1	YCR077C	YMR103C	Q04436	120 aa		4.99	□□□□□ -1.61
PAT1	YCR077C	UPS1	Q05776	175 aa		4.99	□□□□□ -1.61
PAT1	YCR077C	YOR192C-C	Q3E736	78 aa		4.99	□□□□□ -1.61
PAT1	YCR077C	ENV10	Q99382	181 aa		4.99	□□□□□ -1.61
PAT1	YCR077C	COF1	Q03048	143 aa	Known RBP	4.98	□□□□□ -1.61
PAT1	YCR077C	LPP1	Q04396	274 aa		4.98	□□□□□ -1.61
PAT1	YCR077C	FAS1	P07149	2051 aa	Known RBP	4.98	□□□□□ -1.61
PAT1	YCR077C	SEC16	P48415	2195 aa	Known RBP	4.98	□□□□□ -1.61
PAT1	YCR077C	NHP2	P32495	156 aa	Predicted RBP	4.97	□□□□□ -1.61
PAT1	YCR077C	GLE2	P40066	365 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	SFT1	P43682	97 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	PCP1	P53259	346 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	GPI19	Q04082	140 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	YDR119W-A	Q2V2P9	66 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	BLM10	P43583	2143 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	KRE1	P17260	313 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	MID2	P36027	376 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	SNF11	P38956	169 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	DSK2	P48510	373 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	MIC27	P50945	234 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	YGR219W	P53307	113 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	YNR064C	P53750	290 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	RIM9	Q04734	239 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	RXT3	Q07458	294 aa		4.97	□□□□□ -1.61
PAT1	YCR077C	MPD1	Q12404	318 aa	Known RBP	4.97	□□□□□ -1.61
PAT1	YCR077C	PRP46	Q12417	451 aa	Predicted RBP	4.97	□□□□□ -1.61
PAT1	YCR077C	CDC39	P25655	2108 aa	Known RBP	4.96	□□□□□ -1.62
PAT1	YCR077C	BRP1	P53194	125 aa		4.96	□□□□□ -1.62
PAT1	YCR077C	CAX4	P53223	239 aa		4.96	□□□□□ -1.62
PAT1	YCR077C	YFH1	Q07540	174 aa		4.96	□□□□□ -1.62
PAT1	YCR077C	YPS3	Q12303	508 aa		4.96	□□□□□ -1.62
PAT1	YCR077C	YAL063C-A	Q3E791	96 aa		4.96	□□□□□ -1.62
PAT1	YCR077C	BOL1	Q3E793	110 aa		4.96	□□□□□ -1.62
PAT1	YCR077C	TOM40	P23644	387 aa	Known RBP	4.96	□□□□□ -1.62
PAT1	YCR077C	MMS2	P53152	137 aa		4.96	□□□□□ -1.62
PAT1	YCR077C	TRS23	Q03784	219 aa		4.96	□□□□□ -1.62
PAT1	YCR077C	DAD1	Q12248	94 aa		4.96	□□□□□ -1.62
PAT1	YCR077C	TOR2	P32600	2474 aa	Known RBP	4.95	□□□□□ -1.62
PAT1	YCR077C	HEM4	P06174	275 aa		4.95	□□□□□ -1.62
PAT1	YCR077C	MDM10	P18409	493 aa		4.95	□□□□□ -1.62
PAT1	YCR077C	MST28	P39552	234 aa		4.95	□□□□□ -1.62
PAT1	YCR077C	YER079W	P40052	210 aa	Known RBP	4.95	□□□□□ -1.62
PAT1	YCR077C	YGL118C	P53132	145 aa		4.95	□□□□□ -1.62
PAT1	YCR077C	SWS2	P53937	143 aa		4.95	□□□□□ -1.62
PAT1	YCR077C	YDL180W	Q12301	547 aa		4.95	□□□□□ -1.62
PAT1	YCR077C	KTI11	Q3E840	82 aa		4.95	□□□□□ -1.62
PAT1	YCR077C	RPS2	P25443	254 aa	Known RBP	4.94	□□□□□ -1.62
PAT1	YCR077C	SDC1	Q03323	175 aa		4.94	□□□□□ -1.62
PAT1	YCR077C	YMR254C	Q04838	102 aa		4.94	□□□□□ -1.62
PAT1	YCR077C	ACC1	Q00955	2233 aa	Known RBP	4.94	□□□□□ -1.62
PAT1	YCR077C	YKR073C	P36153	106 aa		4.94	□□□□□ -1.62
PAT1	YCR077C	TDA4	P47153	279 aa		4.94	□□□□□ -1.62
PAT1	YCR077C	SWT21	P53873	357 aa	Predicted RBP	4.94	□□□□□ -1.62
PAT1	YCR077C	YDR042C	Q03205	200 aa		4.94	□□□□□ -1.62
PAT1	YCR077C	YNL200C	P40165	246 aa	Known RBP	4.93	□□□□□ -1.62
PAT1	YCR077C	YCR050C	P25630	102 aa		4.93	□□□□□ -1.62
PAT1	YCR077C	IMP1	P28627	190 aa		4.93	□□□□□ -1.62
PAT1	YCR077C	ATP19	P81451	68 aa		4.93	□□□□□ -1.62
PAT1	YCR077C	YOR097C	Q12274	175 aa	Predicted RBP	4.93	□□□□□ -1.62
PAT1	YCR077C	HFA1	P32874	2273 aa		4.93	□□□□□ -1.62
PAT1	YCR077C	ROX3	P25046	220 aa		4.92	□□□□□ -1.62
PAT1	YCR077C	YPS1	P32329	569 aa		4.92	□□□□□ -1.62
PAT1	YCR077C	YIL086C	P40503	102 aa		4.92	□□□□□ -1.62
PAT1	YCR077C	VPS71	Q03433	280 aa		4.92	□□□□□ -1.62
PAT1	YCR077C	HPA2	Q06592	156 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 106.5 ms