RNA–Protein interactions for RNA: YBR127C

VMA2, Transcript of Subunit B of V1 peripheral membrane domain of vacuolar H+-ATPase, yeastyeast

Gene VMA2, Length 1,554 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA2YBR127C COF1Q03048 143 aaKnown RBP5.38□□□□□ -1.55
VMA2YBR127C YDR042CQ03205 200 aa5.38□□□□□ -1.55
VMA2YBR127C SDC1Q03323 175 aa5.38□□□□□ -1.55
VMA2YBR127C YMR007WQ03675 126 aa5.38□□□□□ -1.55
VMA2YBR127C ROT1Q03691 256 aa5.38□□□□□ -1.55
VMA2YBR127C KSH1Q8TGJ3 72 aa5.38□□□□□ -1.55
VMA2YBR127C YHR140WP38842 239 aa5.37□□□□□ -1.55
VMA2YBR127C LYS1P38998 373 aaRIP-Chip data5.37□□□□□ -1.55not detected
VMA2YBR127C YER181CP40097 107 aa5.37□□□□□ -1.55
VMA2YBR127C MCH4Q08268 501 aa5.37□□□□□ -1.55
VMA2YBR127C RPS21BQ3E754 87 aaKnown RBP5.37□□□□□ -1.55
VMA2YBR127C YMR175W-AQ3E766 64 aa5.37□□□□□ -1.55
VMA2YBR127C Q0255P03881 472 aa5.36□□□□□ -1.55
VMA2YBR127C RPB8P20436 146 aa5.36□□□□□ -1.55
VMA2YBR127C REC104P33323 182 aa5.36□□□□□ -1.55
VMA2YBR127C NRG2P38082 220 aa5.36□□□□□ -1.55
VMA2YBR127C ECM34P38728 170 aa5.36□□□□□ -1.55
VMA2YBR127C TIM17P39515 158 aa5.36□□□□□ -1.55
VMA2YBR127C VPS55P47111 140 aa5.36□□□□□ -1.55
VMA2YBR127C MRX11Q03079 207 aa5.36□□□□□ -1.55
VMA2YBR127C RAF1Q06891 181 aa5.36□□□□□ -1.55
VMA2YBR127C YPS3Q12303 508 aa5.36□□□□□ -1.55
VMA2YBR127C YPL038W-AQ3E7B4 63 aa5.36□□□□□ -1.55
VMA2YBR127C YCR006CP25350 157 aa5.35□□□□□ -1.55
VMA2YBR127C YHL042WP38729 150 aa5.35□□□□□ -1.55
VMA2YBR127C YHL018WP38744 120 aaPredicted RBP5.35□□□□□ -1.55
VMA2YBR127C SDS23P53172 527 aa5.35□□□□□ -1.55
VMA2YBR127C GPI19Q04082 140 aa5.35□□□□□ -1.55
VMA2YBR127C YBR255C-AQ3E776 120 aa5.35□□□□□ -1.55
VMA2YBR127C YNL277W-AQ3E7Z0 62 aa5.35□□□□□ -1.55
VMA2YBR127C RPL23AP0CX41 137 aaKnown RBP5.34□□□□□ -1.55
VMA2YBR127C RPL23BP0CX42 137 aaKnown RBP5.34□□□□□ -1.55
VMA2YBR127C RFA2P26754 273 aaKnown RBP5.34□□□□□ -1.55
VMA2YBR127C YPS1P32329 569 aa5.34□□□□□ -1.55
VMA2YBR127C SMP1P38128 452 aa5.34□□□□□ -1.55
VMA2YBR127C CSH1P38287 376 aa5.34□□□□□ -1.55
VMA2YBR127C TRP1P00912 224 aa5.33□□□□□ -1.56
VMA2YBR127C RPS21AP0C0V8 87 aaKnown RBP5.33□□□□□ -1.56
VMA2YBR127C TIM12P32830 109 aa5.33□□□□□ -1.56
VMA2YBR127C SFT2P38166 215 aa5.33□□□□□ -1.56
VMA2YBR127C GPI18P38211 433 aa5.33□□□□□ -1.56
VMA2YBR127C SKI6P46948 246 aaPredicted RBP5.33□□□□□ -1.56
VMA2YBR127C MMS2P53152 137 aa5.33□□□□□ -1.56
VMA2YBR127C YMR317WQ04893 1140 aa5.33□□□□□ -1.56
VMA2YBR127C RXT3Q07458 294 aa5.33□□□□□ -1.56
VMA2YBR127C YOR186WQ08560 144 aa5.33□□□□□ -1.56
VMA2YBR127C DAD1Q12248 94 aa5.33□□□□□ -1.56
VMA2YBR127C YHR139C-AO13536 103 aa5.33□□□□□ -1.56
VMA2YBR127C PIS1P06197 220 aaKnown RBP5.33□□□□□ -1.56
VMA2YBR127C IMP1P28627 190 aa5.33□□□□□ -1.56
VMA2YBR127C FZF1P32805 299 aa5.33□□□□□ -1.56
VMA2YBR127C JJJ3P47138 172 aa5.33□□□□□ -1.56
VMA2YBR127C PAD1P33751 242 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
VMA2YBR127C GGC1P38988 300 aa5.32□□□□□ -1.56
VMA2YBR127C YEL067CP39978 195 aa5.32□□□□□ -1.56
VMA2YBR127C TIM18Q08749 192 aa5.32□□□□□ -1.56
VMA2YBR127C SUT2Q12286 268 aa5.32□□□□□ -1.56
VMA2YBR127C RPS2P25443 254 aaKnown RBP5.31□□□□□ -1.56
VMA2YBR127C IES6P32617 166 aa5.31□□□□□ -1.56
VMA2YBR127C YPI1P43587 155 aa5.31□□□□□ -1.56
VMA2YBR127C MOT3P54785 490 aaKnown RBP5.31□□□□□ -1.56
VMA2YBR127C IRC25Q07951 179 aa5.31□□□□□ -1.56
VMA2YBR127C MIM1Q08176 113 aa5.31□□□□□ -1.56
VMA2YBR127C YLR365WQ7LIF2 110 aa5.31□□□□□ -1.56
VMA2YBR127C APS1P35181 156 aa5.3□□□□□ -1.56
VMA2YBR127C SGN1P40561 250 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
VMA2YBR127C FIP1P45976 327 aa5.3□□□□□ -1.56
VMA2YBR127C YNR077CP53758 84 aa5.3□□□□□ -1.56
VMA2YBR127C HSK3P69852 69 aa5.3□□□□□ -1.56
VMA2YBR127C LSM6Q06406 86 aaKnown RBP5.3□□□□□ -1.56
VMA2YBR127C HUG1Q6Q5K6 68 aa5.3□□□□□ -1.56
VMA2YBR127C PBI2P0CT04 75 aaKnown RBP5.29□□□□□ -1.56
VMA2YBR127C LST8P41318 303 aa5.29□□□□□ -1.56
VMA2YBR127C YJR115WP47152 169 aa5.29□□□□□ -1.56
VMA2YBR127C TDA7P53882 636 aaPredicted RBP5.29□□□□□ -1.56
VMA2YBR127C YPR108W-AQ3E7B3 70 aa5.29□□□□□ -1.56
VMA2YBR127C RPS26AP39938 119 aaKnown RBP5.29□□□□□ -1.56
VMA2YBR127C RPS26BP39939 119 aaKnown RBP5.29□□□□□ -1.56
VMA2YBR127C YER079WP40052 210 aaKnown RBP5.29□□□□□ -1.56
VMA2YBR127C ATP19P81451 68 aa5.29□□□□□ -1.56
VMA2YBR127C SHH4Q06236 168 aa5.29□□□□□ -1.56
VMA2YBR127C MRS3P10566 314 aa5.28□□□□□ -1.56
VMA2YBR127C ROX3P25046 220 aa5.28□□□□□ -1.56
VMA2YBR127C DSS4P32601 143 aa5.28□□□□□ -1.56
VMA2YBR127C YLR281CQ05863 155 aa5.28□□□□□ -1.56
VMA2YBR127C GAT3Q07928 141 aa5.28□□□□□ -1.56
VMA2YBR127C RLM1Q12224 676 aa5.28□□□□□ -1.56
VMA2YBR127C YPR064WQ12492 139 aa5.28□□□□□ -1.56
VMA2YBR127C HTL1Q9URQ5 78 aa5.28□□□□□ -1.56
VMA2YBR127C MBB1P39534 108 aa5.27□□□□□ -1.57
VMA2YBR127C MST27P53176 234 aa5.27□□□□□ -1.57
VMA2YBR127C YDR381C-AQ3E6R5 114 aa5.27□□□□□ -1.57
VMA2YBR127C RPL28P02406 149 aaKnown RBP5.26□□□□□ -1.57
VMA2YBR127C YDL022C-AP0C5L6 82 aa5.26□□□□□ -1.57
VMA2YBR127C PCL5P38794 229 aa5.26□□□□□ -1.57
VMA2YBR127C YHR180WP38868 163 aa5.26□□□□□ -1.57
VMA2YBR127C PET8P38921 284 aa5.26□□□□□ -1.57
VMA2YBR127C RRT13P40042 185 aa5.26□□□□□ -1.57
VMA2YBR127C YGR050CP53231 118 aa5.26□□□□□ -1.57
VMA2YBR127C PET191Q02772 108 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 79.6 ms