RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	FEX2	Q08991	375 aa		3.06	□□□□□ -1.92
SPN1	YPR133C	YCT1	Q12235	531 aa		3.06	□□□□□ -1.92
SPN1	YPR133C	TPI1	P00942	248 aa	Known RBP	3.05	□□□□□ -1.92
SPN1	YPR133C	RRT1	P38192	103 aa		3.05	□□□□□ -1.92
SPN1	YPR133C	PEX22	P39718	180 aa		3.05	□□□□□ -1.92
SPN1	YPR133C	SNU13	P39990	126 aa	Known RBP	3.05	□□□□□ -1.92
SPN1	YPR133C	MGA1	P53050	456 aa		3.05	□□□□□ -1.92
SPN1	YPR133C	YPS5	P53057	165 aa		3.05	□□□□□ -1.92
SPN1	YPR133C	MSO1	P53604	210 aa	Known RBP	3.05	□□□□□ -1.92
SPN1	YPR133C	KEI1	Q06346	221 aa		3.05	□□□□□ -1.92
SPN1	YPR133C	YGL258W-A	Q3E740	77 aa		3.05	□□□□□ -1.92
SPN1	YPR133C	MRPL27	P36526	146 aa	Predicted RBP	3.04	□□□□□ -1.92
SPN1	YPR133C	HTD2	P38790	280 aa	Known RBP	3.04	□□□□□ -1.92
SPN1	YPR133C	LSM12	P38828	187 aa	Known RBP	3.04	□□□□□ -1.92
SPN1	YPR133C	HAC1	P41546	238 aa		3.04	□□□□□ -1.92
SPN1	YPR133C	YJR085C	P47131	105 aa	Known RBP	3.04	□□□□□ -1.92
SPN1	YPR133C	NIF3	P53081	288 aa		3.04	□□□□□ -1.92
SPN1	YPR133C	ATP16	Q12165	160 aa		3.04	□□□□□ -1.92
SPN1	YPR133C	DCN1	Q12395	269 aa		3.04	□□□□□ -1.92
SPN1	YPR133C	YOR011W-A	Q3E807	68 aa		3.04	□□□□□ -1.92
SPN1	YPR133C	PET20	Q99373	253 aa		3.04	□□□□□ -1.92
SPN1	YPR133C	MRPL20	P22354	195 aa	Predicted RBP	3.03	□□□□□ -1.92
SPN1	YPR133C	CPR4	P25334	318 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	RNP1	P32385	249 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	NTF2	P33331	125 aa	Known RBP	3.03	□□□□□ -1.92
SPN1	YPR133C	YBL071C	P38185	102 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	FMP23	P38231	175 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	VMA22	P38784	181 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	SEC72	P39742	193 aa	Known RBP	3.03	□□□□□ -1.92
SPN1	YPR133C	CAT5	P41735	233 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	YFL067W	P43537	175 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	YJL027C	P47063	138 aa	Predicted RBP	3.03	□□□□□ -1.92
SPN1	YPR133C	SGF11	Q03067	99 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	EST3	Q03096	181 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	ARC18	Q05933	178 aa	Known RBP	3.03	□□□□□ -1.92
SPN1	YPR133C	SYM1	Q06563	197 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	YLR031W	Q07978	186 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	VAM10	Q08474	114 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	SNU23	Q12368	194 aa	Predicted RBP	3.03	□□□□□ -1.92
SPN1	YPR133C	ATG5	Q12380	294 aa		3.03	□□□□□ -1.92
SPN1	YPR133C	LDS1	P31379	325 aa		3.02	□□□□□ -1.93
SPN1	YPR133C	SNF11	P38956	169 aa		3.02	□□□□□ -1.93
SPN1	YPR133C	ILM1	P47155	203 aa		3.02	□□□□□ -1.93
SPN1	YPR133C	DYN2	Q02647	92 aa		3.02	□□□□□ -1.93
SPN1	YPR133C	YMR244W	Q04018	355 aa		3.02	□□□□□ -1.93
SPN1	YPR133C	THI74	Q04083	370 aa		3.02	□□□□□ -1.93
SPN1	YPR133C	LOA1	Q06508	300 aa		3.02	□□□□□ -1.93
SPN1	YPR133C	YPR195C	Q06594	109 aa		3.02	□□□□□ -1.93
SPN1	YPR133C	SCP1	Q08873	200 aa		3.02	□□□□□ -1.93
SPN1	YPR133C	RPL28	P02406	149 aa	Known RBP	3.01	□□□□□ -1.93
SPN1	YPR133C	POP8	P38208	133 aa		3.01	□□□□□ -1.93
SPN1	YPR133C	GOS1	P38736	223 aa		3.01	□□□□□ -1.93
SPN1	YPR133C	GLE2	P40066	365 aa		3.01	□□□□□ -1.93
SPN1	YPR133C	GPI2	P46961	280 aa		3.01	□□□□□ -1.93
SPN1	YPR133C	SNX4	P47057	423 aa		3.01	□□□□□ -1.93
SPN1	YPR133C	BNS1	P50084	137 aa		3.01	□□□□□ -1.93
SPN1	YPR133C	YGR025W	P53216	100 aa		3.01	□□□□□ -1.93
SPN1	YPR133C	YGR050C	P53231	118 aa		3.01	□□□□□ -1.93
SPN1	YPR133C	YIP3	P53633	176 aa		3.01	□□□□□ -1.93
SPN1	YPR133C	MRPS8	Q03799	155 aa		3.01	□□□□□ -1.93
SPN1	YPR133C	PRM7	Q12459	698 aa		3.01	□□□□□ -1.93
SPN1	YPR133C	HHF1	P02309	103 aa	Known RBP	3	□□□□□ -1.93
SPN1	YPR133C	URA5	P13298	226 aa	Known RBP	3	□□□□□ -1.93
SPN1	YPR133C	YCR001W	P25347	104 aa		3	□□□□□ -1.93
SPN1	YPR133C	MBA1	P38300	278 aa		3	□□□□□ -1.93
SPN1	YPR133C	COS8	P38723	381 aa		3	□□□□□ -1.93
SPN1	YPR133C	SUR2	P38992	349 aa		3	□□□□□ -1.93
SPN1	YPR133C	YFR057W	P43625	151 aa		3	□□□□□ -1.93
SPN1	YPR133C	YGR018C	P53211	109 aa		3	□□□□□ -1.93
SPN1	YPR133C	YNR066C	P53752	436 aa		3	□□□□□ -1.93
SPN1	YPR133C	YOR283W	Q12040	230 aa	Known RBP	3	□□□□□ -1.93
SPN1	YPR133C	YNL146C-A	Q3E7Z1	64 aa		3	□□□□□ -1.93
SPN1	YPR133C	SUS1	Q6WNK7	96 aa		3	□□□□□ -1.93
SPN1	YPR133C	YCL021W-A	Q96VH3	125 aa		3	□□□□□ -1.93
SPN1	YPR133C	BDH1	P39714	382 aa		2.99	□□□□□ -1.93
SPN1	YPR133C	NSA2	P40078	261 aa	Known RBP	2.99	□□□□□ -1.93
SPN1	YPR133C	SDS23	P53172	527 aa		2.99	□□□□□ -1.93
SPN1	YPR133C	FRQ1	Q06389	190 aa		2.99	□□□□□ -1.93
SPN1	YPR133C	YOR385W	Q08909	290 aa		2.99	□□□□□ -1.93
SPN1	YPR133C	YPL162C	Q12042	273 aa		2.99	□□□□□ -1.93
SPN1	YPR133C	YPS3	Q12303	508 aa		2.99	□□□□□ -1.93
SPN1	YPR133C	YER078W-A	Q3E7A2	54 aa		2.99	□□□□□ -1.93
SPN1	YPR133C	YHR213W	P0CI67	198 aa		2.98	□□□□□ -1.93
SPN1	YPR133C	RPS11A	P0CX47	156 aa	Known RBP	2.98	□□□□□ -1.93
SPN1	YPR133C	RPS11B	P0CX48	156 aa	Known RBP	2.98	□□□□□ -1.93
SPN1	YPR133C	CUP2	P15315	225 aa		2.98	□□□□□ -1.93
SPN1	YPR133C	PAN3	P36102	679 aa	Predicted RBP	2.98	□□□□□ -1.93
SPN1	YPR133C	CSH1	P38287	376 aa		2.98	□□□□□ -1.93
SPN1	YPR133C	MIG3	P39943	394 aa		2.98	□□□□□ -1.93
SPN1	YPR133C	YER135C	P40082	130 aa		2.98	□□□□□ -1.93
SPN1	YPR133C	YNL200C	P40165	246 aa	Known RBP	2.98	□□□□□ -1.93
SPN1	YPR133C	POG1	P40473	351 aa		2.98	□□□□□ -1.93
SPN1	YPR133C	YIR035C	P40579	254 aa		2.98	□□□□□ -1.93
SPN1	YPR133C	IMP2	P46972	177 aa		2.98	□□□□□ -1.93
SPN1	YPR133C	LSM1	P47017	172 aa	Known RBP	2.98	□□□□□ -1.93
SPN1	YPR133C	YJR015W	P47090	510 aa		2.98	□□□□□ -1.93
SPN1	YPR133C	LCL2	Q08045	131 aa		2.98	□□□□□ -1.93
SPN1	YPR133C	ERV2	Q12284	196 aa		2.98	□□□□□ -1.93
SPN1	YPR133C	YMR230W-A	Q3E7B5	62 aa		2.98	□□□□□ -1.93
SPN1	YPR133C	QCR2	P07257	368 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms