RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W YOL085CQ99345 113 aa5.45□□□□□ -1.54
HDA1YNL021W LDB16P25587 256 aa5.44□□□□□ -1.54
HDA1YNL021W YBL059WP34224 193 aa5.44□□□□□ -1.54
HDA1YNL021W PAN3P36102 679 aaPredicted RBP5.44□□□□□ -1.54
HDA1YNL021W UTP30P36144 274 aaKnown RBP5.44□□□□□ -1.54
HDA1YNL021W CGI121Q03705 181 aaKnown RBP5.44□□□□□ -1.54
HDA1YNL021W GRH1Q04410 372 aaKnown RBP5.44□□□□□ -1.54
HDA1YNL021W YOL029CQ08187 201 aa5.44□□□□□ -1.54
HDA1YNL021W FSF1Q12029 327 aaKnown RBP5.44□□□□□ -1.54
HDA1YNL021W BRR2P32639 2163 aaKnown RBP5.44□□□□□ -1.54
HDA1YNL021W FMP27Q06179 2628 aa5.44□□□□□ -1.54
HDA1YNL021W MBF1O14467 151 aaKnown RBP5.44□□□□□ -1.54
HDA1YNL021W SPS2P08459 502 aa5.44□□□□□ -1.54
HDA1YNL021W UBI4P0CG63 381 aaKnown RBP5.44□□□□□ -1.54
HDA1YNL021W TDA8Q6B2U8 126 aa5.44□□□□□ -1.54
HDA1YNL021W YOR032W-AQ8TGS1 66 aa5.44□□□□□ -1.54
HDA1YNL021W YFR032C-BQ8TGU2 87 aa5.44□□□□□ -1.54
HDA1YNL021W HFA1P32874 2273 aa5.43□□□□□ -1.54
HDA1YNL021W IGD1P43598 195 aa5.43□□□□□ -1.54
HDA1YNL021W DIE2P50076 525 aa5.43□□□□□ -1.54
HDA1YNL021W TMA23Q03525 211 aa5.43□□□□□ -1.54
HDA1YNL021W AIM36Q03798 255 aa5.43□□□□□ -1.54
HDA1YNL021W NMA1Q06178 401 aaKnown RBP5.43□□□□□ -1.54
HDA1YNL021W PRR2Q12310 699 aa5.43□□□□□ -1.54
HDA1YNL021W ATG22P25568 528 aa5.42□□□□□ -1.54
HDA1YNL021W HTD2P38790 280 aaKnown RBP5.42□□□□□ -1.54
HDA1YNL021W MRPS16Q02608 121 aa5.42□□□□□ -1.54
HDA1YNL021W LPP1Q04396 274 aa5.42□□□□□ -1.54
HDA1YNL021W MRX8Q05473 314 aa5.42□□□□□ -1.54
HDA1YNL021W MSW1P04803 379 aa5.42□□□□□ -1.54
HDA1YNL021W ADK1P07170 222 aaKnown RBP5.42□□□□□ -1.54
HDA1YNL021W RPL2AP0CX45 254 aaKnown RBP5.42□□□□□ -1.54
HDA1YNL021W RPL2BP0CX46 254 aaKnown RBP5.42□□□□□ -1.54
HDA1YNL021W YHR214C-DP0CX93 97 aa5.42□□□□□ -1.54
HDA1YNL021W PCL1P24867 279 aa5.42□□□□□ -1.54
HDA1YNL021W RPF1P38805 295 aaKnown RBP5.42□□□□□ -1.54
HDA1YNL021W YEA4P40004 342 aa5.42□□□□□ -1.54
HDA1YNL021W MNN5P46982 586 aa5.42□□□□□ -1.54
HDA1YNL021W DGA1Q08650 418 aa5.42□□□□□ -1.54
HDA1YNL021W YAL067W-AQ8TGK6 75 aa5.42□□□□□ -1.54
HDA1YNL021W MAG1P22134 296 aaKnown RBP5.41□□□□□ -1.54
HDA1YNL021W COF1Q03048 143 aaKnown RBP5.41□□□□□ -1.54
HDA1YNL021W STF2P16965 84 aa5.41□□□□□ -1.54
HDA1YNL021W CSH1P38287 376 aa5.41□□□□□ -1.54
HDA1YNL021W YPT31P38555 223 aaKnown RBP5.41□□□□□ -1.54
HDA1YNL021W YGL118CP53132 145 aa5.41□□□□□ -1.54
HDA1YNL021W KEI1Q06346 221 aa5.41□□□□□ -1.54
HDA1YNL021W MPD1Q12404 318 aaKnown RBP5.41□□□□□ -1.54
HDA1YNL021W HTL1Q9URQ5 78 aa5.41□□□□□ -1.54
HDA1YNL021W RNP1P32385 249 aa5.4□□□□□ -1.54
HDA1YNL021W MCH1Q07376 486 aa5.4□□□□□ -1.54
HDA1YNL021W SMT3Q12306 101 aaKnown RBP5.4□□□□□ -1.54
HDA1YNL021W ARO2P28777 376 aaKnown RBP5.39□□□□□ -1.55
HDA1YNL021W SWD3P38123 315 aa5.39□□□□□ -1.55
HDA1YNL021W LSM8P47093 109 aaKnown RBP5.39□□□□□ -1.55
HDA1YNL021W YTH1Q06102 208 aaPredicted RBP5.39□□□□□ -1.55
HDA1YNL021W PPT2Q12036 173 aa5.39□□□□□ -1.55
HDA1YNL021W TOM40P23644 387 aaKnown RBP5.39□□□□□ -1.55
HDA1YNL021W ASP1P38986 381 aaPredicted RBP5.39□□□□□ -1.55
HDA1YNL021W YPL162CQ12042 273 aa5.39□□□□□ -1.55
HDA1YNL021W SEC59P20048 519 aa5.38□□□□□ -1.55
HDA1YNL021W DLS1P40366 167 aa5.38□□□□□ -1.55
HDA1YNL021W SNC2P33328 115 aa5.38□□□□□ -1.55
HDA1YNL021W RRT13P40042 185 aa5.38□□□□□ -1.55
HDA1YNL021W TIR3P40552 269 aa5.38□□□□□ -1.55
HDA1YNL021W ECO1P43605 281 aa5.38□□□□□ -1.55
HDA1YNL021W XPT1P47165 209 aa5.38□□□□□ -1.55
HDA1YNL021W ACC1Q00955 2233 aaKnown RBP5.37□□□□□ -1.55
HDA1YNL021W PHO85P17157 305 aa5.37□□□□□ -1.55
HDA1YNL021W COX10P21592 462 aa5.37□□□□□ -1.55
HDA1YNL021W TEM1P38987 245 aa5.37□□□□□ -1.55
HDA1YNL021W OST2P46964 130 aa5.37□□□□□ -1.55
HDA1YNL021W HHT1P61830 136 aa5.37□□□□□ -1.55
HDA1YNL021W MIX14Q04341 121 aa5.37□□□□□ -1.55
HDA1YNL021W YFR010W-AP0C5N0 62 aa5.36□□□□□ -1.55
HDA1YNL021W SPO13P23624 291 aa5.36□□□□□ -1.55
HDA1YNL021W GLR1P41921 483 aaKnown RBP5.36□□□□□ -1.55
HDA1YNL021W RSM10Q03201 203 aa5.36□□□□□ -1.55
HDA1YNL021W MRPL27P36526 146 aaPredicted RBP5.36□□□□□ -1.55
HDA1YNL021W FCF2Q12035 217 aaPredicted RBP5.36□□□□□ -1.55
HDA1YNL021W ODC2Q99297 307 aa5.36□□□□□ -1.55
HDA1YNL021W TRS20P38334 175 aa5.35□□□□□ -1.55
HDA1YNL021W BUD25P85052 153 aa5.35□□□□□ -1.55
HDA1YNL021W DIG2Q03373 323 aaKnown RBP5.35□□□□□ -1.55
HDA1YNL021W YDR102CQ03864 110 aa5.35□□□□□ -1.55
HDA1YNL021W COA4Q05809 96 aa5.35□□□□□ -1.55
HDA1YNL021W YOR385WQ08909 290 aa5.35□□□□□ -1.55
HDA1YNL021W MDH2P22133 377 aa5.35□□□□□ -1.55
HDA1YNL021W UMP1P38293 148 aa5.35□□□□□ -1.55
HDA1YNL021W SKI6P46948 246 aaPredicted RBP5.35□□□□□ -1.55
HDA1YNL021W RSM27P53305 110 aa5.35□□□□□ -1.55
HDA1YNL021W HHO1P53551 258 aa5.35□□□□□ -1.55
HDA1YNL021W YLR118CQ12354 227 aa5.35□□□□□ -1.55
HDA1YNL021W FLO9P39712 1322 aa5.34□□□□□ -1.55
HDA1YNL021W VAR1P02381 398 aa5.34□□□□□ -1.55
HDA1YNL021W CKS1P20486 150 aaKnown RBP5.34□□□□□ -1.55
HDA1YNL021W YPL073CP40323 161 aa5.34□□□□□ -1.55
HDA1YNL021W YGR219WP53307 113 aa5.34□□□□□ -1.55
HDA1YNL021W BLM10P43583 2143 aa5.34□□□□□ -1.55
HDA1YNL021W SGA1P08019 549 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms